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CSPI03G22050 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G22050
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionArabinogalactan peptide 22
Genome locationChr3:18474391..18475680
RNA-Seq ExpressionCSPI03G22050
SyntenyCSPI03G22050
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57863.1 hypothetical protein Csa_009896 [Cucumis sativus]3.9e-25100Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

TYK03143.1 arabinogalactan peptide 22 [Cucumis melo var. makuwa]3.8e-2088.57Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

XP_008465391.1 PREDICTED: arabinogalactan peptide 22 [Cucumis melo]3.2e-1987.14Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

XP_022968217.1 arabinogalactan peptide 22-like isoform X2 [Cucurbita maxima]1.8e-1475.71Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MA LRA CFG+Y A++IA+FYVV LP+S A+  +SSPAPAPAPTSDGTAIDQGIAY+LML+AL LTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

XP_038898060.1 arabinogalactan protein 41-like [Benincasa hispida]1.1e-1681.43Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVL+A CFGIYAA++IAVFYVV LP+S+A+ SSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

TrEMBL top hitse value%identityAlignment
A0A0A0L7T5 Uncharacterized protein1.9e-25100Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A1S3CNS5 arabinogalactan peptide 221.6e-1987.14Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A5A7U3P4 Arabinogalactan peptide 221.6e-1987.14Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A5D3BTZ5 Arabinogalactan peptide 221.8e-2088.57Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

A0A6J1HT15 arabinogalactan peptide 22-like isoform X28.8e-1575.71Show/hide
Query:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        MA LRA CFG+Y A++IA+FYVV LP+S A+  +SSPAPAPAPTSDGTAIDQGIAY+LML+AL LTYIIH
Subjt:  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 167.0e-0965.45Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        L +  + V L L+ AQ    S APAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Q8L9T8 Arabinogalactan protein 417.5e-1161.29Show/hide
Query:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ AQ    S APAPAPTSDGT IDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Q9FK16 Arabinogalactan protein 225.3e-0963.64Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        ++AVF ++++ L     S SS +PAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Q9M373 Arabinogalactan protein 202.7e-0856.92Show/hide
Query:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + V  P + AQ    S APAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 165.0e-1065.45Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        L +  + V L L+ AQ    S APAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

AT3G61640.1 arabinogalactan protein 201.9e-0956.92Show/hide
Query:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + V  P + AQ    S APAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

AT5G24105.1 arabinogalactan protein 415.3e-1261.29Show/hide
Query:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ AQ    S APAPAPTSDGT IDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH

AT5G53250.1 arabinogalactan protein 223.8e-1063.64Show/hide
Query:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH
        ++AVF ++++ L     S SS +PAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCC
AGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGA
mRNA sequenceShow/hide mRNA sequence
AGAAGCCAAAAATAGTGAAGAAACTTTGCCAGCAAAGGATTGAGTTCCAGCACAATCAACTTAACAGTCTGTCTATCCAGCACAGCAAAAGCATAAAAAATAAGGAATCT
TTACAAAGAGAGAATGCAAAATCACATGGGTTTGCTTGGATTCCCAAAGCTTACAGTTCAAACATAAACAGTATTAAATCCCCAATTCCTCCATTTCCATTCTTCTCATT
CATAATCTTCAAATTTCTTCTTCTTCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTA
TTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGA
ATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGAAAAAACAGAAGAACAATTACTATGAATTTCATTATTTTCAAGTCTGTGAGAGATGA
AAGGAAAGAGGGTGTGGGGTTGTGTTATTCTATATATTTGCCATTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTGAAGCTTGGCAAAGGTTTCATTTGTAGAA
AGTGATCTGTTGTATTTTGTATTATAATTTATTTATATATTTTTCATTCTTTT
Protein sequenceShow/hide protein sequence
MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH