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CSPI03G21850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G21850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationChr3:18304947..18305767
RNA-Seq ExpressionCSPI03G21850
SyntenyCSPI03G21850
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060761.1 formin-like protein 3 [Cucumis melo var. makuwa]1.3e-6590Show/hide
Query:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTY
        M  SAAILL FSFLS LLLLA+SQTSSPI +DPQN DAEIKCGSCPCSNPCIQQLS   PPPPPPPPPSPCTPTVSSRPPPPRFIYT SSPAPPPPRFTY
Subjt:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTY

Query:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TTGVPGNLYEIDANNSWYYFSGT  TRPGMAAVVVA+GCGALHLMGFSKW
Subjt:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

KAE8650628.1 hypothetical protein Csa_011452 [Cucumis sativus]1.1e-7297.32Show/hide
Query:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILL FSFLSHLLLLANSQTSSPILVDPQN DAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGF
        TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGF
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGF

KAE8653002.1 hypothetical protein Csa_004575 [Cucumis sativus]7.3e-6197.67Show/hide
Query:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILL FSFLSHLLLLANSQTSSPILVDPQN DAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTR
        TYTTGVPGNLYEIDANNSWYYFSGTRRTR
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTR

XP_011651408.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]3.1e-7597.37Show/hide
Query:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILL FSFLSHLLLLANSQTSSPILVDPQN DAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

XP_023528316.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]1.9e-4569.08Show/hide
Query:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAPSAAI L  SFL   L LA+SQ  SP  VDPQ+ ++EIKCGSCPCSNPC++Q     PPPPPPPPP  C P +   PPPPRFIYT  SP PPPPRF
Subjt:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
         YTTGVPGNLY+IDANN WYYFSGT R RP  A +VVA+GCGAL+LM F KW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

TrEMBL top hitse value%identityAlignment
A0A0A0L7R0 Uncharacterized protein1.5e-7597.37Show/hide
Query:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
        MKMAP AAILL FSFLSHLLLLANSQTSSPILVDPQN DAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF
Subjt:  MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRF

Query:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGFSKW
Subjt:  TYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

A0A5A7V4T2 Formin-like protein 36.2e-6690Show/hide
Query:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTY
        M  SAAILL FSFLS LLLLA+SQTSSPI +DPQN DAEIKCGSCPCSNPCIQQLS   PPPPPPPPPSPCTPTVSSRPPPPRFIYT SSPAPPPPRFTY
Subjt:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTY

Query:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TTGVPGNLYEIDANNSWYYFSGT  TRPGMAAVVVA+GCGALHLMGFSKW
Subjt:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

A0A6A1VEJ2 Uncharacterized protein2.6e-1947.52Show/hide
Query:  ILLFFSFLSHLLLLANSQTSSPILVD---PQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTG
        +LL F F+S    + +    S +L +   PQ +DAEIKCG+CPC NPC QQ  P PPPPPPPPPP P  P  +     P   Y T   APPPPRF Y TG
Subjt:  ILLFFSFLSHLLLLANSQTSSPILVD---PQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTG

Query:  VPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHL
        VPG+LY  D  N+W Y+SG  R    +A +++ + CG L L
Subjt:  VPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHL

A0A6J1GAW3 leucine-rich repeat extensin-like protein 22.0e-2454.61Show/hide
Query:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFT
        MAPSAAI     FLS  LLL+  QTS PI   P + D EI C S   CSNP +QQL P PP PPPP              PPPRF YTT S  PPP RF 
Subjt:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCP-CSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFT

Query:  YTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAA-VVVAIGCGALHLMGFSKW
        YTTGVP +LY+ D  N WYYFSG     P MAA VVV + CGAL L+ F KW
Subjt:  YTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAA-VVVAIGCGALHLMGFSKW

A0A6J1J7W0 probable pathogenesis-related protein ARB_028612.5e-4368Show/hide
Query:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTY
        MAPSAAI L  SFL   L LANSQ  SP  VDPQ+ ++EIKCGSCPCSNPC++Q      PPPPPPPP  C P +   PPPPRFIYT+ SP PPPPRF Y
Subjt:  MAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTY

Query:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW
        TTGVPGNLY+IDANN WYYFSGT R     AA+VVA+GCGAL+LM F KW
Subjt:  TTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein2.7e-0540Show/hide
Query:  LSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPP------PPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGN
        L+  +L+A    +SPI+++ ++S AE+         PC+Q   PPPP PPP      PPPPSP  P  SS PP P        P PPPP + +T   PG+
Subjt:  LSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPP------PPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGN

Query:  LYEID
        LY I+
Subjt:  LYEID

AT1G23040.1 hydroxyproline-rich glycoprotein family protein3.8e-0743.01Show/hide
Query:  LANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEID
        L N  +SS   ++ +  D   +     CS  CIQ  +PPPP PPPP PP P  P   + PPPP    ++  P PPP  F Y TG PGNLY +D
Subjt:  LANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEID

AT1G70990.1 proline-rich family protein3.6e-0538.05Show/hide
Query:  APSAAILLFFSFLSHLLLL--ANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFT
        A +A +L    FL+  +++  ++S T+  +  DP      IKC       PC+Q + PP PPPP PPPPS   P     P PP+  Y      PPP  + 
Subjt:  APSAAILLFFSFLSHLLLL--ANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFT

Query:  YTTGVPGNLYEID
        Y TG PG LY ID
Subjt:  YTTGVPGNLYEID

AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein3.1e-0942.25Show/hide
Query:  TVSSRPPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALH
        T   RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S   R       V+V +G G ++
Subjt:  TVSSRPPPPRFIY-TTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALH

AT3G22800.1 Leucine-rich repeat (LRR) family protein3.0e-0445.33Show/hide
Query:  SDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPP-PPRFTYTTGVPGNLY
        S   I C S  CS P      PPPPPPPPPPPP P  P     PPPP ++Y +  P PP PP + Y    P  +Y
Subjt:  SDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPP-PPRFTYTTGVPGNLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTTCTTTTCTTTCCTCTCCCACCTCCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATTGGTAGATCCTCAAAA
TTCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTGTA
CTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTG
TACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAAT
GGGGTTTAGTAAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
TGCAAATGGACCAAAATACCCTTCTGTTCAAAGTATTCCCATGCACCTAACTCAACCAAAATAACAAAACCTACACTCACCTTCGCATTAACTCTCTCTCTCTCTCTCTC
TCTCCACAAACTCAATCCTCATCGATTTTAGAGCTTTTTCTTTACATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTTCTTTTCTTTCCTCTCCCACCTCCTTCTTCT
CGCCAACTCCCAAACCTCCTCCCCGATATTGGTAGATCCTCAAAATTCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGC
CACCACCGCCGCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTGTACTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCA
CCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCAT
GGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGCAAGTTAATGTGTTGAATTTGGTCT
AGTTACTAAAAGAAATATATTCACTCTTAGTTCATCATAAAGTATAAGTATATATATATATATATATATTATGATCTTAATTATTAGATGTCTATTTATTTACCTTTTAT
TTCAACAAAATTTATTTATATTTTCTTTCAATATAATTTTGGGGTTATATA
Protein sequenceShow/hide protein sequence
MKMAPSAAILLFFSFLSHLLLLANSQTSSPILVDPQNSDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNL
YEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW