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CSPI03G22110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G22110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationChr3:18516420..18517197
RNA-Seq ExpressionCSPI03G22110
SyntenyCSPI03G22110
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591621.1 Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia]8.0e-0668.18Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN  G GSTQ Q+ DS++KTP+QNGSSGY T SS + S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]8.0e-0668.18Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN  G GSTQ Q+ DS++KTP+QNGSSGY T SS + S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
XP_004136317.1 replication protein A 32 kDa subunit A [Cucumis sativus]4.5e-0979.55Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN KG+GSTQLQT DS++KTP+QNGS+GYHTTSS I S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
XP_008466326.1 PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo]5.4e-1084.09Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN KGDGSTQLQT DS++KTP+QNGSSGYHTTSS I S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]8.0e-0668.18Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN  G GSTQ Q+ DS++KTP+QNGSSGY T SS + S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
TrEMBL top hitse value%identityAlignment
A0A0A0L7B3 Uncharacterized protein3.3e-37100Show/hide
Query:  MSRRRFHGGNVEVVTGLLQTLMKLHSTLLNAYTCCLRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVSVN
        MSRRRFHGGNVEVVTGLLQTLMKLHSTLLNAYTCCLRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVSVN
Subjt:  MSRRRFHGGNVEVVTGLLQTLMKLHSTLLNAYTCCLRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVSVN
A0A0A0LEG7 Uncharacterized protein2.2e-0979.55Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN KG+GSTQLQT DS++KTP+QNGS+GYHTTSS I S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
A0A1S3CR64 replication protein A 32 kDa subunit A-like2.6e-1084.09Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN KGDGSTQLQT DS++KTP+QNGSSGYHTTSS I S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
A0A6J1F8S8 replication protein A 32 kDa subunit A-like3.9e-0668.18Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
        LRNSKLQN  G GSTQ Q+ DS++KTP+QNGSSGY T SS + S
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVS
A0A6J1IMU1 replication protein A 32 kDa subunit A-like6.6e-0669.77Show/hide
Query:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIV
        LRNSKLQN  G GSTQ Q+ DS++KTP+QNGSSGY T SS  V
Subjt:  LRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGAAGAAGATTCCACGGTGGCAACGTCGAAGTTGTGACAGGCTTGTTACAAACTTTGATGAAATTACATTCCACTTTATTGAATGCATACACATGCTGCTTGCG
GAATTCCAAGTTACAGAATCCCAAAGGCGATGGATCAACACAACTCCAAACTCCAGATTCACTTATGAAGACTCCATTGCAGAATGGCTCGAGTGGATATCATACAACAT
CTTCAACAATAGTAAGTGTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGAAGAAGATTCCACGGTGGCAACGTCGAAGTTGTGACAGGCTTGTTACAAACTTTGATGAAATTACATTCCACTTTATTGAATGCATACACATGCTGCTTGCG
GAATTCCAAGTTACAGAATCCCAAAGGCGATGGATCAACACAACTCCAAACTCCAGATTCACTTATGAAGACTCCATTGCAGAATGGCTCGAGTGGATATCATACAACAT
CTTCAACAATAGTAAGTGTTAATTAA
Protein sequenceShow/hide protein sequence
MSRRRFHGGNVEVVTGLLQTLMKLHSTLLNAYTCCLRNSKLQNPKGDGSTQLQTPDSLMKTPLQNGSSGYHTTSSTIVSVN