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CSPI03G19710 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G19710
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationChr3:15432631..15434276
RNA-Seq ExpressionCSPI03G19710
SyntenyCSPI03G19710
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014698.1 hypothetical protein SDJN02_22327 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-4088.89Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        M PT S+ASHG+PKWEFSCD EVDYESEKKASIVYKALVVDKELQPDKVKR M+ SDGKLSIH EAVEARFLRASFSAFVDVLTLATKTIEDFGQ  DF
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
XP_004146228.1 uncharacterized protein LOC101217139 [Cucumis sativus]5.1e-47100Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
XP_008466840.1 PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]2.7e-4089.9Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        MTPTASVAS GE KWEFSCDFEVDYESEKKASIVY AL+VDKELQPDKVKRAMS S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIEDFG E +F
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]1.6e-4090.91Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        M PT SVAS GEP WEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKR M+ SDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQ  DF
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]2.5e-4190.91Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        M PTASVAS GE KWEFSCDFEVDYESEKKASIVY AL+VDKELQPDKVKR MS SDGKLSIHFEAVEARFLRASFSAFVDVLTLATKT+EDFGQE DF
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
TrEMBL top hitse value%identityAlignment
A0A0A0L7A2 Uncharacterized protein2.5e-47100Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
A0A1S3CTG0 uncharacterized protein LOC1035041461.3e-4089.9Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        MTPTASVAS GE KWEFSCDFEVDYESEKKASIVY AL+VDKELQPDKVKRAMS S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIEDFG E +F
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
A0A5D3CJ23 EKC/KEOPS complex, subunit Pcc11.3e-4089.9Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        MTPTASVAS GE KWEFSCDFEVDYESEKKASIVY AL+VDKELQPDKVKRAMS S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIEDFG E +F
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
A0A6J1CHJ5 uncharacterized protein LOC1110115641.2e-3887.76Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEED
        M PTASVAS GE KWEF CDFEVDYESEKKASIVY AL VDKELQPDKVKR M+ SDGKLS+HFEAVEARFLRASFSAFVDVLTLATKTIEDFGQ  D
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEED
A0A6J1G2C3 uncharacterized protein LOC1114500284.0e-3783.84Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
        M PTASV S G+ KWEFSCDFEVD ESEKKASIVY ALVVDKELQPDKVKR M+ SDGKLS+HFEAVEARFLRAS+SAF+DVLTLA KTIEDFGQ  DF
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein5.1e-2961.46Show/hide
Query:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQE
        M  T    +  +  W+FSC+ +V +ESE+ A I Y +L VDKELQPDKV+R MS S+ KLS+HFEA+EAR LRASFSAFVDVLTLAT+TI++FGQ+
Subjt:  MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCCACAGCTTCCGTCGCTTCTCATGGAGAGCCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGATTACGAGTCTGAGAAGAAAGCTTCAATTGTCTATAAAGC
TTTAGTAGTTGATAAAGAGTTACAGCCAGACAAGGTGAAAAGGGCGATGTCAAATTCTGATGGAAAACTTTCAATACATTTTGAGGCAGTGGAAGCAAGGTTTTTGCGTG
CATCATTCAGTGCGTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTTGGACAAGAAGAGGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAAATAAATAAATAAACCCTAAAATAATTCTCTCACATCCGAGTCAGTCGTCTTCGTCTTCAACGAGTCACGGTCTCAACTTCTTCCCATTTCTTCCACTGCCACGC
CTCAGCCTCGCCGCCGACCATCCTCGCCACGCCTCCTACTACCCGCTGCCGTTACCGGTTTATTTGTGGGGGGAAATCTGGCTGTTTTTCATTAGAATTGAAGCAATGAC
TCCCACAGCTTCCGTCGCTTCTCATGGAGAGCCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGATTACGAGTCTGAGAAGAAAGCTTCAATTGTCTATAAAGCTTTAG
TAGTTGATAAAGAGTTACAGCCAGACAAGGTGAAAAGGGCGATGTCAAATTCTGATGGAAAACTTTCAATACATTTTGAGGCAGTGGAAGCAAGGTTTTTGCGTGCATCA
TTCAGTGCGTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTTGGACAAGAAGAGGATTTCTGATAGCCTTACTGACCTATTTACATGGCTCTCAAATA
TCAAGTGTCATTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MTPTASVASHGEPKWEFSCDFEVDYESEKKASIVYKALVVDKELQPDKVKRAMSNSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQEEDF