| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040427.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.9e-130 | 60.35 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
TSKR+FFASYTP DFGSVR+ NDG N VGI DVHLKNRN SRLILKNVKHIPDI MNLIS L + FCNTFDNGIWKLTKGSMVIA GQK SSLYYM
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
DAKI++ +INTV+DEANVEL HKRLS+M KQTRVTFKSSQ+SRK N+LEL
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
Query: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
TLKTKDQV FKQFHA VERET EKLKC+RT NG A+RLNRTLVERVRCLL+E Q
Subjt: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
Query: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
L QSFW EALNTV+HVLNLT CVPL EVPNRIWSG DISYSHLRVF CKAFVHVPK+ERSKLDAKTK CVFLGYGQDEFGYR+Y VKKKLIRSRDVVF
Subjt: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
Query: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
VEDQTIADIEKIDEP+ KH + + + + ++DE+++ HT+E
Subjt: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
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| KAA0047570.1 putative retrotransposon [Cucumis melo var. makuwa] | 1.0e-151 | 65.34 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
TSK +FFASYTPSDFGSVR+ NDGSAN VGI DVHL NRN SRLILKNVKHI DIRMNLIS L + FCNTFDNGIWKLTKGS+VIA+G K SSLYYM
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR-----------------------------------------KQTRVTFKSSQYSRKPNILEL---------
DAKI++S+INTV+DE N+EL HKRLS+M KQTRVTFKSSQ+SRKPN+LEL
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR-----------------------------------------KQTRVTFKSSQYSRKPNILEL---------
Query: -------------------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLV
TLKTKDQVLQ FKQFHA VERET EKLKC+RT NG AERLNRTLV
Subjt: -------------------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLV
Query: ERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVK
ERVRCLLSE QL QSFW EALNTVVHVLNLT CVPL EVPNRIWSG DISYSHLRVF CKAFVHVPK+ERSKLDAKTK CVFLGYGQDEFGYRLYDPVK
Subjt: ERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVK
Query: KKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSSTSLTQSSTHIEDEVQNELFFHTYESSEQVGTEDSVQE
KKLIRSRDVVF+EDQTIADIEKIDEP KHSD IDLSSTSLT ST IEDE+QNE FF T ESSEQVG EDSVQE
Subjt: KKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSSTSLTQSSTHIEDEVQNELFFHTYESSEQVGTEDSVQE
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| RVW27439.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 9.1e-116 | 50.74 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
T ++ FF SYT DFGSVR+ NDGSA A+G+ DV L+ N + L LKNVKHIPDIRMNLIS L + FCNTF + WKLT+GSMVIAKG K SSLY M
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
A++++S+IN VDD++ EL H +L +M KQTRV FK+ ++RKP+ I TLKTKDQVL FKQF
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
Query: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
HA VER++ EKLKC+RT NG AER+NRTLVERVRCLLS+ QL +SFW EALNT+VHVLNLT CVPLE +V
Subjt: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
Query: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
P+RIWS +ISY HLRVF CKAFVH+PK+ERSKLDAKT+ CVF+GYGQDE GY+ YD V+KKL+RSRDVVF+ED TI DIEK + E +HS +LIDL
Subjt: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
Query: SLTQSSTHIEDEVQNELF---------------------FHTYESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
LT T +EDE ++ E+ QV +D V EQ P+D+ L+RS
Subjt: SLTQSSTHIEDEVQNELF---------------------FHTYESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
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| RVW74036.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.0e-115 | 50.95 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
T ++ FF SYT DFGSVR+ NDGSA A+G+ DV L+ N + L LKNVKHIPDIRMNLIS L + FCNTF + WKLT+GSMVIAKG K SSLY M
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
A++++S+IN VDD++ EL H +L +M KQTRV FK+ ++RKP+ I TLKTKDQVL FKQF
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
Query: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
HA VER++ EKLKC+RT NG AER+NRTLVERVRCLLS+ QL +SFW EALNT+VHVLNLT CVPLE +V
Subjt: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
Query: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
P+RIWS +ISY HLRVF CKAFVH+PK+ERSKLDAKT+ CVF+GYGQDE GY+ YD V+KKL+RSRDVVF+ED TI DIEK + E +HS +LIDL
Subjt: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
Query: SLTQSSTHIED----------------EVQNELFFHTY-----ESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
LT T +ED +V++E + E+ QV +D V EQ P+D+ L+RS
Subjt: SLTQSSTHIED----------------EVQNELFFHTY-----ESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
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| TYJ98688.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.5e-131 | 60.57 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
TSKR+FFASYTP DFGSVR+ NDG N VGI DVHLKNRN SRLILKNVKHIPDI MNLIS L + FCNTFDNGIWKLTKGSMVIA GQK SSLYYM
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
DAKI++ +INTV+DEANVEL HKRLS+M KQTRVTFKSSQ+SRK N+LEL
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
Query: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
TLKTKDQV FKQFHA VERET EKLKC+RT NG A+RLNRTLVERVRCLL+E Q
Subjt: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
Query: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
L QSFW EALNTV+HVLNLT CVPL EVPNRIWSG DISYSHLRVF CKAFVHVPK+ERSKLDAKTK CVFLGYGQDEFGYR+YD VKKKLIRSRDVVF
Subjt: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
Query: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
VEDQTIADIEKIDEP+ KH + + + + ++DE+++ HT+E
Subjt: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CW59 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.4e-116 | 50.74 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
T ++ FF SYT DFGSVR+ NDGSA A+G+ DV L+ N + L LKNVKHIPDIRMNLIS L + FCNTF + WKLT+GSMVIAKG K SSLY M
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
A++++S+IN VDD++ EL H +L +M KQTRV FK+ ++RKP+ I TLKTKDQVL FKQF
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
Query: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
HA VER++ EKLKC+RT NG AER+NRTLVERVRCLLS+ QL +SFW EALNT+VHVLNLT CVPLE +V
Subjt: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
Query: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
P+RIWS +ISY HLRVF CKAFVH+PK+ERSKLDAKT+ CVF+GYGQDE GY+ YD V+KKL+RSRDVVF+ED TI DIEK + E +HS +LIDL
Subjt: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
Query: SLTQSSTHIEDEVQNELF---------------------FHTYESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
LT T +EDE ++ E+ QV +D V EQ P+D+ L+RS
Subjt: SLTQSSTHIEDEVQNELF---------------------FHTYESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
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| A0A438GP95 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.8e-116 | 50.95 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
T ++ FF SYT DFGSVR+ NDGSA A+G+ DV L+ N + L LKNVKHIPDIRMNLIS L + FCNTF + WKLT+GSMVIAKG K SSLY M
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
A++++S+IN VDD++ EL H +L +M KQTRV FK+ ++RKP+ I TLKTKDQVL FKQF
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPN-----ILELTLKTKDQVLQAFKQF
Query: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
HA VER++ EKLKC+RT NG AER+NRTLVERVRCLLS+ QL +SFW EALNT+VHVLNLT CVPLE +V
Subjt: HAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEV
Query: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
P+RIWS +ISY HLRVF CKAFVH+PK+ERSKLDAKT+ CVF+GYGQDE GY+ YD V+KKL+RSRDVVF+ED TI DIEK + E +HS +LIDL
Subjt: PNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSST
Query: SLTQSSTHIED----------------EVQNELFFHTY-----ESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
LT T +ED +V++E + E+ QV +D V EQ P+D+ L+RS
Subjt: SLTQSSTHIED----------------EVQNELFFHTY-----ESSEQVGTEDSVQEQLAKTVVPTDVSLKRS
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| A0A5A7TFU1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-130 | 60.35 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
TSKR+FFASYTP DFGSVR+ NDG N VGI DVHLKNRN SRLILKNVKHIPDI MNLIS L + FCNTFDNGIWKLTKGSMVIA GQK SSLYYM
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
DAKI++ +INTV+DEANVEL HKRLS+M KQTRVTFKSSQ+SRK N+LEL
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
Query: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
TLKTKDQV FKQFHA VERET EKLKC+RT NG A+RLNRTLVERVRCLL+E Q
Subjt: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
Query: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
L QSFW EALNTV+HVLNLT CVPL EVPNRIWSG DISYSHLRVF CKAFVHVPK+ERSKLDAKTK CVFLGYGQDEFGYR+Y VKKKLIRSRDVVF
Subjt: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
Query: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
VEDQTIADIEKIDEP+ KH + + + + ++DE+++ HT+E
Subjt: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
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| A0A5D3BKF7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-131 | 60.57 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
TSKR+FFASYTP DFGSVR+ NDG N VGI DVHLKNRN SRLILKNVKHIPDI MNLIS L + FCNTFDNGIWKLTKGSMVIA GQK SSLYYM
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
DAKI++ +INTV+DEANVEL HKRLS+M KQTRVTFKSSQ+SRK N+LEL
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILEL--------------------
Query: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
TLKTKDQV FKQFHA VERET EKLKC+RT NG A+RLNRTLVERVRCLL+E Q
Subjt: --------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLVERVRCLLSELQ
Query: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
L QSFW EALNTV+HVLNLT CVPL EVPNRIWSG DISYSHLRVF CKAFVHVPK+ERSKLDAKTK CVFLGYGQDEFGYR+YD VKKKLIRSRDVVF
Subjt: LSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVVF
Query: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
VEDQTIADIEKIDEP+ KH + + + + ++DE+++ HT+E
Subjt: VEDQTIADIEKIDEPEYKHSDNLID--LSSTSLTQSSTHIEDEVQNELFFHTYE
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| A0A5D3CVK2 Putative retrotransposon | 5.0e-152 | 65.34 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
TSK +FFASYTPSDFGSVR+ NDGSAN VGI DVHL NRN SRLILKNVKHI DIRMNLIS L + FCNTFDNGIWKLTKGS+VIA+G K SSLYYM
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR-----------------------------------------KQTRVTFKSSQYSRKPNILEL---------
DAKI++S+INTV+DE N+EL HKRLS+M KQTRVTFKSSQ+SRKPN+LEL
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR-----------------------------------------KQTRVTFKSSQYSRKPNILEL---------
Query: -------------------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLV
TLKTKDQVLQ FKQFHA VERET EKLKC+RT NG AERLNRTLV
Subjt: -------------------------TLKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG-------------------------------AERLNRTLV
Query: ERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVK
ERVRCLLSE QL QSFW EALNTVVHVLNLT CVPL EVPNRIWSG DISYSHLRVF CKAFVHVPK+ERSKLDAKTK CVFLGYGQDEFGYRLYDPVK
Subjt: ERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVK
Query: KKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSSTSLTQSSTHIEDEVQNELFFHTYESSEQVGTEDSVQE
KKLIRSRDVVF+EDQTIADIEKIDEP KHSD IDLSSTSLT ST IEDE+QNE FF T ESSEQVG EDSVQE
Subjt: KKLIRSRDVVFVEDQTIADIEKIDEPEYKHSDNLIDLSSTSLTQSSTHIEDEVQNELFFHTYESSEQVGTEDSVQE
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.4e-13 | 32.43 | Show/hide |
Query: AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPL--ELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQD
+ER+ RT+ E+ R ++S +L +SFW EA+ T +++N L + P +W HLRVF +VH+ KN++ K D K+ +F+GY +
Subjt: AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPL--ELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQD
Query: EFGYRLYDPVKKKLIRSRDVVFVEDQTI----ADIEKIDEPEYKHSDN
G++L+D V +K I +RDVV E + E + + K S+N
Subjt: EFGYRLYDPVKKKLIRSRDVVFVEDQTI----ADIEKIDEPEYKHSDN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-72 | 37 | Show/hide |
Query: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
T R F Y DFG+V++ N + GI D+ +K L+LK+V+H+PD+RMNLIS ++L + + F N W+LTKGS+VIAKG +LY
Subjt: TSKRKFFASYTPSDFGSVRVSNDGSANAVGIEDVHLKNRNSSRLILKNVKHIPDIRMNLISQVSLMTKVFCNTFDNGIWKLTKGSMVIAKGQKISSLYYM
Query: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILELT-------------------
+A+I +N DE +V+L HKR+ +M KQ RV+F++S RK NIL+L
Subjt: DAKIMNSNINTVDDEANVELSHKRLSYMR------------------------------KQTRVTFKSSQYSRKPNILELT-------------------
Query: ---------------LKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG--------------------------------AERLNRTLVERVRCLLSEL
LKTKDQV Q F++FHA VERET KLK +R+ NG AER+NRT+VE+VR +L
Subjt: ---------------LKTKDQVLQAFKQFHAFVERETSEKLKCVRTYNG--------------------------------AERLNRTLVERVRCLLSEL
Query: QLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVV
+L +SFW EA+ T +++N + VPL E+P R+W+ ++SYSHL+VF C+AF HVPK +R+KLD K+ C+F+GYG +EFGYRL+DPVKKK+IRSRDVV
Subjt: QLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYGQDEFGYRLYDPVKKKLIRSRDVV
Query: FVEDQTIADIEKIDEPEYKHSDNLIDLSSTSLTQSSTH-IEDEVQNELFFHTYESSEQVGTEDSVQEQLAKTV
F E + + ++ + N + + STS +S DEV E EQ G EQL + V
Subjt: FVEDQTIADIEKIDEPEYKHSDNLIDLSSTSLTQSSTH-IEDEVQNELFFHTYESSEQVGTEDSVQEQLAKTV
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 3.5e-09 | 35.29 | Show/hide |
Query: LNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTK
+NRT++E+VR +L E L ++F +A NT VH++N + VP+ +W + +YS+LR F C A++H + KL + K
Subjt: LNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.8e-11 | 33.86 | Show/hide |
Query: YNG-AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYG
+NG +ER +R +VE LLS + +++W A V+++N L+LE P + GT +Y LRVF C + + + KLD K++ CVFLGY
Subjt: YNG-AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYG
Query: QDEFGYRLYDPVKKKLIRSRDVVFVED
+ Y +L SR V F E+
Subjt: QDEFGYRLYDPVKKKLIRSRDVVFVED
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-09 | 30.95 | Show/hide |
Query: YNG-AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYG
+NG +ER +R +VE LLS + +++W A + V+++N L+L+ P + G +Y L+VF C + + R KL+ K+K C F+GY
Subjt: YNG-AERLNRTLVERVRCLLSELQLSQSFWDEALNTVVHVLNLTSCVPLELEVPNRIWSGTDISYSHLRVFVCKAFVHVPKNERSKLDAKTKACVFLGYG
Query: QDEFGYRLYDPVKKKLIRSRDVVFVE
+ Y +L SR V F E
Subjt: QDEFGYRLYDPVKKKLIRSRDVVFVE
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