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CSPI03G20120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G20120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:15917976..15918416
RNA-Seq ExpressionCSPI03G20120
SyntenyCSPI03G20120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061455.1 hypothetical protein E6C27_scaffold41G00110 [Cucumis melo var. makuwa]3.2e-1353.76Show/hide
Query:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAG--------EKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPK
        MQQ+P+INRNPFEGKK            +AG LL          EK  N  QNSNS GEEQ   +GK+A++LWR++K+SGNK  EVNAVCSPK
Subjt:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAG--------EKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPK

TrEMBL top hitse value%identityAlignment
A0A0A0L3L4 Uncharacterized protein2.1e-4273.13Show/hide
Query:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAGEKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPKIPSVNSSLNELTAAK
        M+QIP+INRNPFEGKK          F  +   L  +K  NK QNSNSVG +QQPRMGK+AKDLWRK+KNSGNKE EVNA CSPKIPSVNSSLNEL A  
Subjt:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAGEKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPKIPSVNSSLNELTAAK

Query:  SVGEEQQPRVGKEAKDLWRKEKNGGNKESDVNAV
        SVGEEQQPRVGKEAKDLWRKEKN GNK+S VNAV
Subjt:  SVGEEQQPRVGKEAKDLWRKEKNGGNKESDVNAV

A0A0A0LCB6 Uncharacterized protein2.6e-7798.64Show/hide
Query:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAGEKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPKIPSVNSSLNELTAAK
        M+QIP+INRNPFEGKKRKEKNDWCCTFRLAGVLLAGEKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPKIPSVNSSLNELTAAK
Subjt:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAGEKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPKIPSVNSSLNELTAAK

Query:  SVGEEQQPRVGKEAKDLWRKEKNGGNKESDVNAVFFFQNSICQQLPK
        SVGEEQQPRVGKEAKDLWRKEKNGGNKESDVNAVFFFQNSICQQLPK
Subjt:  SVGEEQQPRVGKEAKDLWRKEKNGGNKESDVNAVFFFQNSICQQLPK

A0A5A7V6J4 Uncharacterized protein1.5e-1353.76Show/hide
Query:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAG--------EKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPK
        MQQ+P+INRNPFEGKK            +AG LL          EK  N  QNSNS GEEQ   +GK+A++LWR++K+SGNK  EVNAVCSPK
Subjt:  MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAG--------EKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGATTCCGTCAATCAATAGAAACCCTTTCGAAGGAAAAAAAAGAAAAGAAAAGAATGACTGGTGCTGTACTTTTCGACTGGCCGGCGTACTCCTCGCCGGAGA
AAAAAGAGCAAACAAGCTCCAAAATTCAAATTCTGTAGGAGAAGAGCAACAGCCGCGCATGGGGAAAGACGCAAAAGATTTATGGAGGAAAAAGAAAAACAGTGGCAATA
AAGAATTTGAAGTTAATGCTGTTTGTTCTCCCAAAATTCCATCTGTCAACAGCTCCCTAAATGAATTAACTGCCGCCAAATCTGTAGGAGAAGAACAACAGCCGCGCGTG
GGGAAAGAGGCAAAGGATTTATGGAGGAAAGAGAAAAACGGTGGCAATAAAGAATCTGATGTTAATGCTGTTTTTTTTTTCCAAAATTCCATTTGCCAACAGCTCCCTAA
A
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGATTCCGTCAATCAATAGAAACCCTTTCGAAGGAAAAAAAAGAAAAGAAAAGAATGACTGGTGCTGTACTTTTCGACTGGCCGGCGTACTCCTCGCCGGAGA
AAAAAGAGCAAACAAGCTCCAAAATTCAAATTCTGTAGGAGAAGAGCAACAGCCGCGCATGGGGAAAGACGCAAAAGATTTATGGAGGAAAAAGAAAAACAGTGGCAATA
AAGAATTTGAAGTTAATGCTGTTTGTTCTCCCAAAATTCCATCTGTCAACAGCTCCCTAAATGAATTAACTGCCGCCAAATCTGTAGGAGAAGAACAACAGCCGCGCGTG
GGGAAAGAGGCAAAGGATTTATGGAGGAAAGAGAAAAACGGTGGCAATAAAGAATCTGATGTTAATGCTGTTTTTTTTTTCCAAAATTCCATTTGCCAACAGCTCCCTAA
A
Protein sequenceShow/hide protein sequence
MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAGEKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPKIPSVNSSLNELTAAKSVGEEQQPRV
GKEAKDLWRKEKNGGNKESDVNAVFFFQNSICQQLPK