| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025917.1 pol protein [Cucumis melo var. makuwa] | 1.1e-148 | 54.22 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
Query: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL--------------
GLMFE RLCVP D VKTELLTEAHS PF+MHPGSTKMYQDL+ CL
Subjt: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL--------------
Query: --------------------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP---------------------------
LKGYT IWV+VD+LTK+AHF+PG +TYTASKW QLYMT++VRL GVP
Subjt: --------------------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP---------------------------
Query: ---------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRA
TDGQTERLNQILE M RACVLEFSGSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CWGE TT+ AIQKIRA
Subjt: ---------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRA
Query: HMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYE
MLTAQSRQKSYA+ RR+DLEF+VGDMVFL+V PM+GVLRFEKKGKLS FVGPFEILERIGP+ YRLALPPSLSAVHDVFHVSMLR+YVADPTHIVD+E
Subjt: HMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYE
Query: LLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
LQ+++NLSYEEQPVEILA+E+K + + I LVKVLW+NH VEEAT ERE+DM+ Y
Subjt: LLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
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| KAA0048442.1 pol protein [Cucumis melo var. makuwa] | 1.9e-150 | 56.84 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-----------------------------------------------GLMFEKRL
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K GLMFE RL
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-----------------------------------------------GLMFEKRL
Query: CVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL----------------------------------------LKGYT
CVP D VKTELLTEAHS PF+MHPGSTKMYQDL+ CL LKGYT
Subjt: CVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL----------------------------------------LKGYT
Query: RIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLE
IWV+VD+LTKSAHF+PG +TYTASKW QLYMTK+VRL GVP TDGQTERLNQILE M RACVLE
Subjt: RIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLE
Query: FSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLR
FSGSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CWGE TT+ AIQKIRA MLTAQSRQKSYA+ RR+DLEF+VGDMV L+
Subjt: FSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLR
Query: VTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIA
V PM+GVLRF KKGKLS FVGPFEILERIGP+ YRLALPPS +AVHDVFH+SMLRKYVADPTH+VD+E LQI++NLSYEEQPVE+LA+EVK + + I
Subjt: VTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIA
Query: LVKVLWRNHEVEEATLEREDDMRAHY
LVKVLW+NH VE+AT E+E+DMRA +
Subjt: LVKVLWRNHEVEEATLEREDDMRAHY
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| KAA0053234.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 1.3e-149 | 56.11 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K GL+FE+RLCV
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
Query: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCL----------------------------------------LKGYTRI
P D VKTELL+EAHS PFSMHPGSTKMYQDLK+ CL LKG+T I
Subjt: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCL----------------------------------------LKGYTRI
Query: WVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFS
WV+VD+LTKSAHF+PG +TYTASKWAQLYM+++VRL GVP TDGQTERLNQ+LE M RAC LEF
Subjt: WVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFS
Query: GSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVT
GSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CW E +T+EAIQKI++ M TAQSRQKSYA+ RR+DLEF+VGD VFL+V
Subjt: GSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVT
Query: PMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALV
PM GVLRFE++GKLSSHFVGPFEILERIGP+ YRLALPPSLS VHDVFHVSMLRKYV DP+H+VDYE L+I++NLSY EQPVE+LA+EVK + + I LV
Subjt: PMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALV
Query: KVLWRNHEVEEATLEREDDMRAHY
KVLWRNH VEEAT EREDDMR+ Y
Subjt: KVLWRNHEVEEATLEREDDMRAHY
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| TYK01903.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 8.2e-149 | 58.13 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKAN+VADALS K GL+FE+RLCV
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
Query: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCLLKGYTR--------IWVIVDKLTKSAHFIPGNATYTASKWAQLYMTK
P D +KTELL+EAHS PF MHPGSTKMYQDLK+ CL+ + IWV+VD LTKSAHF+ G +TYTASKWAQLYM++
Subjt: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCLLKGYTR--------IWVIVDKLTKSAHFIPGNATYTASKWAQLYMTK
Query: VVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYG
+VRL GVP TDGQTERLNQ+LE M RAC LEF GSWDSHLHLM+FAYNNS+Q TIDMAPFE LYG
Subjt: VVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYG
Query: KSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPIT
K CRSP CWGE +T+ AIQKIR+ MLTAQSRQKSY + RR+DLEFDVGD VFL+V PM+GVLRFE++GKLS FVGP EILERIGP+T
Subjt: KSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPIT
Query: YRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
YRLALPPSLSAVHDVFHVSMLRKYV DP+H+VDYE L+I++NLSY ++PVE+LA+EVK++ N I LVKVLWRNH VEEAT EREDDMR+ Y
Subjt: YRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
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| TYK19164.1 pol protein [Cucumis melo var. makuwa] | 4.0e-148 | 55.83 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVV DALS K
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
Query: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ------------------------------GCL
GLMFE RLCVP D VKTELLTEAHS PF+MHPGSTKMYQ+L+
Subjt: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ------------------------------GCL
Query: LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFR
+KGYT IWV+VD+LTKSAHF+PG +TYTASKW QLYMT++VRL GVP TDGQTERLNQILE M R
Subjt: LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFR
Query: ACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGD
ACVLEFSGSWDSHLHLM+FAYNNSY+ TI MAPFE LYGK CRSP CWGE TT+ AIQKI+A MLTA SRQKSYA+ RR+DLEF+V D
Subjt: ACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGD
Query: MVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLIC
MVFL+V PM+GVLRFEKKGKLS FVGPFEILERIGP+ YRL LPPSLSAVHDVFHVSMLR+YVADP H+VD+E LQI++NLSYEEQPVEILA+EVK +
Subjt: MVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLIC
Query: NSGIALVKVLWRNHEVEEATLEREDDMRAHYL
+ I+LVKVLWRNH VEEAT ERE+DMRA YL
Subjt: NSGIALVKVLWRNHEVEEATLEREDDMRAHYL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TP01 Reverse transcriptase | 5.2e-149 | 54.22 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
Query: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL--------------
GLMFE RLCVP D VKTELLTEAHS PF+MHPGSTKMYQDL+ CL
Subjt: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL--------------
Query: --------------------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP---------------------------
LKGYT IWV+VD+LTK+AHF+PG +TYTASKW QLYMT++VRL GVP
Subjt: --------------------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP---------------------------
Query: ---------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRA
TDGQTERLNQILE M RACVLEFSGSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CWGE TT+ AIQKIRA
Subjt: ---------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRA
Query: HMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYE
MLTAQSRQKSYA+ RR+DLEF+VGDMVFL+V PM+GVLRFEKKGKLS FVGPFEILERIGP+ YRLALPPSLSAVHDVFHVSMLR+YVADPTHIVD+E
Subjt: HMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYE
Query: LLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
LQ+++NLSYEEQPVEILA+E+K + + I LVKVLW+NH VEEAT ERE+DM+ Y
Subjt: LLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
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| A0A5A7TY28 Reverse transcriptase | 9.4e-151 | 56.84 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-----------------------------------------------GLMFEKRL
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K GLMFE RL
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-----------------------------------------------GLMFEKRL
Query: CVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL----------------------------------------LKGYT
CVP D VKTELLTEAHS PF+MHPGSTKMYQDL+ CL LKGYT
Subjt: CVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK----------------QGCL----------------------------------------LKGYT
Query: RIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLE
IWV+VD+LTKSAHF+PG +TYTASKW QLYMTK+VRL GVP TDGQTERLNQILE M RACVLE
Subjt: RIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLE
Query: FSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLR
FSGSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CWGE TT+ AIQKIRA MLTAQSRQKSYA+ RR+DLEF+VGDMV L+
Subjt: FSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLR
Query: VTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIA
V PM+GVLRF KKGKLS FVGPFEILERIGP+ YRLALPPS +AVHDVFH+SMLRKYVADPTH+VD+E LQI++NLSYEEQPVE+LA+EVK + + I
Subjt: VTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIA
Query: LVKVLWRNHEVEEATLEREDDMRAHY
LVKVLW+NH VE+AT E+E+DMRA +
Subjt: LVKVLWRNHEVEEATLEREDDMRAHY
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| A0A5A7UDB1 Reverse transcriptase | 6.1e-150 | 56.11 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K GL+FE+RLCV
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
Query: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCL----------------------------------------LKGYTRI
P D VKTELL+EAHS PFSMHPGSTKMYQDLK+ CL LKG+T I
Subjt: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCL----------------------------------------LKGYTRI
Query: WVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFS
WV+VD+LTKSAHF+PG +TYTASKWAQLYM+++VRL GVP TDGQTERLNQ+LE M RAC LEF
Subjt: WVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFS
Query: GSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVT
GSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CW E +T+EAIQKI++ M TAQSRQKSYA+ RR+DLEF+VGD VFL+V
Subjt: GSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVT
Query: PMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALV
PM GVLRFE++GKLSSHFVGPFEILERIGP+ YRLALPPSLS VHDVFHVSMLRKYV DP+H+VDYE L+I++NLSY EQPVE+LA+EVK + + I LV
Subjt: PMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALV
Query: KVLWRNHEVEEATLEREDDMRAHY
KVLWRNH VEEAT EREDDMR+ Y
Subjt: KVLWRNHEVEEATLEREDDMRAHY
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| A0A5D3BQD5 Reverse transcriptase | 3.9e-149 | 58.13 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKAN+VADALS K GL+FE+RLCV
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK---------------------------------------------GLMFEKRLCV
Query: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCLLKGYTR--------IWVIVDKLTKSAHFIPGNATYTASKWAQLYMTK
P D +KTELL+EAHS PF MHPGSTKMYQDLK+ CL+ + IWV+VD LTKSAHF+ G +TYTASKWAQLYM++
Subjt: PVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ----------------GCLLKGYTR--------IWVIVDKLTKSAHFIPGNATYTASKWAQLYMTK
Query: VVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYG
+VRL GVP TDGQTERLNQ+LE M RAC LEF GSWDSHLHLM+FAYNNS+Q TIDMAPFE LYG
Subjt: VVRLRGVP------------------------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYG
Query: KSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPIT
K CRSP CWGE +T+ AIQKIR+ MLTAQSRQKSY + RR+DLEFDVGD VFL+V PM+GVLRFE++GKLS FVGP EILERIGP+T
Subjt: KSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPIT
Query: YRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
YRLALPPSLSAVHDVFHVSMLRKYV DP+H+VDYE L+I++NLSY ++PVE+LA+EVK++ N I LVKVLWRNH VEEAT EREDDMR+ Y
Subjt: YRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHY
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| A0A5D3D6H0 Pol protein | 2.0e-148 | 55.83 | Show/hide |
Query: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
L+ F KELNMRQ RWL+LVKDYDCEILYHPGKANVV DALS K
Subjt: LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK-------------------------------------------------------
Query: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ------------------------------GCL
GLMFE RLCVP D VKTELLTEAHS PF+MHPGSTKMYQ+L+
Subjt: -----------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ------------------------------GCL
Query: LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFR
+KGYT IWV+VD+LTKSAHF+PG +TYTASKW QLYMT++VRL GVP TDGQTERLNQILE M R
Subjt: LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFR
Query: ACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGD
ACVLEFSGSWDSHLHLM+FAYNNSY+ TI MAPFE LYGK CRSP CWGE TT+ AIQKI+A MLTA SRQKSYA+ RR+DLEF+V D
Subjt: ACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGD
Query: MVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLIC
MVFL+V PM+GVLRFEKKGKLS FVGPFEILERIGP+ YRL LPPSLSAVHDVFHVSMLR+YVADP H+VD+E LQI++NLSYEEQPVEILA+EVK +
Subjt: MVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLIC
Query: NSGIALVKVLWRNHEVEEATLEREDDMRAHYL
+ I+LVKVLWRNH VEEAT ERE+DMRA YL
Subjt: NSGIALVKVLWRNHEVEEATLEREDDMRAHYL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 1.2e-22 | 28.35 | Show/hide |
Query: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
GY ++V+VD+ +K A +P + TA + A+++ +V+ G P TDGQTER NQ +E + R
Subjt: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
Query: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
+W H+ L++ +YNN+ + M PFE+++ S SP + T + Q ++ H+ T + K Y + + +++ EF GD+V
Subjt: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
Query: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
++ T G L K KL+ F GPF +L++ GP Y L LP S+ + FHVS L KY
Subjt: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
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| P0CT35 Transposon Tf2-2 polyprotein | 1.2e-22 | 28.35 | Show/hide |
Query: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
GY ++V+VD+ +K A +P + TA + A+++ +V+ G P TDGQTER NQ +E + R
Subjt: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
Query: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
+W H+ L++ +YNN+ + M PFE+++ S SP + T + Q ++ H+ T + K Y + + +++ EF GD+V
Subjt: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
Query: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
++ T G L K KL+ F GPF +L++ GP Y L LP S+ + FHVS L KY
Subjt: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
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| P0CT36 Transposon Tf2-3 polyprotein | 1.2e-22 | 28.35 | Show/hide |
Query: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
GY ++V+VD+ +K A +P + TA + A+++ +V+ G P TDGQTER NQ +E + R
Subjt: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
Query: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
+W H+ L++ +YNN+ + M PFE+++ S SP + T + Q ++ H+ T + K Y + + +++ EF GD+V
Subjt: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
Query: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
++ T G L K KL+ F GPF +L++ GP Y L LP S+ + FHVS L KY
Subjt: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
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| P0CT41 Transposon Tf2-12 polyprotein | 1.2e-22 | 28.35 | Show/hide |
Query: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
GY ++V+VD+ +K A +P + TA + A+++ +V+ G P TDGQTER NQ +E + R
Subjt: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
Query: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
+W H+ L++ +YNN+ + M PFE+++ S SP + T + Q ++ H+ T + K Y + + +++ EF GD+V
Subjt: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
Query: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
++ T G L K KL+ F GPF +L++ GP Y L LP S+ + FHVS L KY
Subjt: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.2e-22 | 28.35 | Show/hide |
Query: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
GY ++V+VD+ +K A +P + TA + A+++ +V+ G P TDGQTER NQ +E + R
Subjt: GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP------------------------------------TDGQTERLNQILEGMFRAC
Query: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
+W H+ L++ +YNN+ + M PFE+++ S SP + T + Q ++ H+ T + K Y + + +++ EF GD+V
Subjt: VLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQKSYANERRRDL-EFDVGDMVF
Query: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
++ T G L K KL+ F GPF +L++ GP Y L LP S+ + FHVS L KY
Subjt: LRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAV-HDVFHVSMLRKY
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