; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G22280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G22280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionATP-dependent DNA helicase
Genome locationChr3:18725924..18728851
RNA-Seq ExpressionCSPI03G22280
SyntenyCSPI03G22280
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR010285 - DNA helicase Pif1-like
IPR025476 - Helitron helicase-like domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AQK54472.1 hypothetical protein ZEAMMB73_Zm00001d051540 [Zea mays]3.7e-9743.31Show/hide
Query:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS
        YIK+E++RLDF +  Q ++R++LY+G+VD ++ GE R DK+GKR VL ++FIGGP++MRHRY+DAMALV+ +GKPD+F+TMTCN  W EI  EL+  Q  
Subjt:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS

Query:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASI-MPGGRTTHSRFNIPLETHESSICNI
         D PDL  R+   KL +LK ++  + I G                            +KY   C+    +  S  +P  +     + +           +
Subjt:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASI-MPGGRTTHSRFNIPLETHESSICNI

Query:  SKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMD-NPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQS
         K    +++ K+A +IIWDE  M K+  I+A+D + RDIM  + LPFGGK VV RGDFRQVLPVV + +R Q +  SL  SYLW  M  ++L +NMRAQS
Subjt:  SKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMD-NPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQS

Query:  DTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAI
        D  FAEYLL++G+ T+ S  D  + LP  + V     +  + +L++ +YP+L  + ++  Y+T+RAILST N++VD IN RMI+ F G+   + SFD A+
Subjt:  DTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAI

Query:  DDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP
        DD +NYY  EFLN+L PN +PPH L LK  CP++LLRN+DP
Subjt:  DDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP

KAG5560632.1 hypothetical protein RHGRI_003828 [Rhododendron griersonianum]2.4e-9630.98Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQ
        MYIKLE TRLD+++ +QS IR+ELYQGIVD V  GE+RG  VGK++VLP++F+GGP++MR RYLDA++LVQ +GKPDLFITMTCN +WKEI++ L +GQ 
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQ

Query:  SHDRPDLTSRVSRGKLMDLKDQIVHKEIFGNV--------------------------------------------------------------------
        + DRPDLT+RV R KL DLK Q+  K IFG V                                                                    
Subjt:  SHDRPDLTSRVSRGKLMDLKDQIVHKEIFGNV--------------------------------------------------------------------

Query:  -----------------------------DNLEKLQHSR-------------------------------------------------------------
                                     D +++ Q +R                                                             
Subjt:  -----------------------------DNLEKLQHSR-------------------------------------------------------------

Query:  ------------------------NRE-------------------------------------------------------------------NIFVSC
                                NR                                                                     + V C
Subjt:  ------------------------NRE-------------------------------------------------------------------NIFVSC

Query:  -------------------------------------FVSYY------KIKKYDC---------------------------------------------
                                              V Y+       IK YD                                              
Subjt:  -------------------------------------FVSYY------KIKKYDC---------------------------------------------

Query:  -----NCNNNIS--------------------------------------VAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDE
               ++N++                                      VAASIMPGGRT+HSRF IP++ +ESS+CNI KQS   EL++ AK+IIWDE
Subjt:  -----NCNNNIS--------------------------------------VAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDE

Query:  VPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTED
         PMAK+  I+A+DR+ RDIM N + FGGK++V  GDFRQVLPVVPR TR +T+N SLV SYLW KM+K++L+KNMRAQ D+ F+++LL++GN  E +  +
Subjt:  VPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTED

Query:  DYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVP
        D I +P  ++    + +    +L+N ++P L+ +  S EY+T RAIL+T NE VD +N+++I  FPGK  ++ SFDEAIDDTHNYY EEFLN+L+PNG+P
Subjt:  DYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVP

Query:  PHKLFLKKDCPVILLRNLDP
        PH+L LK + P++LLRNL+P
Subjt:  PHKLFLKKDCPVILLRNLDP

KYP55257.1 hypothetical protein KK1_001464 [Cajanus cajan]1.3e-9741.59Show/hide
Query:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS
        Y+K+E  RL + +  Q+ IR+E+YQG+ D ++ GET  + +G+R +LPS+FIG  +++  RY D MA+V + GKPD+F+TMTCN  W EI  +L   Q  
Subjt:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS

Query:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASIMPGGRTTHSRFNIPLETHESSICNIS
         DR DL +R+ R K   LK+ +++K + G V            +       ++  + K        +  +AA+++PGGRT HSRF IP+     S C+IS
Subjt:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASIMPGGRTTHSRFNIPLETHESSICNIS

Query:  KQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDT
        KQS+  +LI++   IIWDE PM  +  ++A+DR+ +D++D   PFGGK+++L GDFRQVLPVVP+ T+ Q I   +VKS+LW   + + L +NMR+  D 
Subjt:  KQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDT

Query:  RFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDD
         FAEYL++IG+  E +  DD + +P  I +T    E SI KL+   +P L++HT +A YM  +AIL+  NE V ++N+ +I  F G+    +SFDE   D
Subjt:  RFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDD

Query:  THNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPR
        THN Y +E+L+S+ P G PPH L +KK   ++LLRN+DP+
Subjt:  THNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPR

XP_022155233.1 ATP-dependent DNA helicase PIF1-like [Momordica charantia]2.2e-11073.33Show/hide
Query:  VAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQ
        VAA IMPGGRT HSRFNIPL+ +ESS+CNISKQSN+ EL++QAK+IIWDE P AKK  I+AVDRTF+DIM+N  PFGGK++V  GDFRQVLPVVPRATRQ
Subjt:  VAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQ

Query:  QTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTT
        QT++ESLVKSYLW +MEK+QL KNMRAQ+D +FAEYLLKIGN TE S  +DY+ LP +I +     EDS+LKLLNIVYPDL  +  SAEY+TNRAILSTT
Subjt:  QTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTT

Query:  NEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP
        NEYVD+IN +MI +F G +EEFMSFDE IDDTH+YY EEFLNSLLPNG+PPHKL LK +CP+ILLRNLDP
Subjt:  NEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP

XP_031737538.1 uncharacterized protein LOC116402430 [Cucumis sativus]5.2e-123100Show/hide
Query:  MAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDY
        MAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDY
Subjt:  MAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDY

Query:  ICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPH
        ICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPH
Subjt:  ICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPH

Query:  KLFLKKDCPVILLRNLDPRQWSM
        KLFLKKDCPVILLRNLDPRQWSM
Subjt:  KLFLKKDCPVILLRNLDPRQWSM

TrEMBL top hitse value%identityAlignment
A0A151SKD2 ATP-dependent DNA helicase6.2e-9841.59Show/hide
Query:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS
        Y+K+E  RL + +  Q+ IR+E+YQG+ D ++ GET  + +G+R +LPS+FIG  +++  RY D MA+V + GKPD+F+TMTCN  W EI  +L   Q  
Subjt:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS

Query:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASIMPGGRTTHSRFNIPLETHESSICNIS
         DR DL +R+ R K   LK+ +++K + G V            +       ++  + K        +  +AA+++PGGRT HSRF IP+     S C+IS
Subjt:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASIMPGGRTTHSRFNIPLETHESSICNIS

Query:  KQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDT
        KQS+  +LI++   IIWDE PM  +  ++A+DR+ +D++D   PFGGK+++L GDFRQVLPVVP+ T+ Q I   +VKS+LW   + + L +NMR+  D 
Subjt:  KQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDT

Query:  RFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDD
         FAEYL++IG+  E +  DD + +P  I +T    E SI KL+   +P L++HT +A YM  +AIL+  NE V ++N+ +I  F G+    +SFDE   D
Subjt:  RFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDD

Query:  THNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPR
        THN Y +E+L+S+ P G PPH L +KK   ++LLRN+DP+
Subjt:  THNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPR

A0A1D6Q7N5 ATP-dependent DNA helicase1.8e-9743.31Show/hide
Query:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS
        YIK+E++RLDF +  Q ++R++LY+G+VD ++ GE R DK+GKR VL ++FIGGP++MRHRY+DAMALV+ +GKPD+F+TMTCN  W EI  EL+  Q  
Subjt:  YIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQS

Query:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASI-MPGGRTTHSRFNIPLETHESSICNI
         D PDL  R+   KL +LK ++  + I G                            +KY   C+    +  S  +P  +     + +           +
Subjt:  HDRPDLTSRVSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASI-MPGGRTTHSRFNIPLETHESSICNI

Query:  SKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMD-NPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQS
         K    +++ K+A +IIWDE  M K+  I+A+D + RDIM  + LPFGGK VV RGDFRQVLPVV + +R Q +  SL  SYLW  M  ++L +NMRAQS
Subjt:  SKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMD-NPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQS

Query:  DTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAI
        D  FAEYLL++G+ T+ S  D  + LP  + V     +  + +L++ +YP+L  + ++  Y+T+RAILST N++VD IN RMI+ F G+   + SFD A+
Subjt:  DTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAI

Query:  DDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP
        DD +NYY  EFLN+L PN +PPH L LK  CP++LLRN+DP
Subjt:  DDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP

A0A5B7A9C3 ATP-dependent DNA helicase3.6e-9829.84Show/hide
Query:  MYIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQ
        MYIKLETTRLD+Y+ QQS IR++LYQGIVD V AGETRG++VG+R+VLP++F+GGP++MR RYLDA+ALVQ +GKPDLFITMTCN +WKE+++EL EGQ+
Subjt:  MYIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQ

Query:  SHDRPDLTSRVSRGKLMDLKDQIVHKEIFGNV--------------------------------------------------------------------
          DRPDLTSRV R KL DLKDQ+  K IFG V                                                                    
Subjt:  SHDRPDLTSRVSRGKLMDLKDQIVHKEIFGNV--------------------------------------------------------------------

Query:  -------------------------------------DNLEKLQ-----------------------------------------------HSR------
                                             DN EK+                                                H R      
Subjt:  -------------------------------------DNLEKLQ-----------------------------------------------HSR------

Query:  --NRENI-----------FVSC------------------------------FVSYYK------------------------------------------
          + EN+           +VS                               FV+Y++                                          
Subjt:  --NRENI-----------FVSC------------------------------FVSYYK------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------IKKYD-----------------------------------------
                                                              I+ YD                                         
Subjt:  ------------------------------------------------------IKKYD-----------------------------------------

Query:  ----------------------------------CNCNNNI-------------SVAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKV
                                          C    N+              VAA+IMPGGRT HSRF IP+  +E+SICNI KQS   EL+++A++
Subjt:  ----------------------------------CNCNNNI-------------SVAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKV

Query:  IIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTE
        IIWDE PMAK+  I+ +DRT RDIM+N   FGGK++V  GDFRQVLPVVPRATR++T+N SLVKS++W+KMEK+ LT+NMRA++D  F+++LL++GN  E
Subjt:  IIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTE

Query:  LSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLL
         +   D I +P  +++   N+E S  KL++ +YP L+ +  SAEYMT RAIL+T NEYVD++NE++IEMFPG +  F SFDEAIDDTHNYY EEFLNSL 
Subjt:  LSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLL

Query:  PNGVPPHKLFLKKDCPVILLRNLDP
        PNG+PPH+L LK + P++LLRNLDP
Subjt:  PNGVPPHKLFLKKDCPVILLRNLDP

A0A6J1DFU4 ATP-dependent DNA helicase1.4e-9479.36Show/hide
Query:  MAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDY
        MAKK  I+AVDRTFRDIMD+  PFGGK+VV  GDFRQVLPVVPRATRQQTINESLVKSYLW +MEK+QLTKNMRA SD++FAEYLLKIGN TE S EDDY
Subjt:  MAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDY

Query:  ICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPH
        ICL  +I +TG N+E +I+KLLN+VYPDL+ + TS+EYMTNR ILSTTNEYVDQINE+MI++FPGK  EFMSFDEAIDDTHNYY EEFLNSLLPNG+PPH
Subjt:  ICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPH

Query:  KLFLKKDCPVILLRNLDP
        KL LK +CPVILLRNLDP
Subjt:  KLFLKKDCPVILLRNLDP

A0A6J1DMF2 ATP-dependent DNA helicase1.1e-11073.33Show/hide
Query:  VAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQ
        VAA IMPGGRT HSRFNIPL+ +ESS+CNISKQSN+ EL++QAK+IIWDE P AKK  I+AVDRTF+DIM+N  PFGGK++V  GDFRQVLPVVPRATRQ
Subjt:  VAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQ

Query:  QTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTT
        QT++ESLVKSYLW +MEK+QL KNMRAQ+D +FAEYLLKIGN TE S  +DY+ LP +I +     EDS+LKLLNIVYPDL  +  SAEY+TNRAILSTT
Subjt:  QTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTT

Query:  NEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP
        NEYVD+IN +MI +F G +EEFMSFDE IDDTH+YY EEFLNSLLPNG+PPHKL LK +CP+ILLRNLDP
Subjt:  NEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP

SwissProt top hitse value%identityAlignment
A5WFR0 ATP-dependent DNA helicase pif16.3e-0725.1Show/hide
Query:  FVSYYKIKKYDCNCNNNISVAASIMPGGRTTHSRFNIPL--ETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGK
        ++ Y + ++       +  +AA+ M  G T HS   I +  E  E  + N+S++    + +++  V+I DE+ M    ++  V++  + +  N  PFGG 
Subjt:  FVSYYKIKKYDCNCNNNISVAASIMPGGRTTHSRFNIPL--ETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGK

Query:  MVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANII--VTGAN--EEDSILKLLN
         VV+ GDF Q+ PV  R    +     + +++L    +   L++  R QS                   ED  I L  NI+  + G N     +I  L N
Subjt:  MVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANII--VTGAN--EEDSILKLLN

Query:  IVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGK
          Y D+           NR  L T N  V++INE  + +  G+
Subjt:  IVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGK

A6ZM04 ATP-dependent DNA helicase PIF11.3e-0726.59Show/hide
Query:  GGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKV--IIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINE
        GG T HS   I L   ++       + ++  L +   +  ++ DE+ M     +  +D   R I  N  PFGG  ++  GDF Q+ PV     R     +
Subjt:  GGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKV--IIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINE

Query:  SLVKSYLWNKMEK--IQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEY
           +S  W +  K  I L K  R + D +F + L    NR  L   DD              E +   K L+   PD       AE       L +T   
Subjt:  SLVKSYLWNKMEK--IQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEY

Query:  VDQINERMIEMFPGKMEEFMSFD-EAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLD
        V++ N   +   PG++  F + D  A++D      EE    LL N + P +L LK    V++++NLD
Subjt:  VDQINERMIEMFPGKMEEFMSFD-EAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLD

P07271 ATP-dependent DNA helicase PIF11.3e-0726.59Show/hide
Query:  GGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKV--IIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINE
        GG T HS   I L   ++       + ++  L +   +  ++ DE+ M     +  +D   R I  N  PFGG  ++  GDF Q+ PV     R     +
Subjt:  GGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKV--IIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINE

Query:  SLVKSYLWNKMEK--IQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEY
           +S  W +  K  I L K  R + D +F + L    NR  L   DD              E +   K L+   PD       AE       L +T   
Subjt:  SLVKSYLWNKMEK--IQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEY

Query:  VDQINERMIEMFPGKMEEFMSFD-EAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLD
        V++ N   +   PG++  F + D  A++D      EE    LL N + P +L LK    V++++NLD
Subjt:  VDQINERMIEMFPGKMEEFMSFD-EAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLD

P38766 ATP-dependent DNA helicase RRM31.6e-0527.32Show/hide
Query:  ASIMPGGRTTH--SRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQ
        A++  GG T H  S   I  +T +  +  I  Q +     +  KV+I DE+ M     +  +++  R I  N  PFGG  +VL GDF Q+ PV  +   +
Subjt:  ASIMPGGRTTH--SRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQ

Query:  QTINESLVKSYLWNK--MEKIQLTKNMRAQSD--------TRFAEYLLKIGNR-TELSTEDDYI--CLPANIIVTGANEEDSILKLLNIVYPDL
          + +   +S +W +   + I LTK  R Q +         R+ E  + I      L+ + DY     P  +  T    E S +K L  +  DL
Subjt:  QTINESLVKSYLWNK--MEKIQLTKNMRAQSD--------TRFAEYLLKIGNR-TELSTEDDYI--CLPANIIVTGANEEDSILKLLNIVYPDL

Q5AXT5 ATP-dependent DNA helicase PIF13.8e-0425.76Show/hide
Query:  GRTTHSRFNIPL--ETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINES
        G T HS   I L  E     +  I K         + KV++ DEV M        ++   R I +N  PFGG  +V+ GDF Q LP VP    ++     
Subjt:  GRTTHSRFNIPL--ETHESSICNISKQSNKTELIKQAKVIIWDEVPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINES

Query:  LVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYP-DLKTHTTSAEYMTNRAILSTTNEYVD
           S+  +    I LT   R Q D  FA+ L                    N +  G     +I     +  P D      + E    RA        VD
Subjt:  LVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYP-DLKTHTTSAEYMTNRAILSTTNEYVD

Query:  QINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLD
          N   +    G   E M+F+    D+      +F   LL N + P  + LKK   V+L++N++
Subjt:  QINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLD

Arabidopsis top hitse value%identityAlignment
AT3G51690.1 PIF1 helicase8.2e-1033.08Show/hide
Query:  IGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHN--YYH
        I N  +  TE D   +  ++++T    +D I  LL  VY +    + + ++  + AIL   ++ VDQIN+ M+ + PG+ +E +S D      ++  +  
Subjt:  IGNRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHN--YYH

Query:  EEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP
         E LNS+   G+P  KL LK   PV+LLR+LDP
Subjt:  EEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP

AT3G51700.1 PIF1 helicase1.1e-0929.8Show/hide
Query:  DTRFAEYLLKIG--NRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFD-
        D  F +++  IG  N  + +  +  I +  ++++T    +D I  +++ VY +  T + + ++   RAIL  TN+  D+IN+ M+    G+  +    D 
Subjt:  DTRFAEYLLKIG--NRTELSTEDDYICLPANIIVTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFD-

Query:  ----EAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPRQW
             A  +    Y  EFLNS+   G P  KL LK   PV+LLR+L P  W
Subjt:  ----EAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPRQW

AT5G28780.1 PIF1 helicase1.1e-0933.66Show/hide
Query:  YPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMS------FDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPR
        Y        + +Y+T R IL+  NEYVD+IN  M+    G  +E++S       D    D    YH ++LNSL    +P HK+ LKK  P++ +RN + +
Subjt:  YPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMS------FDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPR

Query:  Q
        +
Subjt:  Q


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATAAAGCTTGAAACAACGAGACTTGATTTCTATAAAACACAACAATCACAAATTCGTTCGGAGTTGTATCAAGGGATCGTTGATGTTGTAAATGCAGGAGAAAC
GAGGGGAGACAAGGTTGGAAAACGTGTCGTTCTACCTTCAACTTTTATTGGTGGTCCTAAAAACATGCGACATCGATATTTAGATGCCATGGCCTTAGTACAACATTATG
GGAAGCCAGATCTTTTCATAACAATGACTTGCAATTCTGAATGGAAGGAAATAAGAGAAGAACTTATGGAAGGACAACAATCTCACGATAGACCAGATCTAACTTCAAGA
GTATCTAGAGGAAAGTTAATGGACTTAAAAGACCAAATTGTCCACAAGGAAATATTTGGAAATGTGGACAATTTGGAAAAGTTGCAGCATTCGAGGAACCGGGAAAACAT
TTTTGTATCGTGCTTTGTTAGCTACTATAAGATCAAGAAATATGATTGCAATTGCAACAACAACATCAGCGTTGCTGCTTCAATTATGCCAGGGGGCCGAACAACACATT
CTAGATTTAATATACCATTAGAAACACATGAGTCATCTATATGCAATATTTCTAAGCAAAGTAACAAGACAGAATTGATCAAGCAAGCAAAAGTAATAATTTGGGACGAG
GTGCCAATGGCAAAAAAGGCCAGAATCAAAGCAGTTGACAGAACTTTTAGAGATATAATGGATAATCCATTACCATTCGGTGGAAAAATGGTTGTGTTAAGAGGAGATTT
TCGACAAGTGTTACCTGTTGTCCCACGAGCTACAAGACAACAAACTATTAATGAAAGTTTGGTAAAGTCATACCTTTGGAATAAAATGGAGAAAATCCAACTAACTAAAA
ATATGAGAGCTCAAAGTGATACCCGTTTTGCAGAATATTTGTTGAAGATTGGAAACAGAACTGAACTGTCAACAGAAGATGATTATATTTGTCTCCCTGCCAATATCATT
GTTACAGGTGCAAATGAAGAAGATTCAATATTAAAGTTATTGAATATTGTTTATCCTGATCTCAAAACGCATACTACTTCAGCAGAATACATGACTAATAGAGCAATTCT
ATCGACAACAAATGAGTATGTTGACCAAATCAATGAAAGAATGATTGAGATGTTTCCTGGAAAAATGGAAGAATTCATGAGTTTTGATGAAGCAATTGATGATACACATA
ATTATTATCATGAGGAATTTCTCAACTCATTGTTACCTAATGGTGTTCCTCCACACAAATTGTTTCTTAAAAAAGATTGTCCAGTTATACTATTGAGAAACTTAGACCCC
AGGCAATGGTCTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACATAAAGCTTGAAACAACGAGACTTGATTTCTATAAAACACAACAATCACAAATTCGTTCGGAGTTGTATCAAGGGATCGTTGATGTTGTAAATGCAGGAGAAAC
GAGGGGAGACAAGGTTGGAAAACGTGTCGTTCTACCTTCAACTTTTATTGGTGGTCCTAAAAACATGCGACATCGATATTTAGATGCCATGGCCTTAGTACAACATTATG
GGAAGCCAGATCTTTTCATAACAATGACTTGCAATTCTGAATGGAAGGAAATAAGAGAAGAACTTATGGAAGGACAACAATCTCACGATAGACCAGATCTAACTTCAAGA
GTATCTAGAGGAAAGTTAATGGACTTAAAAGACCAAATTGTCCACAAGGAAATATTTGGAAATGTGGACAATTTGGAAAAGTTGCAGCATTCGAGGAACCGGGAAAACAT
TTTTGTATCGTGCTTTGTTAGCTACTATAAGATCAAGAAATATGATTGCAATTGCAACAACAACATCAGCGTTGCTGCTTCAATTATGCCAGGGGGCCGAACAACACATT
CTAGATTTAATATACCATTAGAAACACATGAGTCATCTATATGCAATATTTCTAAGCAAAGTAACAAGACAGAATTGATCAAGCAAGCAAAAGTAATAATTTGGGACGAG
GTGCCAATGGCAAAAAAGGCCAGAATCAAAGCAGTTGACAGAACTTTTAGAGATATAATGGATAATCCATTACCATTCGGTGGAAAAATGGTTGTGTTAAGAGGAGATTT
TCGACAAGTGTTACCTGTTGTCCCACGAGCTACAAGACAACAAACTATTAATGAAAGTTTGGTAAAGTCATACCTTTGGAATAAAATGGAGAAAATCCAACTAACTAAAA
ATATGAGAGCTCAAAGTGATACCCGTTTTGCAGAATATTTGTTGAAGATTGGAAACAGAACTGAACTGTCAACAGAAGATGATTATATTTGTCTCCCTGCCAATATCATT
GTTACAGGTGCAAATGAAGAAGATTCAATATTAAAGTTATTGAATATTGTTTATCCTGATCTCAAAACGCATACTACTTCAGCAGAATACATGACTAATAGAGCAATTCT
ATCGACAACAAATGAGTATGTTGACCAAATCAATGAAAGAATGATTGAGATGTTTCCTGGAAAAATGGAAGAATTCATGAGTTTTGATGAAGCAATTGATGATACACATA
ATTATTATCATGAGGAATTTCTCAACTCATTGTTACCTAATGGTGTTCCTCCACACAAATTGTTTCTTAAAAAAGATTGTCCAGTTATACTATTGAGAAACTTAGACCCC
AGGCAATGGTCTATGTAA
Protein sequenceShow/hide protein sequence
MYIKLETTRLDFYKTQQSQIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPKNMRHRYLDAMALVQHYGKPDLFITMTCNSEWKEIREELMEGQQSHDRPDLTSR
VSRGKLMDLKDQIVHKEIFGNVDNLEKLQHSRNRENIFVSCFVSYYKIKKYDCNCNNNISVAASIMPGGRTTHSRFNIPLETHESSICNISKQSNKTELIKQAKVIIWDE
VPMAKKARIKAVDRTFRDIMDNPLPFGGKMVVLRGDFRQVLPVVPRATRQQTINESLVKSYLWNKMEKIQLTKNMRAQSDTRFAEYLLKIGNRTELSTEDDYICLPANII
VTGANEEDSILKLLNIVYPDLKTHTTSAEYMTNRAILSTTNEYVDQINERMIEMFPGKMEEFMSFDEAIDDTHNYYHEEFLNSLLPNGVPPHKLFLKKDCPVILLRNLDP
RQWSM