; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G18670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G18670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTubby-like F-box protein
Genome locationChr3:14288685..14292186
RNA-Seq ExpressionCSPI03G18670
SyntenyCSPI03G18670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]4.2e-21100Show/hide
Query:  MERSAVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGP
        MERSAVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGP
Subjt:  MERSAVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGP
KAE9595095.1 hypothetical protein Lalb_Chr18g0060771 [Lupinus albus]1.0e-1160Show/hide
Query:  MERSAVAILCLL--LLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEEN
        M++  VAI+ LL  + S + TV++DA+DC+D C TACVQ+D+R MQRC+RKC IKCGPD+KVEE+
Subjt:  MERSAVAILCLL--LLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEEN
KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1477.97Show/hide
Query:  SAVAILCLLLLS-AVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVE
        + VAILC +LLS A  TVSADAADCIDGCFTACVQKD+R MQRCE KC IKCGPD K E
Subjt:  SAVAILCLLLLS-AVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVE
XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]1.5e-1880Show/hide
Query:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTA
        ME+S   A AILCLLLLS  AVVTVSADAADCID CFTACVQKD+R MQRCE KC IKCGPDNKV+EN A
Subjt:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTA
XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]3.1e-1670.89Show/hide
Query:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKD---------SRAMQRCERKCTIKCGPDNKVEENTA
        ME+S   A AILCLLLLS  AVVTVSADAADCID CFTACVQKD         +R MQRCE KC IKCGPDNKV+EN A
Subjt:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKD---------SRAMQRCERKCTIKCGPDNKVEENTA
TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein1.9e-27100Show/hide
Query:  MERSAVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTAR
        MERSAVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTAR
Subjt:  MERSAVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTAR
A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X27.3e-1980Show/hide
Query:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTA
        ME+S   A AILCLLLLS  AVVTVSADAADCID CFTACVQKD+R MQRCE KC IKCGPDNKV+EN A
Subjt:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTA
A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X11.5e-1670.89Show/hide
Query:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKD---------SRAMQRCERKCTIKCGPDNKVEENTA
        ME+S   A AILCLLLLS  AVVTVSADAADCID CFTACVQKD         +R MQRCE KC IKCGPDNKV+EN A
Subjt:  MERS---AVAILCLLLLS--AVVTVSADAADCIDGCFTACVQKD---------SRAMQRCERKCTIKCGPDNKVEENTA
A0A4D6KJH6 Uncharacterized protein6.2e-1058.62Show/hide
Query:  AVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEE
        A  +L LL+ S + +V  DAADC+DGC T CVQ+DSR  QRCERKC+I+CGPD+ + E
Subjt:  AVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEE
A0A6A4NXS4 Uncharacterized protein5.1e-1260Show/hide
Query:  MERSAVAILCLL--LLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEEN
        M++  VAI+ LL  + S + TV++DA+DC+D C TACVQ+D+R MQRC+RKC IKCGPD+KVEE+
Subjt:  MERSAVAILCLL--LLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein1.2e-0849.09Show/hide
Query:  AILCLLLLSAVVTVSADA----ADCIDGCFTACVQKDSRAMQRCERKCTIKCGPD
        A+L ++ L + + + A+A     DC DGC TACVQ+D R   RC+RKC+I+CGPD
Subjt:  AILCLLLLSAVVTVSADA----ADCIDGCFTACVQKDSRAMQRCERKCTIKCGPD
AT1G25275.2 unknown protein4.4e-0847.27Show/hide
Query:  AILCLLLLSAVVTVSADA----ADCIDGCFTACVQKDSRAMQRCERKCTIKCGPD
        A+L ++ L + + + A+A     DC DGC TACVQ+D     RC+RKC+I+CGPD
Subjt:  AILCLLLLSAVVTVSADA----ADCIDGCFTACVQKDSRAMQRCERKCTIKCGPD
AT1G25275.3 unknown protein3.4e-0845.76Show/hide
Query:  AILCLLLLSAVVTVSADA----ADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVE
        A+L ++ L + + + A+A     DC DGC TACVQ+D R   RC+RKC+I+CGP    E
Subjt:  AILCLLLLSAVVTVSADA----ADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGATCAGCGGTGGCGATTTTGTGTTTATTGTTACTTTCTGCGGTGGTGACGGTTTCAGCGGACGCCGCCGACTGCATTGACGGCTGTTTCACTGCTTGT
GTCCAGAAAGACTCTAGGGCGATGCAGCGTTGTGAGAGGAAGTGTACAATCAAGTGCGGTCCAGATAACAAAGTTGAGGAAAATACTGCACGATGA
mRNA sequenceShow/hide mRNA sequence
AGTAAATATTTGTAAGCCAAACAAAATAGAGCATTGAATGGGTTCACAGTTTGGGAAAGTGGGTGAGTTATTTTGGAAAGATGAGATCCAAAAGCCTTTTCATTT
AATAAGTAGGAGACGTGGCGGGTGGGAATTTCCAAGCTCATTTAACAAAAAAATTGCTTTACCAATTTGCAATACACATATCTATCTCACCCCCACAAAAAAGTA
ATCAAATAAAAAGTAGATTCTGATCTAAACACAGTGTCTGGCGGCGATGGAGAGATCAGCGGTGGCGATTTTGTGTTTATTGTTACTTTCTGCGGTGGTGACGGT
TTCAGCGGACGCCGCCGACTGCATTGACGGCTGTTTCACTGCTTGTGTCCAGAAAGACTCTAGGGCGATGCAGCGTTGTGAGAGGAAGTGTACAATCAAGTGCGG
TCCAGATAACAAAGTTGAGGAAAATACTGCACGATGAGACAGAAGAACAAAGGGTAAGGGAGTGAATGTTGTGAGAAATCTTACCTTCTTGTGTTGTAATAAAGA
TAGTTGAGGGAAGATACTTTATGTATGTTATAAACAAATGTTTCCTTCTTCTTCTTCTTCTTCTTTCTTGTTTTAATAACTATGATGTGATGTTTGTGAAAGCTA
GACGTAAGCATTCTCTAAATTAGTGCTTTTCTTTGTGGCATATGTGTTTTTTTCT
Protein sequenceShow/hide protein sequence
MERSAVAILCLLLLSAVVTVSADAADCIDGCFTACVQKDSRAMQRCERKCTIKCGPDNKVEENTAR