| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035681.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.2e-84 | 40.04 | Show/hide |
Query: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMS-ENNKKAEEEAELIEADDGDRVS-----------YSDNSENI
I+ K K+ L NY + + C PGHLSN C QRK IALAE+E MS + ++ EEE ELIEADDGDR+S N ++
Subjt: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMS-ENNKKAEEEAELIEADDGDRVS-----------YSDNSENI
Query: VAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLAR
K +N K H +PYK+GW KKGGE ++NEICTI LSIG+ YKDQI+CD+ E+DV PLA+
Subjt: VAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLAR
Query: KNSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-
KN+E R +++QLFITV GK LL EREQDLLGL++ +KS+ E+VEP+L+ELF EFPHLKKEP+GLPPL+D+QH I+LVP ASL NL HYRMSP++
Subjt: KNSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-
Query: -------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTN
D LDQLGKA+IFSKIDL++GYHQI+IR DEWKT FKTN
Subjt: -------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTN
Query: EGLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--------------SFDDIK---------KKLVSNPIIQLS--
EGLFE ++ LF + ++ L+ E + E S +++ ++ + N + ++
Subjt: EGLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--------------SFDDIK---------KKLVSNPIIQLS--
Query: --NFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
F+SPFE+AV+A GTGIG VLS QGHPIEYFSEKLS+SRQ
Subjt: --NFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
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| KAA0047078.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.3e-81 | 51.32 | Show/hide |
Query: PGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------SDNSENIVAKKLVTM
PGH SNTCPQRK IALA++E S SE++++ EEEA+LIEADDG RVS + +SEN VAKKLVT
Subjt: PGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------SDNSENIVAKKLVTM
Query: LNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYE
LNLKA H NPYK+GW KKGGE ++EICT+ LSIG+ YKDQI+CD+ E+D EREQDLLGLIIV+KS EEQ E
Subjt: LNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYE
Query: VVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-----DHLDQLGK----------------AIIFSKIDLKSGYHQIRI
++ +LQ+LF+EFPHLKKEP+GLPPL+D+Q I+L+PGASL L+HYRMSP + +H+++L + + + IDLKSGYHQ+RI
Subjt: VVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-----DHLDQLGK----------------AIIFSKIDLKSGYHQIRI
Query: RTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
R DEWKTTFKTNEGLFEWM+M FGLSN PSTF+RLMN+ L
Subjt: RTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
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| KAA0062943.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 1.0e-89 | 39.64 | Show/hide |
Query: NYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------
NY + + C P HLSN CPQRK IALAE+E MSE +K+ +EE ELIEAD+GDR+S
Subjt: NYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------
Query: SDNSENIVAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDL
S +SEN VA+KLV LNLK H +PYK+GW KK GE ++NEICTI LSI + YKDQI+CD+ E+D VC L EQDL
Subjt: SDNSENIVAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDL
Query: LGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--------------------------------
LGL++ EKS+ E+VEP+L+ELF EFPHLKKEP+GLPPL D+QH I+LVPGASL +L HYRMSP++
Subjt: LGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--------------------------------
Query: ------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPST------------
D LDQLGKA +FSKIDL+S YHQIRIR DEWKTTFK NEGLFEW+ M FGLSNAPST
Subjt: ------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPST------------
Query: -------------------------------------------------------------------------FVRLMNETLT----------------Q
F+R + +T Q
Subjt: -------------------------------------------------------------------------FVRLMNETLT----------------Q
Query: QESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
Q+SF++IK++L S+PI+QL +F+SPFE+ VDA G GIG VLS QGHPIEYFSEKLS+SRQ
Subjt: QESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
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| TYK30863.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] | 8.8e-86 | 40.11 | Show/hide |
Query: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVS-----------YSDNSENIV
I+ K K+ L NY + + C PGHLSN C QRK IALAE+E MS +++ EEE ELIEADDGDR+S N ++
Subjt: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVS-----------YSDNSENIV
Query: AKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLARK
K +N K H +PYK+GW KKGGE ++NEICTI LSIG+ YKDQI+CD+ E+DV PLA+K
Subjt: AKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLARK
Query: NSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--
N+E R +++QLFITV GK LL EREQDLLGL++ +KS+ E+VEP+L+ELF EFPHLKKEP+GLPPL+D+QH I+LVP ASL NL HYRMSP++
Subjt: NSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--
Query: ------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNE
D LDQLGKA+IFSKIDL++GYHQI+IR DEWKT FKTNE
Subjt: ------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNE
Query: GLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--SFDDIKKKLVSNPIIQL-------------------------
GLFE ++ LF + ++ L+ E + E + I+ + I ++
Subjt: GLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--SFDDIKKKLVSNPIIQL-------------------------
Query: SNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
F+SPFE+AV+A GTGIG VLS QGHPIEYFSEKLS+SRQ
Subjt: SNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
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| XP_031744062.1 uncharacterized protein LOC116404773 [Cucumis sativus] | 1.9e-109 | 42.57 | Show/hide |
Query: SVWWDQLEIYWQRCGKQPIRSWKKMKKLLKARFLPPNYEQTLYNQYQNC---------------------------------------------------
S WWDQLEI QRCGKQPIRSW+KMKKLLKARFLPPNYEQTLYNQYQNC
Subjt: SVWWDQLEIYWQRCGKQPIRSWKKMKKLLKARFLPPNYEQTLYNQYQNC---------------------------------------------------
Query: ----------------------------------------------------------------HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEA
GHLSN CPQRK IA+A EEGG SE++ +AEEE
Subjt: ----------------------------------------------------------------HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEA
Query: ELIEADDGDRVSY-------------------------------------SDNSENIVAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSI
ELIEADDG+RVS S +SEN VAKKLV +LNLKA H PYK+GW +KGGE V+EICT+ LSI
Subjt: ELIEADDGDRVSY-------------------------------------SDNSENIVAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSI
Query: GSEYKDQIICDITEIDV------------------------------------PLARKNSEGTRHEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQY
G+ YKDQI+CD+ E+DV P+ +K +EG R EKQLFITV GKK+L EREQ +LGL+++EK+KE+Q
Subjt: GSEYKDQIICDITEIDV------------------------------------PLARKNSEGTRHEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQY
Query: EVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD----------------------------------------------
E +EPKLQ+L EFPH+K+EP+GLPPL+D+QHHI+L+PGASL NLAHYRMSPQ+
Subjt: EVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD----------------------------------------------
Query: ----------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETLTQQESFDDI
D LDQLGKA IFSKIDLKSGYHQIR+R DEWKT FKTNEGLFEWMVM FGLSNAPSTF+RLMN+TL DI
Subjt: ----------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETLTQQESFDDI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T256 Reverse transcriptase | 1.1e-84 | 40.04 | Show/hide |
Query: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMS-ENNKKAEEEAELIEADDGDRVS-----------YSDNSENI
I+ K K+ L NY + + C PGHLSN C QRK IALAE+E MS + ++ EEE ELIEADDGDR+S N ++
Subjt: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMS-ENNKKAEEEAELIEADDGDRVS-----------YSDNSENI
Query: VAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLAR
K +N K H +PYK+GW KKGGE ++NEICTI LSIG+ YKDQI+CD+ E+DV PLA+
Subjt: VAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLAR
Query: KNSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-
KN+E R +++QLFITV GK LL EREQDLLGL++ +KS+ E+VEP+L+ELF EFPHLKKEP+GLPPL+D+QH I+LVP ASL NL HYRMSP++
Subjt: KNSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-
Query: -------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTN
D LDQLGKA+IFSKIDL++GYHQI+IR DEWKT FKTN
Subjt: -------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTN
Query: EGLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--------------SFDDIK---------KKLVSNPIIQLS--
EGLFE ++ LF + ++ L+ E + E S +++ ++ + N + ++
Subjt: EGLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--------------SFDDIK---------KKLVSNPIIQLS--
Query: --NFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
F+SPFE+AV+A GTGIG VLS QGHPIEYFSEKLS+SRQ
Subjt: --NFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
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| A0A5A7U9F4 Uncharacterized protein | 1.4e-76 | 56.4 | Show/hide |
Query: PLARKNSEGTRHEKQ---LFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRM
P+ +KNSEG R K LFITV GKKLL EREQDLLGL+I +KSKEEQ E++EPKL +LF+EFPHLKKEP+GLPPL+D+QH I+L+PGASL NLAHYRM
Subjt: PLARKNSEGTRHEKQ---LFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRM
Query: SPQD----DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPST----------------------------------
S ++ D L+QLGK FSK DLKSGY QIRI+ DEWKTTFKTNEGLFEW+VM FGLSNAPST
Subjt: SPQD----DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPST----------------------------------
Query: -----------FVRLMNETLT----------------QQESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYF
F+R N + QQESF+DIK++L SNPI+QL +FSSPFE+AVDA TGIGVVLS QGHPIEYF
Subjt: -----------FVRLMNETLT----------------QQESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYF
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| A0A5A7V4G7 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.9e-90 | 39.64 | Show/hide |
Query: NYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------
NY + + C P HLSN CPQRK IALAE+E MSE +K+ +EE ELIEAD+GDR+S
Subjt: NYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------
Query: SDNSENIVAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDL
S +SEN VA+KLV LNLK H +PYK+GW KK GE ++NEICTI LSI + YKDQI+CD+ E+D VC L EQDL
Subjt: SDNSENIVAKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDL
Query: LGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--------------------------------
LGL++ EKS+ E+VEP+L+ELF EFPHLKKEP+GLPPL D+QH I+LVPGASL +L HYRMSP++
Subjt: LGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--------------------------------
Query: ------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPST------------
D LDQLGKA +FSKIDL+S YHQIRIR DEWKTTFK NEGLFEW+ M FGLSNAPST
Subjt: ------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPST------------
Query: -------------------------------------------------------------------------FVRLMNETLT----------------Q
F+R + +T Q
Subjt: -------------------------------------------------------------------------FVRLMNETLT----------------Q
Query: QESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
Q+SF++IK++L S+PI+QL +F+SPFE+ VDA G GIG VLS QGHPIEYFSEKLS+SRQ
Subjt: QESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
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| A0A5D3C3X9 Reverse transcriptase | 6.4e-82 | 51.32 | Show/hide |
Query: PGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------SDNSENIVAKKLVTM
PGH SNTCPQRK IALA++E S SE++++ EEEA+LIEADDG RVS + +SEN VAKKLVT
Subjt: PGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVSY-------------------------------------SDNSENIVAKKLVTM
Query: LNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYE
LNLKA H NPYK+GW KKGGE ++EICT+ LSIG+ YKDQI+CD+ E+D EREQDLLGLIIV+KS EEQ E
Subjt: LNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDVPLARKNSEGTRHEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYE
Query: VVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-----DHLDQLGK----------------AIIFSKIDLKSGYHQIRI
++ +LQ+LF+EFPHLKKEP+GLPPL+D+Q I+L+PGASL L+HYRMSP + +H+++L + + + IDLKSGYHQ+RI
Subjt: VVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD-----DHLDQLGK----------------AIIFSKIDLKSGYHQIRI
Query: RTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
R DEWKTTFKTNEGLFEWM+M FGLSN PSTF+RLMN+ L
Subjt: RTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
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| A0A5D3E417 Transposon Ty3-I Gag-Pol polyprotein isoform X1 | 4.3e-86 | 40.11 | Show/hide |
Query: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVS-----------YSDNSENIV
I+ K K+ L NY + + C PGHLSN C QRK IALAE+E MS +++ EEE ELIEADDGDR+S N ++
Subjt: IRSWKKMKKLLKARFLPPNYEQTLYNQYQNC-HPGHLSNTCPQRKIIALAEEEGGSMSENNKKAEEEAELIEADDGDRVS-----------YSDNSENIV
Query: AKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLARK
K +N K H +PYK+GW KKGGE ++NEICTI LSIG+ YKDQI+CD+ E+DV PLA+K
Subjt: AKKLVTMLNLKARTHLNPYKMGWGKKGGEVVVNEICTITLSIGSEYKDQIICDITEIDV------------------------------------PLARK
Query: NSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--
N+E R +++QLFITV GK LL EREQDLLGL++ +KS+ E+VEP+L+ELF EFPHLKKEP+GLPPL+D+QH I+LVP ASL NL HYRMSP++
Subjt: NSEGTR--HEKQLFITVCGKKLLNEREQDLLGLIIVEKSKEEQYEVVEPKLQELFDEFPHLKKEPEGLPPLQDVQHHINLVPGASLSNLAHYRMSPQD--
Query: ------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNE
D LDQLGKA+IFSKIDL++GYHQI+IR DEWKT FKTNE
Subjt: ------------------------------------------------------------DHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNE
Query: GLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--SFDDIKKKLVSNPIIQL-------------------------
GLFE ++ LF + ++ L+ E + E + I+ + I ++
Subjt: GLFE---------WMVMLFGLSNAPSTFVR----------------LMNETLTQQE--SFDDIKKKLVSNPIIQL-------------------------
Query: SNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
F+SPFE+AV+A GTGIG VLS QGHPIEYFSEKLS+SRQ
Subjt: SNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLSSSRQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.4e-09 | 44.59 | Show/hide |
Query: YRMSPQDDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
Y + D+ L +LGK F+ IDL G+HQI + KT F T G +E++ M FGL NAP+TF R MN L
Subjt: YRMSPQDDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.7e-05 | 33.85 | Show/hide |
Query: RLMNETLTQQESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLS
++ + L E+F+ +K ++ +PI+QL +F F + DA +G VLS GHPI + S L+
Subjt: RLMNETLTQQESFDDIKKKLVSNPIIQLSNFSSPFEMAVDAYGTGIGVVLSHQGHPIEYFSEKLS
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| P27502 Polyprotein P3 | 1.4e-09 | 43.04 | Show/hide |
Query: LDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETLTQQESFDDIKKKLV
++ + KA IFSK DLK+G+H ++++ + TTF +EGL+ W V FG++NAP F R M QESF D+K L+
Subjt: LDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETLTQQESFDDIKKKLV
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| P31843 RNA-directed DNA polymerase homolog | 1.5e-11 | 51.35 | Show/hide |
Query: YRMSPQDDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
Y + DD D+L +A F+K+DL+SGY Q+RI DE KTT T G FE+ VM FGL+NA +TF LMN L
Subjt: YRMSPQDDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNETL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 5.1e-12 | 52.24 | Show/hide |
Query: DDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNET
D+ L ++G A IF+ +DL SGYHQI + +D +KT F T G +E+ VM FGL NAPSTF R M +T
Subjt: DDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNET
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 5.1e-12 | 52.24 | Show/hide |
Query: DDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNET
D+ L ++G A IF+ +DL SGYHQI + +D +KT F T G +E+ VM FGL NAPSTF R M +T
Subjt: DDHLDQLGKAIIFSKIDLKSGYHQIRIRTRDEWKTTFKTNEGLFEWMVMLFGLSNAPSTFVRLMNET
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