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CSPI03G21410 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G21410
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionFanconi anemia group M protein isoform X6
Genome locationChr3:17647837..17648598
RNA-Seq ExpressionCSPI03G21410
SyntenyCSPI03G21410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037083.1 Fanconi anemia group M protein isoform X6 [Cucumis melo var. makuwa]5.0e-2259.68Show/hide
Query:  ENKAHISSNFNLS---PIKISDSNINLVRGTLHSASNITNSGEEKLDDEVSIIGTSTEELEPFNLEERDD--AYFKANNLDDALGLDLPKLFLTPEPKVC
        E +A +SS+  LS     KI  S  + +   + SAS  +   E    D ++I   S+EELEP +LEERDD  A FK NNLDDALG DLPKLFLTPEPK C
Subjt:  ENKAHISSNFNLS---PIKISDSNINLVRGTLHSASNITNSGEEKLDDEVSIIGTSTEELEPFNLEERDD--AYFKANNLDDALGLDLPKLFLTPEPKVC

Query:  IKELAESFPAELVPFIAACGIDLI
         KELAESFPAELVPFIAACGIDLI
Subjt:  IKELAESFPAELVPFIAACGIDLI

KAA0045287.1 uncharacterized protein E6C27_scaffold316G00450 [Cucumis melo var. makuwa]9.8e-1060.32Show/hide
Query:  NRKSPVQTVVKDLQK------FYIKGRSSFQNAWTALLNFDLLEESCVEIQTFGLECKRSENK
        N+  P   + KDL+K      FYIKGRSSFQNAW AL+N DLLEES V+IQT G+ECKR ++K
Subjt:  NRKSPVQTVVKDLQK------FYIKGRSSFQNAWTALLNFDLLEESCVEIQTFGLECKRSENK

KAE8652235.1 hypothetical protein Csa_023977, partial [Cucumis sativus]9.0e-4080Show/hide
Query:  ENKAHISSNFNLSPIKISDSNINLVRGTLHSASNITNSGEEKLDDEVSIIGTSTEELEPFNLEERDD--AYFKANNLDDALGLDLPKLFLTPEPKVCIKE
        ENK HISS+FNLSPIKIS+S+INLVRGTLHS+SNITNS +EKLDDEVSI+ TS+EELE  +L+ERDD  A F+ANNLDD+LGLDLPKLFLTPEPK C KE
Subjt:  ENKAHISSNFNLSPIKISDSNINLVRGTLHSASNITNSGEEKLDDEVSIIGTSTEELEPFNLEERDD--AYFKANNLDDALGLDLPKLFLTPEPKVCIKE

Query:  LAESFPAELVPFIAA
        LAESF AELVP+IAA
Subjt:  LAESFPAELVPFIAA

TrEMBL top hitse value%identityAlignment
A0A5A7T298 Fanconi anemia group M protein isoform X62.4e-2259.68Show/hide
Query:  ENKAHISSNFNLS---PIKISDSNINLVRGTLHSASNITNSGEEKLDDEVSIIGTSTEELEPFNLEERDD--AYFKANNLDDALGLDLPKLFLTPEPKVC
        E +A +SS+  LS     KI  S  + +   + SAS  +   E    D ++I   S+EELEP +LEERDD  A FK NNLDDALG DLPKLFLTPEPK C
Subjt:  ENKAHISSNFNLS---PIKISDSNINLVRGTLHSASNITNSGEEKLDDEVSIIGTSTEELEPFNLEERDD--AYFKANNLDDALGLDLPKLFLTPEPKVC

Query:  IKELAESFPAELVPFIAACGIDLI
         KELAESFPAELVPFIAACGIDLI
Subjt:  IKELAESFPAELVPFIAACGIDLI

A0A5A7TTX5 Uncharacterized protein4.7e-1060.32Show/hide
Query:  NRKSPVQTVVKDLQK------FYIKGRSSFQNAWTALLNFDLLEESCVEIQTFGLECKRSENK
        N+  P   + KDL+K      FYIKGRSSFQNAW AL+N DLLEES V+IQT G+ECKR ++K
Subjt:  NRKSPVQTVVKDLQK------FYIKGRSSFQNAWTALLNFDLLEESCVEIQTFGLECKRSENK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCTCTTGGTAAACCCAATTCACCAGCCAACTTCTGAACTGCCCACTGCCACTGTAACTCCCTCTTCATTCTGCCTCGGGCCCCACCAAGAATATCCTTTTTG
CCCTGATACTCTCCAAGAACCTTGCAACTCCACTATTTTTAATTCTTCCAAAGGAGAAGGAGAAGGAGAAGAGCATAACAAGCGCCAAAATTCAAACTCAAAAAGTCCCC
TGTTCAAAGGAAGAAAAGGACCAAACAGAAAGTCCCCTGTTCAAACAGTGGTTAAGGACCTCCAGAAATTCTACATCAAAGGAAGAAGCTCATTTCAAAATGCTTGGACT
GCCCTCCTGAATTTTGATTTACTTGAGGAAAGTTGTGTGGAAATTCAAACTTTTGGATTAGAATGCAAAAGGTCAGAAAATAAAGCTCACATCTCTTCAAATTTTAATCT
ATCTCCTATAAAAATTTCAGACTCGAACATTAATCTTGTGCGAGGTACTCTACATTCAGCGTCAAATATTACAAATTCTGGCGAAGAGAAATTAGATGATGAAGTTTCCA
TAATCGGTACCAGCACTGAAGAATTAGAACCGTTTAATTTAGAGGAGAGAGATGACGCGTATTTCAAGGCAAATAATCTGGATGATGCATTGGGTCTAGATCTTCCTAAG
TTATTTCTCACCCCTGAACCCAAGGTTTGCATTAAAGAATTGGCAGAAAGCTTTCCTGCAGAATTAGTCCCTTTCATTGCTGCTTGTGGAATTGATCTTATC
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGCTCTTGGTAAACCCAATTCACCAGCCAACTTCTGAACTGCCCACTGCCACTGTAACTCCCTCTTCATTCTGCCTCGGGCCCCACCAAGAATATCCTTTTTG
CCCTGATACTCTCCAAGAACCTTGCAACTCCACTATTTTTAATTCTTCCAAAGGAGAAGGAGAAGGAGAAGAGCATAACAAGCGCCAAAATTCAAACTCAAAAAGTCCCC
TGTTCAAAGGAAGAAAAGGACCAAACAGAAAGTCCCCTGTTCAAACAGTGGTTAAGGACCTCCAGAAATTCTACATCAAAGGAAGAAGCTCATTTCAAAATGCTTGGACT
GCCCTCCTGAATTTTGATTTACTTGAGGAAAGTTGTGTGGAAATTCAAACTTTTGGATTAGAATGCAAAAGGTCAGAAAATAAAGCTCACATCTCTTCAAATTTTAATCT
ATCTCCTATAAAAATTTCAGACTCGAACATTAATCTTGTGCGAGGTACTCTACATTCAGCGTCAAATATTACAAATTCTGGCGAAGAGAAATTAGATGATGAAGTTTCCA
TAATCGGTACCAGCACTGAAGAATTAGAACCGTTTAATTTAGAGGAGAGAGATGACGCGTATTTCAAGGCAAATAATCTGGATGATGCATTGGGTCTAGATCTTCCTAAG
TTATTTCTCACCCCTGAACCCAAGGTTTGCATTAAAGAATTGGCAGAAAGCTTTCCTGCAGAATTAGTCCCTTTCATTGCTGCTTGTGGAATTGATCTTATC
Protein sequenceShow/hide protein sequence
MRKLLVNPIHQPTSELPTATVTPSSFCLGPHQEYPFCPDTLQEPCNSTIFNSSKGEGEGEEHNKRQNSNSKSPLFKGRKGPNRKSPVQTVVKDLQKFYIKGRSSFQNAWT
ALLNFDLLEESCVEIQTFGLECKRSENKAHISSNFNLSPIKISDSNINLVRGTLHSASNITNSGEEKLDDEVSIIGTSTEELEPFNLEERDDAYFKANNLDDALGLDLPK
LFLTPEPKVCIKELAESFPAELVPFIAACGIDLI