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CSPI03G16800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G16800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:12617567..12619251
RNA-Seq ExpressionCSPI03G16800
SyntenyCSPI03G16800
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140781.1 uncharacterized protein LOC101217506 [Cucumis sativus]1.0e-6099.18Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
        MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRR LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV

Query:  PQMEKRAVEDEDERDHPMSPLN
        PQMEKRAVEDEDERDHPMSPLN
Subjt:  PQMEKRAVEDEDERDHPMSPLN

XP_008439192.1 PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo]6.7e-5794.26Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
        MESHVQFTQTGP WTNEKHMHFLNS+EASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSP NHTKNHPTSGSAR+NGRSTRRSRR SSPPY+STQDQVV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV

Query:  PQMEKRAVEDEDERDHPMSPLN
        PQMEK AVEDEDERDHPMSPLN
Subjt:  PQMEKRAVEDEDERDHPMSPLN

XP_022141184.1 uncharacterized protein LOC111011640 [Momordica charantia]2.9e-4478.86Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQV
        MESHVQF +TG  WTNEKHMHFLNS+EASFVRSMF+NR H RRRLRLDR LPDT+DSTLDSP    KNH TSG+A I+GRS+ RSR  SS P+TS QDQV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQV

Query:  VPQMEKRAVEDEDERDHPMSPLN
        VPQMEKRAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPLN

XP_038882732.1 uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]1.4e-4682.26Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNR-AHRRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++TGP WTNEKHMHFLNS+EASFV+SMF+NR  HRRRLRLDR LPDTADSTLDSP  + TKNH TS + RINGRS+RRSRRISS P+TSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNR-AHRRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

Query:  VVPQMEKRAVEDEDERDHPMSPLN
        VVPQ+EKRAVEDEDERDHPMSP+N
Subjt:  VVPQMEKRAVEDEDERDHPMSPLN

XP_038882735.1 uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida]2.0e-4582.26Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNR-AHRRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++TGP WTNEKHMHFLNS+EASFV+SMF+NR  HRRRLRLDR LPDTADSTLDSP  + TKNH TS + RINGRS+RRSRRISS P+TSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNR-AHRRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

Query:  VVPQMEKRAVEDEDERDHPMSPLN
        VVPQ+EKRAVEDEDERDHPMSP+N
Subjt:  VVPQMEKRAVEDEDERDHPMSPLN

TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein4.9e-6199.18Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
        MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRR LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV

Query:  PQMEKRAVEDEDERDHPMSPLN
        PQMEKRAVEDEDERDHPMSPLN
Subjt:  PQMEKRAVEDEDERDHPMSPLN

A0A1S3AYV4 uncharacterized protein LOC1034840633.3e-5794.26Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
        MESHVQFTQTGP WTNEKHMHFLNS+EASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSP NHTKNHPTSGSAR+NGRSTRRSRR SSPPY+STQDQVV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV

Query:  PQMEKRAVEDEDERDHPMSPLN
        PQMEK AVEDEDERDHPMSPLN
Subjt:  PQMEKRAVEDEDERDHPMSPLN

A0A6J1CHV7 uncharacterized protein LOC1110116401.4e-4478.86Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQV
        MESHVQF +TG  WTNEKHMHFLNS+EASFVRSMF+NR H RRRLRLDR LPDT+DSTLDSP    KNH TSG+A I+GRS+ RSR  SS P+TS QDQV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQV

Query:  VPQMEKRAVEDEDERDHPMSPLN
        VPQMEKRAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPLN

A0A6J1J606 uncharacterized protein LOC111482903 isoform X23.5e-4377.05Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
        MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRRRLRLDR L DTADSTLDSP  + K H  SG+ R++GRS+RRSRRI S P+TS QDQVV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV

Query:  PQMEKRAVEDEDERDHPMSPLN
        PQME+RAVEDEDERDHP+SP+N
Subjt:  PQMEKRAVEDEDERDHPMSPLN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X12.0e-4376.23Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV
        MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRRRLRLDR L DTADSTLDSP  + K H  S   R++GRS+RRSRRI S P+TS QDQVV
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVV

Query:  PQMEKRAVEDEDERDHPMSPLN
        PQME+RAVEDEDERDHP+SP+N
Subjt:  PQMEKRAVEDEDERDHPMSPLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCGCATGTGCAATTCACCCAAACCGGGCCGCTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCGTGGAAGCTTCTTTCGTCCGATCAATGTTCCAAAA
TCGCGCACATCGCCGCCGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACCAAAAACCATCCCACCTCCGGAAGTG
CAAGAATCAACGGTAGATCTACGAGGAGATCTAGGAGGATATCATCTCCACCGTACACTTCAACTCAAGATCAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAGGAT
GAAGATGAGAGAGACCATCCCATGTCACCTCTCAACTAG
mRNA sequenceShow/hide mRNA sequence
GGTTATAAAAAGTAGGTGAGGGAGAGAGGGAGAGAGGGTGAAAGGCGAGTAGGGGAAACACATGATTTTAATGTGTAGTCGCGTTTGAGAATTGGGAAAAAGGAAACGCC
AAAGTCGCCAACCCTATAGCTTCTCTTCTTTCTTTGTAAAAGCGCTTCTATAAAAACCAACGTAATTAAAACCCCACCAATCCAGTACATTATATTCATATCTCCCAAAC
CCATCGGAAAAGTGTTTTTTCTTCTCTTTCTTTCTTTCTTTCTTATTTCTTCTTCTTTCAATTCCTCTCCCTTCAATTTTATGTTCTCATACACACCTAATTATTAAACC
CATGGAATCGCATGTGCAATTCACCCAAACCGGGCCGCTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCGTGGAAGCTTCTTTCGTCCGATCAATGTTCCAAA
ATCGCGCACATCGCCGCCGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACCAAAAACCATCCCACCTCCGGAAGT
GCAAGAATCAACGGTAGATCTACGAGGAGATCTAGGAGGATATCATCTCCACCGTACACTTCAACTCAAGATCAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAGGA
TGAAGATGAGAGAGACCATCCCATGTCACCTCTCAACTAGCAAATATATTATTCTTCTTCTTCTTCTTCTTGGATTTTTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTT
TAATCTTTATATCTTTTCATTTTAGTTTTTAGATCTTTAATTAATTATTGTCTGAACAAACAAACAAACACAAAGATGGGTCTAATTCAGAAATTAAGTGAATTTCAATT
GGC
Protein sequenceShow/hide protein sequence
MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQVVPQMEKRAVED
EDERDHPMSPLN