; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G19760 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G19760
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:15457028..15458282
RNA-Seq ExpressionCSPI03G19760
SyntenyCSPI03G19760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57663.1 hypothetical protein Csa_011496 [Cucumis sativus]3.9e-10295.02Show/hide
Query:  MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSNLRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALY
        MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSN RKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALY
Subjt:  MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSNLRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALY

Query:  EQEDAPTSQRKWVLVDIFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQFGFLHVLQTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTI
        EQEDAPTSQRKWVLV IFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGER        QTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTI
Subjt:  EQEDAPTSQRKWVLVDIFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQFGFLHVLQTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTI

Query:  L
        L
Subjt:  L
TrEMBL top hitse value%identityAlignment
A0A0A0L7A5 Uncharacterized protein1.9e-10295.02Show/hide
Query:  MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSNLRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALY
        MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSN RKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALY
Subjt:  MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSNLRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALY

Query:  EQEDAPTSQRKWVLVDIFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQFGFLHVLQTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTI
        EQEDAPTSQRKWVLV IFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGER        QTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTI
Subjt:  EQEDAPTSQRKWVLVDIFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQFGFLHVLQTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTI

Query:  L
        L
Subjt:  L
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGTACAGCGCAGTTCAAGTGGGTCACATGAACGACTCAATAATTTATTCTTTAGTTGCTTTGAAATCAATCAAAGAGTGGGTTGCTATCGGACCCATTTCAAATC
CCGCATTGCCTTGTTTCGGAATTCGAGGCCCGATCTTCGAACTTTTTGGATTATAAAATGCTCGTGGTCGAACTTAAGGAAGAAGAAACTCAAGCAGTCAATTTCTTCTG
GACCCACCAAGGGATTCTTGACTGAGTTGCTTCATTATTTTGTCTATGAACTGAAAATGATACAATTTATTGCTCTATATGAACAAGAAGATGCTCCAACCTCTCAAAGG
AAATGGGTTTTGGTGGATATCTTTGATTTGGGTTTTGTTATTGTTTATTGCTGCCATTGTGCATTGCTAGCAACCCTTTTGTTTTCTGCTTCAAAAGAGAAAATTGGAGG
AGATGGGGTTGGGGGAGATGGAAAAGGGGAAAGGCAATTTGGCTTCTTACATGTTCTTCAGACTCAAGCACATGTAAAAGCAGCTATGGTTTTGGAATTTCATGGTCTTG
TTGATAAGCTTATAGCCTTCATCCATCTTGCATATTACAATTCTACGATTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGTACAGCGCAGTTCAAGTGGGTCACATGAACGACTCAATAATTTATTCTTTAGTTGCTTTGAAATCAATCAAAGAGTGGGTTGCTATCGGACCCATTTCAAATC
CCGCATTGCCTTGTTTCGGAATTCGAGGCCCGATCTTCGAACTTTTTGGATTATAAAATGCTCGTGGTCGAACTTAAGGAAGAAGAAACTCAAGCAGTCAATTTCTTCTG
GACCCACCAAGGGATTCTTGACTGAGTTGCTTCATTATTTTGTCTATGAACTGAAAATGATACAATTTATTGCTCTATATGAACAAGAAGATGCTCCAACCTCTCAAAGG
AAATGGGTTTTGGTGGATATCTTTGATTTGGGTTTTGTTATTGTTTATTGCTGCCATTGTGCATTGCTAGCAACCCTTTTGTTTTCTGCTTCAAAAGAGAAAATTGGAGG
AGATGGGGTTGGGGGAGATGGAAAAGGGGAAAGGCAATTTGGCTTCTTACATGTTCTTCAGACTCAAGCACATGTAAAAGCAGCTATGGTTTTGGAATTTCATGGTCTTG
TTGATAAGCTTATAGCCTTCATCCATCTTGCATATTACAATTCTACGATTTTGTGATCTGATACTTAATGATT
Protein sequenceShow/hide protein sequence
MSVQRSSSGSHERLNNLFFSCFEINQRVGCYRTHFKSRIALFRNSRPDLRTFWIIKCSWSNLRKKKLKQSISSGPTKGFLTELLHYFVYELKMIQFIALYEQEDAPTSQR
KWVLVDIFDLGFVIVYCCHCALLATLLFSASKEKIGGDGVGGDGKGERQFGFLHVLQTQAHVKAAMVLEFHGLVDKLIAFIHLAYYNSTIL