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CSPI03G16490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G16490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLysM domain-containing protein
Genome locationChr3:12395432..12396292
RNA-Seq ExpressionCSPI03G16490
SyntenyCSPI03G16490
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576752.1 hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4081.31Show/hide
Query:  SRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG-----DGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGL
        SR    SSR LIDVVSWYCA+ LLGLILIGSIRETSSS       G++LRGNL+T R CDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGL
Subjt:  SRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG-----DGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGL

Query:  VIKIIAS
        VIKII+S
Subjt:  VIKIIAS

KGN57357.2 hypothetical protein Csa_009741 [Cucumis sativus]7.3e-64100Show/hide
Query:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF
        MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF
Subjt:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF

Query:  PGLVIKIIASSTHINLPTSD
        PGLVIKIIASSTHINLPTSD
Subjt:  PGLVIKIIASSTHINLPTSD

XP_004150301.1 uncharacterized protein LOC101210054 [Cucumis sativus]7.3e-64100Show/hide
Query:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF
        MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF
Subjt:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF

Query:  PGLVIKIIASSTHINLPTSD
        PGLVIKIIASSTHINLPTSD
Subjt:  PGLVIKIIASSTHINLPTSD

XP_008439155.1 PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo]1.7e-5793.55Show/hide
Query:  MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP
        MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRET SSSGD GR LRGNLVTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHINLPTSD
        DDVFPGLVIKIIASSTH NLPTSD
Subjt:  DDVFPGLVIKIIASSTHINLPTSD

XP_022157015.1 uncharacterized protein LOC111023841 [Momordica charantia]3.9e-4174.79Show/hide
Query:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG----DGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP
        M G    R R    SSRP  DVVSWYCAVG+L LILIGSIRE++ S     DGRL RGNLV  RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG----DGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHIN
        DDVFPGLVIKII+SS   N
Subjt:  DDVFPGLVIKIIASSTHIN

TrEMBL top hitse value%identityAlignment
A0A0A0L5R9 LysM domain-containing protein3.5e-64100Show/hide
Query:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF
        MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF
Subjt:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVF

Query:  PGLVIKIIASSTHINLPTSD
        PGLVIKIIASSTHINLPTSD
Subjt:  PGLVIKIIASSTHINLPTSD

A0A1S3AXP2 uncharacterized protein LOC1034840368.4e-5893.55Show/hide
Query:  MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP
        MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRET SSSGD GR LRGNLVTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHINLPTSD
        DDVFPGLVIKIIASSTH NLPTSD
Subjt:  DDVFPGLVIKIIASSTHINLPTSD

A0A5A7VAP9 Peptidoglycan-binding LysM domain-containing protein8.4e-5893.55Show/hide
Query:  MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP
        MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRET SSSGD GR LRGNLVTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHINLPTSD
        DDVFPGLVIKIIASSTH NLPTSD
Subjt:  DDVFPGLVIKIIASSTHINLPTSD

A0A6J1DRZ3 uncharacterized protein LOC1110238411.9e-4174.79Show/hide
Query:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG----DGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP
        M G    R R    SSRP  DVVSWYCAVG+L LILIGSIRE++ S     DGRL RGNLV  RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG----DGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHIN
        DDVFPGLVIKII+SS   N
Subjt:  DDVFPGLVIKIIASSTHIN

A0A6J1J769 uncharacterized protein LOC1114831842.1e-4083.02Show/hide
Query:  SRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG---DG-RLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLV
        SR    SSR LIDVVSWYCAV +LGLILIGSIRETSSS    DG ++LRGNL+T R CDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLV
Subjt:  SRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSG---DG-RLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLV

Query:  IKIIAS
        IKII+S
Subjt:  IKIIAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52790.1 peptidoglycan-binding LysM domain-containing protein9.6e-2248.11Show/hide
Query:  QSSSRPLIDVVSWYCAVGLLGLILI--------GSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLV
        +SSS  + + +SWYCAV    ++L+        GS           ++ G       CDEIY V EGETL TIS+KCGDPYIVE NPHIHD DD+FPGL+
Subjt:  QSSSRPLIDVVSWYCAVGLLGLILI--------GSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLV

Query:  IKIIAS
        I+I  S
Subjt:  IKIIAS

AT4G25433.1 peptidoglycan-binding LysM domain-containing protein9.6e-3058.1Show/hide
Query:  DVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRG-NLVTW-------RPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKIIASST
        + V+ YC V LL L L GS++ ++  G G   RG N   W       RPC+E+YVVGEG+TLH+IS+KCGDP+IVERNPHIHDPDDVFPGL+IK+     
Subjt:  DVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRG-NLVTW-------RPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKIIASST

Query:  HINLP
        HINLP
Subjt:  HINLP

AT5G62150.1 peptidoglycan-binding LysM domain-containing protein2.8e-2965.52Show/hide
Query:  DVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKI
        D+ +W  AV LL LIL+ S+RE ++S     +RG+  + +PC+EIY+VGEGETLHTI DKCGDP+IVERNPHIHDPDDVFPGLV+KI
Subjt:  DVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGGCGTCTCTGTTCCCAGAAGTAGGCGGCCACAGTCGTCTTCACGACCCCTCATCGACGTCGTTTCATGGTACTGCGCCGTGGGGCTATTGGGCCTGATCTTGAT
TGGTTCCATCAGAGAAACATCCTCCTCCGGTGACGGCAGGTTGTTGAGAGGGAACTTGGTGACGTGGCGTCCCTGCGATGAGATATATGTGGTGGGAGAAGGAGAAACGC
TTCATACGATTAGCGATAAGTGCGGTGACCCGTATATCGTGGAGCGGAACCCCCATATCCATGACCCGGATGACGTTTTCCCCGGTTTGGTTATTAAAATTATAGCCTCC
TCCACCCACATAAACCTTCCAACTTCGGATTAA
mRNA sequenceShow/hide mRNA sequence
GTGGTTATTGGTAATTAGAAAGAGATGGGTGGGTGATTTTATATTTAATAGCTTTGGCGTTGGGGTTGGGAGAGAAAGTTGAGACGACTTGTAAAGTTGAAACCAATCCA
AAATGTAGAACCCCAAGTCATGGATCCGTAAGCTCAACGTCCCAACGTCATACCTCAACTTCCTCTTCTTAATTAACTTCTTTCTTCTCCTAAACCAGAAACCCACTTTA
TAAATACCCATTTTTTAATTTCTCATCTCCCAAACCACCCCCCTCCAAAATTCAGTTCCCATCCACCACCATGCCCGGCGTCTCTGTTCCCAGAAGTAGGCGGCCACAGT
CGTCTTCACGACCCCTCATCGACGTCGTTTCATGGTACTGCGCCGTGGGGCTATTGGGCCTGATCTTGATTGGTTCCATCAGAGAAACATCCTCCTCCGGTGACGGCAGG
TTGTTGAGAGGGAACTTGGTGACGTGGCGTCCCTGCGATGAGATATATGTGGTGGGAGAAGGAGAAACGCTTCATACGATTAGCGATAAGTGCGGTGACCCGTATATCGT
GGAGCGGAACCCCCATATCCATGACCCGGATGACGTTTTCCCCGGTTTGGTTATTAAAATTATAGCCTCCTCCACCCACATAAACCTTCCAACTTCGGATTAATCCAATC
CTTCTTCAATTTTATTTTATCCTTTTTTTTTTTTTTATTTAAACTCCTAAGGCCGGATAGATAGATGTGCATATGATGTCGAGGTTTGTGGATTTTTCTTTTTTAAGGAT
ATAGAGGTAAAATATATAGCTCATCTTCTTCTCTATGTATAAATAAACATCATAATTGATACATATATATCTAAGTAAATTTGTATTTTCT
Protein sequenceShow/hide protein sequence
MPGVSVPRSRRPQSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSGDGRLLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKIIAS
STHINLPTSD