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CSPI03G18710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G18710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCytochrome b-c1 complex subunit 6
Genome locationChr3:14330396..14334729
RNA-Seq ExpressionCSPI03G18710
SyntenyCSPI03G18710
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]9.2e-35100Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

XP_004140689.1 cytochrome b-c1 complex subunit 6 [Cucumis sativus]9.2e-35100Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

XP_008456103.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo]2.7e-3498.55Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]5.9e-3495.65Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

XP_022983580.1 cytochrome b-c1 complex subunit 6-like [Cucurbita maxima]5.9e-3495.65Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

TrEMBL top hitse value%identityAlignment
A0A0A0L6I2 UCR_hinge domain-containing protein9.9e-3598.55Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

A0A1S3C350 Cytochrome b-c1 complex subunit 61.3e-3498.55Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like2.9e-3495.65Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 62.9e-3495.65Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKL TK+K
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 63.8e-3497.1Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 66.2e-2672.46Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        M+DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCVA KL   LK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial2.3e-3388.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKL  KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 68.4e-0741.38Show/hide
Query:  LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLLTKLK
        ++E C   C K    YQAC  R+   +   K +C GQ+ ++  CIDKCV PKL  +LK
Subjt:  LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLLTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial3.3e-2781.97Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein1.7e-3488.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKL  KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein1.2e-2989.83Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC
        MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein2.3e-2881.97Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein2.3e-2881.97Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGG
AGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTATTGACGAAACTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
AAGATTTGTCATATTGCAATTTCTCAGCTTCCAAACTAAACCTAATCAGAGTTCCTAGTTTCCTCTCAGATTCGTGTTTCAGCTTCCAAAGGTTTTCTTGCGTGCTCTTT
CCCTCCAAGTCAGTACTCTTTGTTAGCCATGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAAT
ATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTA
TTGACGAAACTAAAGTAATGGGAGAGTTGTTAGGGATGTGGGGATCCTATCCTTTTGCTTTTGCAGCATTTTTCTGATTTTTTATGCAATGTCGTTTTGTGAACTTGATT
TTTGCATCAACAAAAAATGCCAAGGGCTGTGAAATTTTATAAAAACTGCCAGACCTTTAACCATGGTCAATAAGAAAGGAGATTGGATTCACGTTTGGAGATTTTGAATA
ACTTCTTCCTTCAATTTTATGGTTGCTTTATATAAACATTAGTGATAGATGAATTCTGGTTTCAGAAAACAAATGTTTAGTAAGGTGTGATCCATTTTTTAGTTTGCTGT
TCTTTGATTTATAAAAAATGGCTGTGTTGTTTGAGAATAAGTAGCCGGTTGAGGTTCAATTTGGCAGAAG
Protein sequenceShow/hide protein sequence
MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLLTKLK