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CSPI03G19260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G19260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDExH-box ATP-dependent RNA helicase DExH7, chloroplastic
Genome locationChr3:15064656..15065410
RNA-Seq ExpressionCSPI03G19260
SyntenyCSPI03G19260
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456036.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 [Cucumis melo]4.8e-3498.65Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGD LKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
XP_011651287.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2 [Cucumis sativus]9.8e-35100Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
XP_031738102.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 [Cucumis sativus]9.8e-35100Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
XP_031738103.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X3 [Cucumis sativus]9.8e-35100Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
XP_031738104.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X4 [Cucumis sativus]9.8e-35100Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
TrEMBL top hitse value%identityAlignment
A0A1S3C1V6 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X12.3e-3498.65Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGD LKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
A0A1S4E0Z2 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X22.3e-3498.65Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGD LKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
A0A6J1C3N5 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X11.6e-3090.54Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGD LKIPKAVLHQLCQK GWDAPKFNKIH KEN FFYAV+VLRKASGRGKNRKAGGLITLQ P+EDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
A0A6J1C5N3 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X21.6e-3090.54Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGD LKIPKAVLHQLCQK GWDAPKFNKIH KEN FFYAV+VLRKASGRGKNRKAGGLITLQ P+EDEIFESAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
A0A6J1J9M9 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic7.8e-3087.84Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KGD LKIPKAVLHQLCQK GWDAPKFNKIHRKEN FFYAV++LRKASGRGKNRKAGGLITLQ P+ DEIF+SAE
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
SwissProt top hitse value%identityAlignment
F4I9Q5 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic6.8e-2367.57Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KG+  KIPKA LHQLCQ+ GW+APKFNK   +   F Y VS+LRKASGRGKNR+AGGL+TLQ P +DE FES E
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Q9C6G0 DExH-box ATP-dependent RNA helicase DExH4, chloroplastic1.2e-1958.11Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KG+  KIPKA+LHQLCQ+ GW APKFNK+  +   F Y  SV+RK+SG GK+R+AGGL+T+Q P++ E FES +
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
Arabidopsis top hitse value%identityAlignment
AT1G58050.1 RNA helicase family protein8.6e-2158.11Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KG+  KIPKA+LHQLCQ+ GW APKFNK+  +   F Y  SV+RK+SG GK+R+AGGL+T+Q P++ E FES +
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
AT1G58060.1 RNA helicase family protein4.8e-2467.57Show/hide
Query:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE
        KG+  KIPKA LHQLCQ+ GW+APKFNK   +   F Y VS+LRKASGRGKNR+AGGL+TLQ P +DE FES E
Subjt:  KGDTLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAGTTCGCAGTTTCTCCTTTTTCCAGTGGGGATGGGAATGCTCCAATCATATAGTTCCATTTTGGGGACAAAAATTGTGAAAATTTTCATTTTGGGCTCTGTTTT
GCATTCCCAGCGTGCCAAGGGGAAGAAACAGGGCGTTCGGTCAAACATGACATTAGATACATTCGACAGGGAGTGGCTAGAATGGCATGATCGGAGCATGCTTGTAAATT
TTGGTATGAATCCTCCAAAAGACATTGAGACACTCCTAAAGGCTGGAAAGGGTGATACACTAAAGATTCCCAAGGCTGTTCTTCATCAATTATGTCAAAAAGAAGGATGG
GATGCACCAAAATTTAATAAAATCCACAGAAAAGAAAATGGTTTTTTCTATGCTGTCAGTGTGCTGCGTAAAGCAAGTGGTAGAGGTAAAAATCGGAAAGCTGGAGGTCT
TATCACTCTTCAGTTTCCCAATGAGGATGAAATTTTTGAATCTGCAGAGGTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAGTTCGCAGTTTCTCCTTTTTCCAGTGGGGATGGGAATGCTCCAATCATATAGTTCCATTTTGGGGACAAAAATTGTGAAAATTTTCATTTTGGGCTCTGTTTT
GCATTCCCAGCGTGCCAAGGGGAAGAAACAGGGCGTTCGGTCAAACATGACATTAGATACATTCGACAGGGAGTGGCTAGAATGGCATGATCGGAGCATGCTTGTAAATT
TTGGTATGAATCCTCCAAAAGACATTGAGACACTCCTAAAGGCTGGAAAGGGTGATACACTAAAGATTCCCAAGGCTGTTCTTCATCAATTATGTCAAAAAGAAGGATGG
GATGCACCAAAATTTAATAAAATCCACAGAAAAGAAAATGGTTTTTTCTATGCTGTCAGTGTGCTGCGTAAAGCAAGTGGTAGAGGTAAAAATCGGAAAGCTGGAGGTCT
TATCACTCTTCAGTTTCCCAATGAGGATGAAATTTTTGAATCTGCAGAGGTACTTTGA
Protein sequenceShow/hide protein sequence
MFSSQFLLFPVGMGMLQSYSSILGTKIVKIFILGSVLHSQRAKGKKQGVRSNMTLDTFDREWLEWHDRSMLVNFGMNPPKDIETLLKAGKGDTLKIPKAVLHQLCQKEGW
DAPKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAEVL