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CSPI03G20750 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G20750
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionzinc finger MYM-type protein 1-like
Genome locationChr3:16764556..16765388
RNA-Seq ExpressionCSPI03G20750
SyntenyCSPI03G20750
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR025398 - Domain of unknown function DUF4371


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449194.1 PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo]1.3e-2453.68Show/hide
Query:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ------------------------------------------------------EIAG
        MSNQARIDYRIRL ATIDCARFLLQQGLPFRGHDETEDSKNQ                                                      EIAG
Subjt:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ------------------------------------------------------EIAG

Query:  LFIFVVNVVNVISALAKHRDMLREKYSANTFEALNN
        LF+ VVNVVNVI   AK +DMLREK+SANTFEALNN
Subjt:  LFIFVVNVVNVISALAKHRDMLREKYSANTFEALNN

XP_008465647.1 PREDICTED: uncharacterized protein LOC103503287, partial [Cucumis melo]4.7e-2738.43Show/hide
Query:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----------------------------------------------------------
        MSNQARIDYRIRL ATIDCARFLLQQGLPFR HDETEDSKNQ                                                          
Subjt:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----------------------------------------------------------

Query:  --------------------------------------------------------------------------------EIAGLFIFVVNVVNVISALA
                                                                                        E+AGLF+ VVNVVNVI A A
Subjt:  --------------------------------------------------------------------------------EIAGLFIFVVNVVNVISALA

Query:  KHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K RDMLREK+SANTF+ALNNGELSSG+GLNQETMIKRPGDTR
Subjt:  KHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

XP_011658426.2 zinc finger MYM-type protein 1 [Cucumis sativus]1.9e-2032.01Show/hide
Query:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----------------------------------------------------------
        MS+QA+IDY IRL ATIDCARFLLQQGLPFRGHDETEDSKNQ                                                          
Subjt:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------EIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDT
                         EI GLFI VVNVV+VI A  KHRDML+EK+SANTFEALNNGELSSG+GLNQET IKRPGDT
Subjt:  -----------------EIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDT

XP_029148316.1 uncharacterized protein LOC112742890 [Arachis hypogaea]7.3e-2050.88Show/hide
Query:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQEIAGLFIFVVNVV-----------NVISALAKHRDMLREKYSANTFEALNNGELSSGKG
        S QA+ +Y+I L ATIDC RFLL+QGL FRG+DET+DS NQ   G F+ ++N +             I A  K RDMLR+     T EAL +GE++SG+G
Subjt:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQEIAGLFIFVVNVV-----------NVISALAKHRDMLREKYSANTFEALNNGELSSGKG

Query:  LNQETMIKRPGDTR
        LNQE  +KR GDTR
Subjt:  LNQETMIKRPGDTR

XP_034198219.1 uncharacterized protein LOC117613754, partial [Prunus dulcis]1.3e-1951.82Show/hide
Query:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----EIAGLFIFVV---NVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQE
        S+QARIDYRI L A++DC RFLL+QGLPFRG+DE++ S N+    E+  L I ++        I A  + RDMLR++   N  EAL N +L +G+GLNQE
Subjt:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----EIAGLFIFVV---NVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQE

Query:  TMIKRPGDTR
        T +KR GDTR
Subjt:  TMIKRPGDTR

TrEMBL top hitse value%identityAlignment
A0A1S3BM43 uncharacterized protein LOC1034911456.3e-2553.68Show/hide
Query:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ------------------------------------------------------EIAG
        MSNQARIDYRIRL ATIDCARFLLQQGLPFRGHDETEDSKNQ                                                      EIAG
Subjt:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ------------------------------------------------------EIAG

Query:  LFIFVVNVVNVISALAKHRDMLREKYSANTFEALNN
        LF+ VVNVVNVI   AK +DMLREK+SANTFEALNN
Subjt:  LFIFVVNVVNVISALAKHRDMLREKYSANTFEALNN

A0A1S3CPC9 uncharacterized protein LOC1035032872.3e-2738.43Show/hide
Query:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----------------------------------------------------------
        MSNQARIDYRIRL ATIDCARFLLQQGLPFR HDETEDSKNQ                                                          
Subjt:  MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ----------------------------------------------------------

Query:  --------------------------------------------------------------------------------EIAGLFIFVVNVVNVISALA
                                                                                        E+AGLF+ VVNVVNVI A A
Subjt:  --------------------------------------------------------------------------------EIAGLFIFVVNVVNVISALA

Query:  KHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K RDMLREK+SANTF+ALNNGELSSG+GLNQETMIKRPGDTR
Subjt:  KHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

A0A5E4G917 PREDICTED: zinc finger MYM-type 1 (Fragment)7.2e-1366.15Show/hide
Query:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K+ EIA LF  V NVVNV+ A AKHRDMLREK++   FEALNN EL SG+GLN ET +KR  DTR
Subjt:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

A0A6P5TRY7 uncharacterized protein LOC1107701135.5e-1366.15Show/hide
Query:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K+ EIA LF  V NVVNV+ A AK RDMLREK++   FEALNN EL SG+GLNQET +KR  DTR
Subjt:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

A0A6P5U698 zinc finger MYM-type protein 1-like1.3e-1432.35Show/hide
Query:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ-----------------------------------------------------------
        SNQ RIDY  RL A++  +R LLQQGLPFRGHDE+E+S NQ                                                           
Subjt:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ-----------------------------------------------------------

Query:  ------------------------------------------EIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRP
                                                  E+  LF  V NVVNV+ A AK RDMLREK+    F+ALNN EL SG+GLNQET +KR 
Subjt:  ------------------------------------------EIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRP

Query:  GDTR
         DT+
Subjt:  GDTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain1.1e-0838.46Show/hide
Query:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K+ E+   F  +  ++NV+ A  K +D +RE +     E ++NGE+ +G GLNQE  ++RPG+TR
Subjt:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain6.9e-0868.57Show/hide
Query:  DYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ
        DYRI L A+ID +R LL QGLPFRGHDE+E+S N+
Subjt:  DYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ

AT1G41920.1 General transcription factor 2-related zinc finger protein9.6e-1041.54Show/hide
Query:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K  E+   F  +  ++NV+ A  K +D +RE+Y     E +N GE+ +GKGLNQE  ++RPG+TR
Subjt:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

AT3G29450.1 General transcription factor 2-related zinc finger protein6.2e-0938.46Show/hide
Query:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K+ EI   F  +  ++NV+ A  K +D +R+++     E +N GE+ +GKGLNQ+  ++RPG+TR
Subjt:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

AT3G29763.1 General transcription factor 2-related zinc finger protein2.1e-0963.41Show/hide
Query:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ
        +N  + DYRIRL A+ID +R LL QGLPFRGHDE+E+S N+
Subjt:  SNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQ

AT3G29763.1 General transcription factor 2-related zinc finger protein2.0e-0736.92Show/hide
Query:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        K+ E+   F  +  ++NV+ A  K +D +RE       E ++NGE+ +G  LNQE  ++RPG+TR
Subjt:  KNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR

AT3G31402.2 General transcription factor 2-related zinc finger protein3.6e-0937.63Show/hide
Query:  LLQQGLPFRGHDETEDSKNQEIAGLFIFVVNVVNV-----------ISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR
        L +QGL FRGH ++E+S N+   G F+ ++  +N+           I A  K +D++REK+     E + NGE+S+   LNQE  ++RPG TR
Subjt:  LLQQGLPFRGHDETEDSKNQEIAGLFIFVVNVVNV-----------ISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATCAAGCAAGAATTGACTATCGGATTCGATTATGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGGCACGATGAAACTGA
AGATTCAAAAAATCAAGAGATTGCTGGTCTTTTTATTTTCGTTGTAAATGTGGTGAATGTTATTAGTGCATTAGCAAAACATCGAGACATGCTAAGAGAGAAATATAGTG
CCAACACTTTTGAAGCTTTGAATAATGGTGAACTGTCAAGTGGAAAAGGATTAAATCAGGAAACAATGATCAAACGACCAGGAGATACACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTAATCAAGCAAGAATTGACTATCGGATTCGATTATGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGGCACGATGAAACTGA
AGATTCAAAAAATCAAGAGATTGCTGGTCTTTTTATTTTCGTTGTAAATGTGGTGAATGTTATTAGTGCATTAGCAAAACATCGAGACATGCTAAGAGAGAAATATAGTG
CCAACACTTTTGAAGCTTTGAATAATGGTGAACTGTCAAGTGGAAAAGGATTAAATCAGGAAACAATGATCAAACGACCAGGAGATACACGATAG
Protein sequenceShow/hide protein sequence
MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR