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CSPI03G17710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G17710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal protein S5 domain 2-like superfamily protein
Genome locationChr3:13291031..13291279
RNA-Seq ExpressionCSPI03G17710
SyntenyCSPI03G17710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD45907.1 TPA_asm: hypothetical protein HUJ06_004137 [Nelumbo nucifera]4.5e-0446.15Show/hide
Query:  HLADLRHPPEYRQGLGRVLPEVRGRADQEENRRHSCQVRQDFTRRRSLTLRAQEVWLSWSSCQVP
        +LAD+ +  E+RQG+G VLPEVR R  +E ++ HS +VR + T   S  L+AQE+  +  SC+VP
Subjt:  HLADLRHPPEYRQGLGRVLPEVRGRADQEENRRHSCQVRQDFTRRRSLTLRAQEVWLSWSSCQVP
GFZ14124.1 ribosomal protein S5 domain 2-like superfamily protein [Actinidia rufa]1.5e-0445.21Show/hide
Query:  KGWSHLADLRHPPEYRQGLGRVL----PEVRGRADQEENRRHSCQVRQDFTRRRSLTLRAQEVWLSWSSCQVP
        KG  H + +      RQ + + L    PEVR RA QE ++ H   +R    RRRS  LRAQEVW +W SCQVP
Subjt:  KGWSHLADLRHPPEYRQGLGRVL----PEVRGRADQEENRRHSCQVRQDFTRRRSLTLRAQEVWLSWSSCQVP
TrEMBL top hitse value%identityAlignment
A0A7J0GUA5 Ribosomal protein S5 domain 2-like superfamily protein7.4e-0545.21Show/hide
Query:  KGWSHLADLRHPPEYRQGLGRVL----PEVRGRADQEENRRHSCQVRQDFTRRRSLTLRAQEVWLSWSSCQVP
        KG  H + +      RQ + + L    PEVR RA QE ++ H   +R    RRRS  LRAQEVW +W SCQVP
Subjt:  KGWSHLADLRHPPEYRQGLGRVL----PEVRGRADQEENRRHSCQVRQDFTRRRSLTLRAQEVWLSWSSCQVP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAGGTTCTCTGGTGTCGATATGCGTATCAGAGTAAAGGGTGGTCACACCTTGCAGATTTACGCCATCCGCCAGAGTATCGCCAAGGCCTTGGTCGCGTTCTACC
AGAAGTACGTGGACGAGCAGACCAAGAAGAAAATCGAAGACATTCTTGTCAGGTTCGACAGGACTTTACTCGTCGTCGATCCCTGACATTGCGAGCCCAAGAAGTTTGGT
TGTCGTGGAGCTCGTGCCAGGTTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACACAGGTTCTCTGGTGTCGATATGCGTATCAGAGTAAAGGGTGGTCACACCTTGCAGATTTACGCCATCCGCCAGAGTATCGCCAAGGCCTTGGTCGCGTTCTACC
AGAAGTACGTGGACGAGCAGACCAAGAAGAAAATCGAAGACATTCTTGTCAGGTTCGACAGGACTTTACTCGTCGTCGATCCCTGACATTGCGAGCCCAAGAAGTTTGGT
TGTCGTGGAGCTCGTGCCAGGTTCCATAA
Protein sequenceShow/hide protein sequence
MTQVLWCRYAYQSKGWSHLADLRHPPEYRQGLGRVLPEVRGRADQEENRRHSCQVRQDFTRRRSLTLRAQEVWLSWSSCQVP