CuGenDBv2

Gene ID	CSPI03G22030
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Kinetochore protein NDC80-like protein
Genome location	Chr3:18466670..18468979
RNA-Seq Expression	CSPI03G22030
Synteny	CSPI03G22030
Gene Ontology terms	GO:0051301 - cell division (biological process) GO:0051315 - attachment of mitotic spindle microtubules to kinetochore (biological process) GO:0031262 - Ndc80 complex (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149971.2 kinetochore protein NDC80 homolog isoform X1 [Cucumis sativus]

5.1e-82

94.89

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYKTT+KPALDSFAEDIRRSSMMKLEELISLRQQS+ENTAKIESKR H+ASLQ H+NEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA
        VEGEAEESLKNAKLAHQEAIKQ EEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMPA
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA

XP_008439248.1 PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo]

1.5e-78

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYK+T+KPALDSFAEDIRRSSMMKLEELISLRQQS+ENTAKI+SKR+ +ASLQ HINEHET+LISLKDEMRDYILRCSTESKKMVED QQEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP
        VEGEAEESLKNAKLA+QEA KQEEEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMP
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP

XP_011651418.2 kinetochore protein NDC80 homolog [Cucumis sativus]

4.1e-87

100

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPAV
        VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPAV
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPAV

XP_031739032.1 kinetochore protein NDC80 homolog isoform X2 [Cucumis sativus]

5.1e-82

94.89

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYKTT+KPALDSFAEDIRRSSMMKLEELISLRQQS+ENTAKIESKR H+ASLQ H+NEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA
        VEGEAEESLKNAKLAHQEAIKQ EEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMPA
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA

XP_038886841.1 LOW QUALITY PROTEIN: kinetochore protein NDC80 homolog [Benincasa hispida]

5.0e-69

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYKTT+KPALDSFAEDIRRSSM KLEELISLRQQS+ENTAKIESKR H+ASLQ HINE ETQLISLK+E+RDY LRCSTESKKMVEDVQQEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP
        VE EA ESLKNAKLAHQEAIKQ EEEI +CAREL+SC+DS+S++KA V  KI DM+ CLS AAAGISEAFK SMP
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYB0 kinetochore protein NDC80 homolog

7.5e-79

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYK+T+KPALDSFAEDIRRSSMMKLEELISLRQQS+ENTAKI+SKR+ +ASLQ HINEHET+LISLKDEMRDYILRCSTESKKMVED QQEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP
        VEGEAEESLKNAKLA+QEA KQEEEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMP
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP

A0A5D3DHD6 Kinetochore protein NDC80-like protein

7.5e-79

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYK+T+KPALDSFAEDIRRSSMMKLEELISLRQQS+ENTAKI+SKR+ +ASLQ HINEHET+LISLKDEMRDYILRCSTESKKMVED QQEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP
        VEGEAEESLKNAKLA+QEA KQEEEEIHMCARELLSCLDS+SQYKAVVSCKISDMESCLSKAAAGISEAFK SMP
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMP

A0A6J1D5D4 kinetochore protein NDC80 homolog

6.2e-57

70.45

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MGIDYK+T+KPALDS A+DI++SSM KLE+LISLRQQS+ENTAK+ES+R ++ASLQ HI+E ETQ+ SL++E +DY LRCSTE+KKMVEDV+QEAHNLDL
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA
        +E EA E LKNAKL HQEA+KQ EEEI +CARELL+ +DS+S+Y+  V  KISDM+S LSK A GISEA+K S+PA
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA

A0A6J1E5Y9 kinetochore protein NDC80 homolog

3.0e-59

72.16

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MG+DYKTTIKP+LDSFAEDI++SSM KLE+LISLRQQS+EN+AKIES+RSH+ SLQ HI E ETQ+ SL++E+RDY LRCSTESKKMVED+Q EAH++D+
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA
        VE EA E LKNAK+ H+EAIKQ EEEI +CAREL++C+DS+SQYK  V  KISDM S LSK A GISEA+K S+PA
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA

A0A6J1JAC2 kinetochore protein NDC80 homolog

4.1e-61

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MG+DYKTTIKPALDSFAEDI++SSM KLE+LISLRQQS+ENTAKIES+RSH+ SLQ HI E ETQ+ SLK+E+RDY LRCSTESKKMVEDVQ EAH++D+
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA
        VE EA E LKNAKL H+EAIKQ EEEI +CAREL++C+DS+SQYK  V  KISDM S LSK A GISEA+K S+PA
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPA

SwissProt top hits

e value

%identity

Alignment

Q9M1G5 Kinetochore protein NDC80 homolog

2.3e-29

41.52

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MG+DYK+ +KPAL S  + I+ SS  K+EEL++L+   +E  +KIESKRS + S+Q  IN+ E ++  +K E ++   +C  E+K +VE V+ EA NL++
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFK
        VE EA E +K ++L  QEA+K+ EEE+  CA +L + +DS+S+ K  +  KIS++++ ++  A+ +SE +K
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFK

Arabidopsis top hits

e value

%identity

Alignment

AT3G54630.1 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink).

1.7e-30

41.52

Show/hide

Query:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL
        MG+DYK+ +KPAL S  + I+ SS  K+EEL++L+   +E  +KIESKRS + S+Q  IN+ E ++  +K E ++   +C  E+K +VE V+ EA NL++
Subjt:  MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDL

Query:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFK
        VE EA E +K ++L  QEA+K+ EEE+  CA +L + +DS+S+ K  +  KIS++++ ++  A+ +SE +K
Subjt:  VEGEAEESLKNAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGATTGACTATAAGACAACCATTAAGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCCATGATGAAGTTGGAAGAGTTGATTTCTCTCCGGCAGCA
ATCAAATGAAAATACTGCTAAAATTGAGTCTAAACGCAGTCACATGGCTTCTCTTCAACCCCATATCAATGAACATGAAACACAACTAATCTCCTTAAAAGATGAAATGA
GAGATTATATTTTAAGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAG
AATGCCAAATTGGCGCATCAGGAAGCAATAAAGCAAGAAGAAGAAGAAATTCATATGTGTGCTCGTGAACTACTTTCATGTCTTGACTCTCTCTCACAATATAAAGCAGT
TGTTAGCTGCAAAATTTCAGATATGGAAAGCTGCCTCTCGAAGGCTGCTGCCGGTATCTCTGAGGCTTTCAAGATTTCTATGCCTGCAGTATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGIDYKTTIKPALDSFAEDIRRSSMMKLEELISLRQQSNENTAKIESKRSHMASLQPHINEHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLK
NAKLAHQEAIKQEEEEIHMCARELLSCLDSLSQYKAVVSCKISDMESCLSKAAAGISEAFKISMPAV

CSPI03G22030 (gene) of Cucumber (PI 183967) v1 genome