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CSPI03G21870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G21870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCold-regulated protein, putative
Genome locationChr3:18325730..18326435
RNA-Seq ExpressionCSPI03G21870
SyntenyCSPI03G21870
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060760.1 uncharacterized protein E6C27_scaffold72G00590 [Cucumis melo var. makuwa]7.1e-3694.81Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MGV LGVP CI+CGTHRNPCRCR+VGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
KAE8650630.1 hypothetical protein Csa_009886 [Cucumis sativus]2.3e-34100Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSV
        MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSV
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSV
XP_004150936.1 uncharacterized protein LOC101215155 [Cucumis sativus]7.6e-38100Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]6.2e-3281.82Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M V +GVP+C+ECGTHRNPCRC++VGP+LGFLA  V AVVEWPVGALVY FRHHKGRRIM HPVTVVYPSVSNA+PI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]4.7e-3283.12Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M V +GVPIC+ECGTHRNPCRC++VGP+LGFLA  V AVVEWPVGALVY FRHHKGRRIM HPVTVVYPSVSNA+PI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
TrEMBL top hitse value%identityAlignment
A0A0A0L786 Uncharacterized protein3.7e-38100Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
A0A0A0LA45 Uncharacterized protein1.5e-3181.82Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MGV +GVPICIECGTH NPCRC++VGP+LGFLA  V AVVEWPVGALV+ FRHHKGRRIM HP TVVYPSVSNA+PI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
A0A1S3C5C8 uncharacterized protein LOC1034968427.4e-3181.82Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M V +GVPICIECGTH NPCRC++VGP+LGFLA  V AVVEWPVGALV+ FRHHKGRRIM HP TVVYPSVSNAIPI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
A0A5A7V0B2 Uncharacterized protein3.4e-3694.81Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        MGV LGVP CI+CGTHRNPCRCR+VGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
A0A6J1FA13 uncharacterized protein LOC1114421903.0e-3281.82Show/hide
Query:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        M V +GVP+C+ECGTHRNPCRC++VGP+LGFLA  V AVVEWPVGALVY FRHHKGRRIM HPVTVVYPSVSNA+PI
Subjt:  MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein4.9e-2767.61Show/hide
Query:  VPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI
        +PIC++CGT  NPCRC++VGP+LG +A V   +VEWPVGALVY+F+H KGRRIMGHP T VYP VS +IPI
Subjt:  VPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGAGACTCGGCGTTCCGATCTGCATCGAGTGTGGAACCCATAGGAACCCGTGCAGGTGCAGGTTGGTTGGGCCGAGCCTGGGGTTCTTAGCCTTGGTTGTGAC
GGCGGTGGTGGAGTGGCCCGTCGGAGCTCTGGTTTACTTATTCCGCCACCACAAAGGCCGCCGTATCATGGGTCATCCGGTCACCGTTGTTTACCCTTCCGTGTCTAATG
CGATTCCTATTTGA
mRNA sequenceShow/hide mRNA sequence
AATTCCTTAACTTTAATCTATCATACGTTTCCTCTCACAATCCCTGAATTCCTTCTCTCCCTATTTTCCCTCAATACTCCGCTGTGCTCCGGAGAAATGGGTGTGAGACT
CGGCGTTCCGATCTGCATCGAGTGTGGAACCCATAGGAACCCGTGCAGGTGCAGGTTGGTTGGGCCGAGCCTGGGGTTCTTAGCCTTGGTTGTGACGGCGGTGGTGGAGT
GGCCCGTCGGAGCTCTGGTTTACTTATTCCGCCACCACAAAGGCCGCCGTATCATGGGTCATCCGGTCACCGTTGTTTACCCTTCCGTGTCTAATGCGATTCCTATTTGA
GAAACTTTTTGTTATTTTCTTTTCTTTTAGTATAAATGGGACAAGCTCAAGAAGCTTTGTGATCATAAATTCTGGTCCTGTCTTTTTTCTTACATAAATAAATAAAGTTA
AATTCAGTTAATTTTAGATAAAGTAAAAACGTTGGGAATTATACAATTAATTGTTGTTAGGATATGATGTTAAAATGGTACTTTCAAATGGAATCATAATGTTTAATGTT
GGGGATTGATTCTTGTTCATATGTATAATAAATGTTATGTAAAAGAAATGATCAACACAAATTATTTAAGCAAAGAAAGCACGCCCCCAACAAAACATAGCAACATTATT
GAGAAGATAACATCTTGATATTAAGTCTGCAGTTTCGATTACGGGA
Protein sequenceShow/hide protein sequence
MGVRLGVPICIECGTHRNPCRCRLVGPSLGFLALVVTAVVEWPVGALVYLFRHHKGRRIMGHPVTVVYPSVSNAIPI