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CSPI03G20400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G20400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:16266952..16272216
RNA-Seq ExpressionCSPI03G20400
SyntenyCSPI03G20400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57721.1 hypothetical protein Csa_009912 [Cucumis sativus]7.1e-3397.33Show/hide
Query:  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFVCLVASLVQLA
        MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWF+CLVASLV LA
Subjt:  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFVCLVASLVQLA
TrEMBL top hitse value%identityAlignment
A0A0A0LCD7 Uncharacterized protein3.5e-3397.33Show/hide
Query:  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFVCLVASLVQLA
        MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWF+CLVASLV LA
Subjt:  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFVCLVASLVQLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTTAAGGTTCAAGGGGACTCAGCTCTGAATCGGACCACACTCTTGGGAATTTGCTTTAATGGAGTTCTGAAGATTGAAGTCTTTCAACAGTATGAAGCTACTGC
CTTGTTGTGTTGCCTTGACCTCGCATCCATGAGCTGCAAGACAAGTTTGGGGTCAAGGAGCGAGCATGCTAGCTGTTGGTTCGTCTGTTTAGTTGCATCGTTGGTTCAAC
TTGCATAA
mRNA sequenceShow/hide mRNA sequence
CTCGTTTTTGGACTACTATGGCATGATAGTTACAAGGAAGCTTATATGCGTATACAATTTCCTGAAATTTCCTCGGTGACTTTTTTTTCCGGACATTTTCATTCAAGGCT
GTGTTAGATGATCTCGTCCAAAGTGGTAACTTATGGGCTTCACGTTCTGCTCAAATCCTAGCATTGTGGTTTCCAGTTATTGTGTTACAGTAAGTCAATACCAAGAAAGT
CAAGAACTGCAGTTTTCTCATACATCCATCATCCATGGCGCTTAAGGTTCAAGGGGACTCAGCTCTGAATCGGACCACACTCTTGGGAATTTGCTTTAATGGAGTTCTGA
AGATTGAAGTCTTTCAACAGTATGAAGCTACTGCCTTGTTGTGTTGCCTTGACCTCGCATCCATGAGCTGCAAGACAAGTTTGGGGTCAAGGAGCGAGCATGCTAGCTGT
TGGTTCGTCTGTTTAGTTGCATCGTTGGTTCAACTTGCATAAAGAATATCGTATATTTCCGACCTGCTATCATGAAAGATACAACTTAACAGAGGCCTTCACTGTTGCAA
GATGAATGCCATATTTGCATGAACCTTCATAGACATTCTAGTAGTGAAACTGACTTAATTATTCAGGAATGTAGCTTCCTTTCACTTGAACTTAATCCTTATTCAGGAGT
GTAGCTTGCTTTCCCTTTGATTGTAATTGCAACTTTGGCCTGATATTGGTCTTTTTTTTATTTTTTTATTATTATTATTATCTATTTATTTATTTTTCTAAATACAGTTG
C
Protein sequenceShow/hide protein sequence
MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFVCLVASLVQLA