; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G19460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G19460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description50S ribosomal protein L33-like
Genome locationChr3:15236169..15237326
RNA-Seq ExpressionCSPI03G19460
SyntenyCSPI03G19460
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058825.1 50S ribosomal protein L33-like [Cucumis melo var. makuwa]1.4e-7091.25Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KGLL QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPA
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

KAE8650541.1 hypothetical protein Csa_009952 [Cucumis sativus]4.8e-79100Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

XP_008456021.1 PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo]1.4e-7091.25Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KGLL QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPA
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

XP_031739425.1 uncharacterized protein LOC105434866 [Cucumis sativus]2.9e-7692.49Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKG-------------LLSQRALERSIRYESVICMAKRYAPETTK
        MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKG             LLSQRALERSIRYESVICMAKRYAPETTK
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKG-------------LLSQRALERSIRYESVICMAKRYAPETTK

Query:  RKRLSRKRGGDPAKKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        RKRLSRKRGGDPAKKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
Subjt:  RKRLSRKRGGDPAKKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

XP_038880588.1 uncharacterized protein LOC120072240 [Benincasa hispida]9.1e-6282.5Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        M TTIQRFCLDL +SCG RN FLSDS+SS   N +TFNS SFSA LSL++  +PN+KG LSQRA ERSIRYESVICMAKRYAP+TTKRKRLSRKRGGDPA
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADK+E++KYDPIANRHVLF EVK
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

TrEMBL top hitse value%identityAlignment
A0A0A0LAF8 Uncharacterized protein1.4e-7692.49Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKG-------------LLSQRALERSIRYESVICMAKRYAPETTK
        MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKG             LLSQRALERSIRYESVICMAKRYAPETTK
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKG-------------LLSQRALERSIRYESVICMAKRYAPETTK

Query:  RKRLSRKRGGDPAKKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        RKRLSRKRGGDPAKKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
Subjt:  RKRLSRKRGGDPAKKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

A0A1S3C284 uncharacterized protein LOC1034960736.8e-7191.25Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KGLL QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPA
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

A0A5A7UZ21 50S ribosomal protein L33-like6.8e-7191.25Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        M TTIQRFCLDLTLSCG RN FLS+SSSS PSNFITFNSPSF ATLSLTL+F+PN+KGLL QRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPA
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

A0A6J1E445 uncharacterized protein LOC111430611 isoform X13.2e-5272.96Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        M  TI+R CLD  LSCG RN FL DS+SS P +F++F   SFSA LSL++  +PN+K  LSQ A ERSIR+ SVICMA+RYAP  TKRKRLSRKRGGDP 
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEV
        KKKKTRRKGG KDFKI+RLSSTA TGFFYAKKKSRK+ADKIE+QK+DP+A RHVLFTEV
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEV

A0A6J1E4T6 uncharacterized protein LOC111430611 isoform X28.3e-5373.12Show/hide
Query:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA
        M  TI+R CLD  LSCG RN FL DS+SS P +F++F   SFSA LSL++  +PN+K  LSQ A ERSIR+ SVICMA+RYAP  TKRKRLSRKRGGDP 
Subjt:  MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPA

Query:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKI+RLSSTA TGFFYAKKKSRK+ADKIE+QK+DP+A RHVLFTEVK
Subjt:  KKKKTRRKGGGKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK

SwissProt top hitse value%identityAlignment
B6IN38 50S ribosomal protein L332.3e-0754.35Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK
        +++L S+A TGFFY KKK+ RK  +K+E +KYDP+A +HV+F E K
Subjt:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK

Q2W1A2 50S ribosomal protein L331.1e-0654.35Show/hide
Query:  IVRLSSTARTGFFY-AKKKSRKVADKIEVQKYDPIANRHVLFTEVK
        +++L STA TGFFY AKK  RK  +K+E +KYDP+  +HV F E K
Subjt:  IVRLSSTARTGFFY-AKKKSRKVADKIEVQKYDPIANRHVLFTEVK

Q3YSN4 50S ribosomal protein L338.7e-0750Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK
        +V+L+S+A+TGFFY KK++ +K+ +K+  +KYDP+  +HVLF+E K
Subjt:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK

Q5FFJ4 50S ribosomal protein L336.6e-0752.17Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK
        +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Subjt:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK

Q5HBV6 50S ribosomal protein L336.6e-0752.17Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK
        +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Subjt:  IVRLSSTARTGFFYAKKKS-RKVADKIEVQKYDPIANRHVLFTEVK

Arabidopsis top hitse value%identityAlignment
AT3G06320.1 Ribosomal protein L33 family protein1.5e-0960Show/hide
Query:  KDFKIVRLSSTARTGFFYAKKKSRK-VADKIEVQKYDPIANRHVLFTEVK
        K F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  KDFKIVRLSSTARTGFFYAKKKSRK-VADKIEVQKYDPIANRHVLFTEVK

AT5G18790.1 Ribosomal protein L33 family protein1.5e-0960Show/hide
Query:  KDFKIVRLSSTARTGFFYAKKKSRK-VADKIEVQKYDPIANRHVLFTEVK
        K F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  KDFKIVRLSSTARTGFFYAKKKSRK-VADKIEVQKYDPIANRHVLFTEVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAATAAGGAATCATTTTCTCAGTGATTCTTCGTCTTCACCTCCTTCAAACTTCATCACCTT
CAACTCTCCCTCCTTCTCTGCTACCCTCTCGCTCACGCTCACCTTCCTTCCCAATCTCAAAGGATTGTTGTCACAGAGGGCTCTGGAAAGATCAATTCGCTATGAATCCG
TAATTTGCATGGCCAAAAGATATGCTCCTGAGACTACAAAGAGAAAGAGGTTGAGTAGGAAGCGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGGA
GGGAAAGATTTCAAAATAGTCCGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGTAGGAAGGTGGCTGATAAGATTGAGGTCCAGAAATATGA
CCCTATTGCAAATCGCCATGTTCTGTTTACTGAAGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAATAAGGAATCATTTTCTCAGTGATTCTTCGTCTTCACCTCCTTCAAACTTCATCACCTT
CAACTCTCCCTCCTTCTCTGCTACCCTCTCGCTCACGCTCACCTTCCTTCCCAATCTCAAAGGATTGTTGTCACAGAGGGCTCTGGAAAGATCAATTCGCTATGAATCCG
TAATTTGCATGGCCAAAAGATATGCTCCTGAGACTACAAAGAGAAAGAGGTTGAGTAGGAAGCGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGGA
GGGAAAGATTTCAAAATAGTCCGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGTAGGAAGGTGGCTGATAAGATTGAGGTCCAGAAATATGA
CCCTATTGCAAATCGCCATGTTCTGTTTACTGAAGTCAAGTGA
Protein sequenceShow/hide protein sequence
MVTTIQRFCLDLTLSCGIRNHFLSDSSSSPPSNFITFNSPSFSATLSLTLTFLPNLKGLLSQRALERSIRYESVICMAKRYAPETTKRKRLSRKRGGDPAKKKKTRRKGG
GKDFKIVRLSSTARTGFFYAKKKSRKVADKIEVQKYDPIANRHVLFTEVK