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CSPI03G17940 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G17940
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAutophagy protein 5
Genome locationChr3:13600641..13605001
RNA-Seq ExpressionCSPI03G17940
SyntenyCSPI03G17940
Gene Ontology termsGO:0006749 - glutathione metabolic process (biological process)
GO:0006914 - autophagy (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004364 - glutathione transferase activity (molecular function)
InterPro domainsIPR007239 - Autophagy-related protein 5
IPR042526 - Autophagy protein Atg5, helix rich domain
IPR042527 - Autophagy protein Atg5, UblA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140815.1 autophagy protein 5 isoform X2 [Cucumis sativus]1.3e-41100Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

XP_008456193.1 PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo]1.6e-4198.77Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMSEPDLLELWRSVSN
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

XP_022982727.1 autophagy protein 5 isoform X1 [Cucurbita maxima]4.0e-4093.9Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA
        +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMS+PDL+ELWRSV NA
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA

XP_031739164.1 autophagy protein 5 isoform X1 [Cucumis sativus]1.3e-41100Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

XP_038906792.1 autophagy protein 5 isoform X1 [Benincasa hispida]1.4e-4095.12Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA
        NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKW FINSLKEA+YI+NGNTKNVMSMSEPDL+ELWRSVSNA
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA

TrEMBL top hitse value%identityAlignment
A0A1S3C294 Autophagy protein 58.0e-4298.77Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMSEPDLLELWRSVSN
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

A0A5A7T773 Autophagy protein 58.0e-4298.77Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMSEPDLLELWRSVSN
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

A0A6J1F9G3 Autophagy protein 51.3e-3992.68Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA
        +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMS+PDL+ LWRSV NA
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA

A0A6J1IXC8 Autophagy protein 52.0e-4093.9Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA
        +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMS+PDL+ELWRSV NA
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNA

A0A6J1J5M0 Autophagy protein 57.4e-4093.83Show/hide
Query:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMS+PDL+ELWRSV N
Subjt:  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

SwissProt top hitse value%identityAlignment
A2X052 Autophagy protein 52.7e-3171.79Show/hide
Query:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSV
        IP GVL+DLLCA+PERPWNLTVHFRGYP ++L PC+GEDS+KWS++NSLKEA +II GN+KNVM+MS+ D   LW+SV
Subjt:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSV

Q5R792 Autophagy protein 58.3e-1236.71Show/hide
Query:  PTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        P G+LFDLL +    PWN+TVHF+ +P + L+ C  +D+I+  F++ +KEAD  +   ++ +  M + D  +LW  + N
Subjt:  PTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

Q6ZGL4 Autophagy protein 53.9e-3070.51Show/hide
Query:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSV
        IP GVL+DLLCA+PERPWNLTVHFRGYP ++L  C+GEDS+KWS++NSLKEA +II GN+KNVM+MS+ D   LW+SV
Subjt:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSV

Q9FFI2 Autophagy protein 54.1e-3578.75Show/hide
Query:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F+NSLKEA YIINGN KNVM+MS+ D  +LW SV N
Subjt:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

Q9H1Y0 Autophagy protein 58.3e-1236.71Show/hide
Query:  PTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        P G+LFDLL +    PWN+TVHF+ +P + L+ C  +D+I+  F++ +KEAD  +   ++ +  M + D  +LW  + N
Subjt:  PTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN

Arabidopsis top hitse value%identityAlignment
AT5G17290.1 autophagy protein Apg5 family2.9e-3678.75Show/hide
Query:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
        IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F+NSLKEA YIINGN KNVM+MS+ D  +LW SV N
Subjt:  IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATATACCAACTGGTGTACTCTTTGACCTTCTATGTGCAGAACCAGAAAGACCATGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCC
TTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATC
TGTTGGAGTTATGGCGTTCTGTATCCAATGCCTTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATATACCAACTGGTGTACTCTTTGACCTTCTATGTGCAGAACCAGAAAGACCATGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCC
TTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATC
TGTTGGAGTTATGGCGTTCTGTATCCAATGCCTTCAATTAA
Protein sequenceShow/hide protein sequence
MANIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNAFN