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CSPI03G21470 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G21470
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:17726104..17726743
RNA-Seq ExpressionCSPI03G21470
SyntenyCSPI03G21470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]2.4e-0436.97Show/hide
Query:  MATPTTTTMVAVAIIVVVSTIGASHCKAAS-LNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCL
        MAT    +  A+ I+++  TI +S+C AAS L SN  NET TA TS+ +CN L ++C   VE++ I        Y+T RT +   +VCGR       +C+
Subjt:  MATPTTTTMVAVAIIVVVSTIGASHCKAAS-LNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCL

Query:  -PQKRPNPIQKCSTFTRSC
          Q  P P    S + R+C
Subjt:  -PQKRPNPIQKCSTFTRSC
KGN57814.1 hypothetical protein Csa_009509 [Cucumis sativus]2.2e-63100Show/hide
Query:  MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRV
        MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRV
Subjt:  MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRV

Query:  GRYDNQRCLPQKRPNPIQKCSTFTRSC
        GRYDNQRCLPQKRPNPIQKCSTFTRSC
Subjt:  GRYDNQRCLPQKRPNPIQKCSTFTRSC
TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein1.1e-0436.97Show/hide
Query:  MATPTTTTMVAVAIIVVVSTIGASHCKAAS-LNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCL
        MAT    +  A+ I+++  TI +S+C AAS L SN  NET TA TS+ +CN L ++C   VE++ I        Y+T RT +   +VCGR       +C+
Subjt:  MATPTTTTMVAVAIIVVVSTIGASHCKAAS-LNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCL

Query:  -PQKRPNPIQKCSTFTRSC
          Q  P P    S + R+C
Subjt:  -PQKRPNPIQKCSTFTRSC
A0A0A0LA12 Uncharacterized protein1.1e-63100Show/hide
Query:  MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRV
        MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRV
Subjt:  MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRV

Query:  GRYDNQRCLPQKRPNPIQKCSTFTRSC
        GRYDNQRCLPQKRPNPIQKCSTFTRSC
Subjt:  GRYDNQRCLPQKRPNPIQKCSTFTRSC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACATTCTTCAAACACCAAAACATCAATGGCAACACCGACAACAACAACAATGGTAGCGGTAGCCATTATTGTGGTGGTTTCAACTATAGGTGCAAGTCATTGCAA
GGCTGCTTCTCTAAATTCAAACTTGGGCAATGAAACCACCACGGCAGCTACATCATCCACATGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGACA
ACATTGAAACCTCAGCATTTCCAAGCTTATATAATACTGTGCGGACTGCAAATGGGCAAAAGGCAGTATGTGGTCGGGTGGGAAGATACGATAACCAGAGATGTCTCCCC
CAGAAGAGGCCCAACCCGATTCAAAAATGTTCTACATTTACTCGCAGCTGTTAA
mRNA sequenceShow/hide mRNA sequence
CTCAAAACTGGCCTAAAGATTTTTGTCCTCTCTCTCTTCTCATCTAATTCATGCCACATTCTTCAAACACCAAAACATCAATGGCAACACCGACAACAACAACAATGGTA
GCGGTAGCCATTATTGTGGTGGTTTCAACTATAGGTGCAAGTCATTGCAAGGCTGCTTCTCTAAATTCAAACTTGGGCAATGAAACCACCACGGCAGCTACATCATCCAC
ATGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGACAACATTGAAACCTCAGCATTTCCAAGCTTATATAATACTGTGCGGACTGCAAATGGGCAAA
AGGCAGTATGTGGTCGGGTGGGAAGATACGATAACCAGAGATGTCTCCCCCAGAAGAGGCCCAACCCGATTCAAAAATGTTCTACATTTACTCGCAGCTGTTAATCACCA
ACACCAAGTAATTAGAAAGTGAACAGAAAATTCAATGTCGACACATGTGGTTTTCACATTTTCTTTTATTTTTATTTTTAAAATTTGGAGTGAAGTTTATATGTTATTTA
CTACCTACCTTACTTAATTAATGTCGCTTGTATTTATCTAATCACTCTGCTTTCGCTAAGCTTAACTTCTTCTTTCTTCTTTCACCTTCA
Protein sequenceShow/hide protein sequence
MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLP
QKRPNPIQKCSTFTRSC