; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G19170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G19170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransposase
Genome locationChr3:14943083..14947445
RNA-Seq ExpressionCSPI03G19170
SyntenyCSPI03G19170
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031742160.1 uncharacterized protein LOC116404092 [Cucumis sativus]7.2e-7061.32Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWMTQNRMSREYDLGV+ FIKFGLSH KG NSIRCPCLNC NRLLKDVST +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY W+N SFSELLSIISDLLP NNEIPC LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEYE +TKCPKCGLSRWKIAKNS KEK  V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

XP_031742398.1 uncharacterized protein LOC116404339 [Cucumis sativus]7.2e-7061.32Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWMTQNRMSREYDLGV+ FIKFGLSH KG NSIRCPCLNC NRLLKDVST +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY W+N SFSELLSIISDLLP NNEIPC LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEYE +TKCPKCGLSRWKIAKNS KEK  V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

XP_031742856.1 uncharacterized protein LOC116404483 [Cucumis sativus]1.3e-7450.58Show/hide
Query:  NLFNSFPSSSALPFVPLVTSSADGILVVAS---HLLISPIQFNPVVAVISNLSHSLEYSICIC-------DLLYRNVALRNNDLLLIGKVYFEANLDIYT
        N+FN         F+ L+  S+    +VA    H L++        + I   S + +  +C+        D++ ++    +N       VYFEANLD+YT
Subjt:  NLFNSFPSSSALPFVPLVTSSADGILVVAS---HLLISPIQFNPVVAVISNLSHSLEYSICIC-------DLLYRNVALRNNDLLLIGKVYFEANLDIYT

Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWMTQNRMSREYDLGV+ FIKFGLSH KG NSIRCPCLNC NRLLKDVST +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  ----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--NA
                                          KKFTKLSALVRLYNLKVRY W+N SFSELLSII DLLP NNEIPC LYEAKKTL ALGLSYQ  +A
Subjt:  ----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--NA

Query:  YPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
         PNDCCL RKEYE MTKCPKCGLSRWKIAKNS KEK  V AK
Subjt:  YPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

XP_031744671.1 uncharacterized protein LOC116405112 [Cucumis sativus]7.2e-7061.32Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWMTQNRMSREYDLGV+ FIKFGLSH KG NSIRCPCLNC NRLLKDVST +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY W+N SFSELLSIISDLLP NNEIPC LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEYE +TKCPKCGLSRWKIAKNS KEK  V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

XP_031744682.1 uncharacterized protein LOC116405119 [Cucumis sativus]1.1e-7061.73Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWMTQNRMSREYDLGV+ FIKFGLSH KG NSIRCPCLNCDNRLLKDVST +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY W+N SFSELLSIISDLLP NNEIPC LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEYE +TKCPKCGLSRWKIAKNS KEK  V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

TrEMBL top hitse value%identityAlignment
A0A5A7SR84 Transpos_assoc domain-containing protein3.7e-6458.02Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWM +NRMSREYD+GV+ FI+FGLSH KGSN IRCPCL C NRLLKDVS  +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY WSN SFSELLSIISDLLP NNEIP  LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEY N TKCPKCGLSRWKI KNS KE   V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

A0A5D3C1B5 Transposase3.4e-6558.44Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWM +NRMSREYD+GV+ FI+FGLSH KGSNSIRCPCL C NRLLKDVS  +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY WSN SFSELLSIISDLLP NNEIP  LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEY N TKCPKCGLSRWKI KNS KE   V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

A0A5D3CAP5 Transposase1.4e-6357.61Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWM +NRMSREYD+ V+ FI+ GLSH KGSNSIRCPCL C NRLLKDVS  +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY WSN SFSELLSIISDLLP NNEIP  LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEY N TKCPKCGLSRWKI KNS KE   V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

A0A5D3D5Q1 Transposase3.4e-6558.44Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWM +NRMSREYD+GV+ FI+FGLSH KGSNSIRCPCL C NRLLKDVS  +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY WSN SFSELLSIISDLLP NNEIP  LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEY N TKCPKCGLSRWKI KNS KE   V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

A0A5D3D9W4 Transposase1.7e-6458.02Show/hide
Query:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------
        MDKSWM +NRMS EYD+GV+ FI+FGLSH KGSNSIRCPCL C NRLLKDVS  +YHLY N  DKSY                                 
Subjt:  MDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSY---------------------------------

Query:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N
                                           KKFTKLSALVRLYNLKVRY WSN SFSELLSIISDLLP NNEIP  LYEAKKTLGALGLSYQ  +
Subjt:  -----------------------------------KKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNEIPCFLYEAKKTLGALGLSYQ--N

Query:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK
        A PNDCCL RKEY N TKCPKCGLSRWKI KNS KE   V AK
Subjt:  AYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCACTCCAGCGCTGCCATTAACGAACAACGAAACCCCCGCAATCCCTGCGCAATCTCCAAACCTTTTCAATTCGTTCCCGTCTTCTTCGGCGCTGCCATTCGTGCC
CCTCGTCACCTCCTCTGCTGATGGTATTCTTGTTGTTGCATCACATCTACTAATCAGTCCTATTCAGTTCAATCCAGTCGTGGCCGTAATCTCCAATCTGTCGCATTCTC
TTGAATATTCAATCTGCATCTGTGACCTCCTCTATCGTAATGTTGCATTAAGAAATAATGATTTGTTGTTGATTGGGAAGGTTTATTTCGAGGCCAACTTAGACATCTAT
ACAATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCAAAATGTTCATTAAATTTGGGTTGAGTCATGTCAAAGGTTCTAATTCAAT
TAGATGTCCATGTTTGAATTGCGACAATCGTTTACTTAAGGATGTCTCAACAGCTCAGTATCATTTGTATACCAATGAAAATGATAAAAGTTACAAGAAATTCACAAAGT
TGTCAGCCCTCGTGAGATTGTATAACCTGAAGGTTAGGTATGATTGGAGTAACATTAGCTTCTCTGAATTACTGTCCATAATAAGTGATCTATTACCTGGTAACAACGAA
ATTCCATGTTTTTTGTACGAAGCGAAGAAAACACTAGGTGCCTTAGGACTAAGTTATCAAAATGCATATCCTAATGATTGTTGTTTGAGCAGAAAAGAATATGAAAACAT
GACCAAGTGCCCTAAGTGTGGTTTGTCAAGGTGGAAGATCGCTAAGAACTCAAACAAGGAGAAATGTAGTGTGCCTGCCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCACTCCAGCGCTGCCATTAACGAACAACGAAACCCCCGCAATCCCTGCGCAATCTCCAAACCTTTTCAATTCGTTCCCGTCTTCTTCGGCGCTGCCATTCGTGCC
CCTCGTCACCTCCTCTGCTGATGGTATTCTTGTTGTTGCATCACATCTACTAATCAGTCCTATTCAGTTCAATCCAGTCGTGGCCGTAATCTCCAATCTGTCGCATTCTC
TTGAATATTCAATCTGCATCTGTGACCTCCTCTATCGTAATGTTGCATTAAGAAATAATGATTTGTTGTTGATTGGGAAGGTTTATTTCGAGGCCAACTTAGACATCTAT
ACAATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCAAAATGTTCATTAAATTTGGGTTGAGTCATGTCAAAGGTTCTAATTCAAT
TAGATGTCCATGTTTGAATTGCGACAATCGTTTACTTAAGGATGTCTCAACAGCTCAGTATCATTTGTATACCAATGAAAATGATAAAAGTTACAAGAAATTCACAAAGT
TGTCAGCCCTCGTGAGATTGTATAACCTGAAGGTTAGGTATGATTGGAGTAACATTAGCTTCTCTGAATTACTGTCCATAATAAGTGATCTATTACCTGGTAACAACGAA
ATTCCATGTTTTTTGTACGAAGCGAAGAAAACACTAGGTGCCTTAGGACTAAGTTATCAAAATGCATATCCTAATGATTGTTGTTTGAGCAGAAAAGAATATGAAAACAT
GACCAAGTGCCCTAAGTGTGGTTTGTCAAGGTGGAAGATCGCTAAGAACTCAAACAAGGAGAAATGTAGTGTGCCTGCCAAGTAG
Protein sequenceShow/hide protein sequence
MFTPALPLTNNETPAIPAQSPNLFNSFPSSSALPFVPLVTSSADGILVVASHLLISPIQFNPVVAVISNLSHSLEYSICICDLLYRNVALRNNDLLLIGKVYFEANLDIY
TMDKSWMTQNRMSREYDLGVKMFIKFGLSHVKGSNSIRCPCLNCDNRLLKDVSTAQYHLYTNENDKSYKKFTKLSALVRLYNLKVRYDWSNISFSELLSIISDLLPGNNE
IPCFLYEAKKTLGALGLSYQNAYPNDCCLSRKEYENMTKCPKCGLSRWKIAKNSNKEKCSVPAK