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CSPI03G20170 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G20170
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein root UVB sensitive 1, chloroplastic isoform X1
Genome locationChr3:15962645..15968195
RNA-Seq ExpressionCSPI03G20170
SyntenyCSPI03G20170
Gene Ontology termsGO:0007155 - cell adhesion (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005540 - hyaluronic acid binding (molecular function)
InterPro domainsIPR006968 - Root UVB sensitive family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449956.1 PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis melo]9.5e-4598.86Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGW TDGLIARPLTTRICECHVT
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
XP_011651345.1 protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis sativus]1.9e-45100Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
XP_016900848.1 PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis melo]9.5e-4598.86Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGW TDGLIARPLTTRICECHVT
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
XP_031738101.1 protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis sativus]1.9e-45100Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
XP_038881395.1 protein root UVB sensitive 1, chloroplastic [Benincasa hispida]8.9e-4395.4Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHV
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDC+PGGRLQMSLEYVEREF HVKYDGELAGW TDGLIARPLT RICECHV
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHV
TrEMBL top hitse value%identityAlignment
A0A0A0L9N6 Uncharacterized protein9.3e-46100Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
A0A1S3BP56 protein root UVB sensitive 1, chloroplastic isoform X14.6e-4598.86Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGW TDGLIARPLTTRICECHVT
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
A0A1S4DXZ7 protein root UVB sensitive 1, chloroplastic isoform X24.6e-4598.86Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
        MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGW TDGLIARPLTTRICECHVT
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT
A0A6J1D4K5 protein root UVB sensitive 1, chloroplastic isoform X11.4e-3887.36Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHV
        MLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVKYDGELAGW TDGLIARPL  RI  CH+
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHV
A0A6J1F1U0 protein root UVB sensitive 1, chloroplastic isoform X11.1e-3586.75Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRIC
        MLKESA P DMLKA+FHVNYLHWLERNAGI ARSA+NDC+PGGRLQ+SLEYVEREF HVKYDGELAGW TDGLIARPL  RIC
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRIC
SwissProt top hitse value%identityAlignment
Q7X6P3 Protein root UVB sensitive 1, chloroplastic1.9e-2764.63Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRI
        MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K D E  GW T+GLIARPL TRI
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRI
Arabidopsis top hitse value%identityAlignment
AT3G45890.1 Protein of unknown function, DUF6471.3e-2864.63Show/hide
Query:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRI
        MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K D E  GW T+GLIARPL TRI
Subjt:  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAA
TGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAA
TTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGTTGAGCTTACTATCTGCCGAAGCGAAGGAATCAGCAGCAAATATTGAAAAGCGACTGCAATTGGGTTCAAAGCTCAGTGATGTGGCCACTTGTGAGGAGGATGTTC
TTGAACTCTTAAGTCTGTTCAATAAAGAAAATTATATTCTATCAGAGCACAGGGGAAAATATTGTGTAATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCA
GTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTA
TGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAA
CTTAGGACGAGTTACTATACTACAAATTAAAGTACAAAGCTAGCCAGGACATTTCTAACAACACTGGATTTTTTAGAGATGGGACAAGTGTGCTTTGAAGGGGATTGACC
GTGCTAAAATTCTTCGAGGATCGTACATTCTTGAATAACTAAGTGTTGCTTTTACAAGTCAGTCAATGTCTGCAGCTGTTGATCGTAAAGATTCTCTATGGCATCTAGAG
ATGTCCACGGGACGGGGTTGGGGATGTCACTTCCCGTCCCCACCATCGCCCCCTATTCCATTCCCCATCCCCACCAAATTTCCCACGGGGAACGGGGCAGTGATTCCCTG
TGGGGATCGGGTTTCCCGCAGGAAAAAATTCT
Protein sequenceShow/hide protein sequence
MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT