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CSPI03G22670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G22670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr3:19319884..19328628
RNA-Seq ExpressionCSPI03G22670
SyntenyCSPI03G22670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025491.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.6e-2338.59Show/hide
Query:  GIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVPSD
        G R + LADELV +ANTL M P TKGDSSS TK                                                         C  WKDV SD
Subjt:  GIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVPSD

Query:  AISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSEKD
         I TIKARLQ +FVV MSSM +NK +++++  +  +             C  TP            + ETI+K EEV Q+E          +  H S K+
Subjt:  AISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSEKD

Query:  EWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG
         +VAMQEEI K S+DG EPT EAIICE VLG  LGHTKGLG
Subjt:  EWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG

KAA0036865.1 uncharacterized protein E6C27_scaffold20G001750 [Cucumis melo var. makuwa]5.4e-2761.26Show/hide
Query:  NKLREQPIARDDNNELFNLLNDLQGSMREEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVK-VYSLRQRQEASD
        ++LREQ    +D+NELFNLLNDLQG  +E  YDEDG+DF DE+H+NTEQRY  NIFEELM++ RN LYP CTKFSSLNFLVKLMHVK V+ L  +   + 
Subjt:  NKLREQPIARDDNNELFNLLNDLQGSMREEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVK-VYSLRQRQEASD

Query:  DLYSISLGPSN
        ++ S  L P++
Subjt:  DLYSISLGPSN

KAA0055007.1 uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa]4.9e-2065.48Show/hide
Query:  YKTHFSEKDEW----VAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLGWKATPNVAACTSTHVFKKDIGDTYEKLQPR
        ++ H S+   W    VAMQEEIRK S+DG +PT + II E+VL K  GHTKGLGWKATPNVA CTSTHVF+KDIGD YEKLQ +
Subjt:  YKTHFSEKDEW----VAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLGWKATPNVAACTSTHVFKKDIGDTYEKLQPR

TYK00374.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.6e-2438.68Show/hide
Query:  MAGIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVP
        M G R + LADELV +ANTL M P TKGDSSS TK                                                         C  WKDV 
Subjt:  MAGIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVP

Query:  SDAISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSE
        SD I TIKARLQ +FVV MSSM +NK +++++  +  +             C  TP            + ETI+K EEV Q+E          +  H S 
Subjt:  SDAISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSE

Query:  KDEWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG
        K+ +VAMQEEI K S+DG EPT EAIICE VLG  LGHTKGLG
Subjt:  KDEWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG

XP_008455800.1 PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo]3.2e-1967.5Show/hide
Query:  DDNNELFNLLNDLQGSM--REEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVKV
        D+++++ +LL DLQGSM  REE +D DGD F DE+ E+ ++  T+N+FEELMNEARNPLYPGCTKFSSLNFLVKLMH+KV
Subjt:  DDNNELFNLLNDLQGSM--REEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVKV

TrEMBL top hitse value%identityAlignment
A0A5A7SMM8 CACTA en-spm transposon protein7.9e-2438.59Show/hide
Query:  GIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVPSD
        G R + LADELV +ANTL M P TKGDSSS TK                                                         C  WKDV SD
Subjt:  GIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVPSD

Query:  AISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSEKD
         I TIKARLQ +FVV MSSM +NK +++++  +  +             C  TP            + ETI+K EEV Q+E          +  H S K+
Subjt:  AISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSEKD

Query:  EWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG
         +VAMQEEI K S+DG EPT EAIICE VLG  LGHTKGLG
Subjt:  EWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG

A0A5A7SP00 CACTA transposable element1.5e-1967.5Show/hide
Query:  DDNNELFNLLNDLQGSM--REEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVKV
        D+++++ +LL DLQGSM  REE +D DGD F DE+ E+ ++  T+N+FEELMNEARNPLYPGCTKFSSLNFLVKLMH+KV
Subjt:  DDNNELFNLLNDLQGSM--REEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVKV

A0A5A7UKB8 DUF4218 domain-containing protein2.4e-2065.48Show/hide
Query:  YKTHFSEKDEW----VAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLGWKATPNVAACTSTHVFKKDIGDTYEKLQPR
        ++ H S+   W    VAMQEEIRK S+DG +PT + II E+VL K  GHTKGLGWKATPNVA CTSTHVF+KDIGD YEKLQ +
Subjt:  YKTHFSEKDEW----VAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLGWKATPNVAACTSTHVFKKDIGDTYEKLQPR

A0A5D3B9X4 Uncharacterized protein2.6e-2761.26Show/hide
Query:  NKLREQPIARDDNNELFNLLNDLQGSMREEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVK-VYSLRQRQEASD
        ++LREQ    +D+NELFNLLNDLQG  +E  YDEDG+DF DE+H+NTEQRY  NIFEELM++ RN LYP CTKFSSLNFLVKLMHVK V+ L  +   + 
Subjt:  NKLREQPIARDDNNELFNLLNDLQGSMREEAYDEDGDDFGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVK-VYSLRQRQEASD

Query:  DLYSISLGPSN
        ++ S  L P++
Subjt:  DLYSISLGPSN

A0A5D3BM75 CACTA en-spm transposon protein2.7e-2438.68Show/hide
Query:  MAGIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVP
        M G R + LADELV +ANTL M P TKGDSSS TK                                                         C  WKDV 
Subjt:  MAGIRHNRLADELVWEANTLAMGPPTKGDSSSGTK--------------------------------------------------------ICVSWKDVP

Query:  SDAISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSE
        SD I TIKARLQ +FVV MSSM +NK +++++  +  +             C  TP            + ETI+K EEV Q+E          +  H S 
Subjt:  SDAISTIKARLQTHFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELF--------YKTHFSE

Query:  KDEWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG
        K+ +VAMQEEI K S+DG EPT EAIICE VLG  LGHTKGLG
Subjt:  KDEWVAMQEEIRKFSKDGFEPTLEAIICERVLGKCLGHTKGLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAACTAGTGGTGACCCTTTCTATGAAGGAACTAGTAATGACCCCTTCCATGATGGAACCGGTTATAATCTGTTTCCTGAAGACAATAAAATGTTGGCTATTCCG
CATTTTCATCCTTGATCCTTTTTGTTACGTTGATGCATTTAAAGGTTCTGAATGGTTGGAGCAACAAGTCGTTCGACATGATGCTAGAGATAATAAAACGGATTTGCAAC
ATTATCCAACCTGTGGGGAGTTTCAGTACAAGGACTCGTCTGACATGAGAGCACATAAGGATAAACGAGTCAAAACAGAGGACGTGTTGAGACATCTAGCTGATACAGTC
GCCCATAGCCACAAGCAGTATTTACCCCTTCGTCTGAAGATGGAACAATGTCTTTGGGCCACGTGCAAACCTCACAATGAGGAATGTCGCATGCGCTCTTGTCGCCTACA
CACCACGCCCATTGCGCGCATTGTGCTCCCCGCACACCCTACGACTAACCTTATAACACAAGGTCATGACCGCAGCCTGAATTCAATGGATTTATCATGGAGAATCAACA
AATTAAGGGAACAACCTATTGCTAGGGATGATAATAATGAGTTGTTTAACCTTTTAAATGATTTGCAAGGTTCGATGAGAGAAGAGGCATATGATGAGGATGGAGATGAC
TTTGGAGATGAGATACATGAGAACACTGAACAAAGGTATACTGCAAACATTTTTGAGGAGTTGATGAATGAAGCGCGTAATCCGTTATACCCTGGTTGTACCAAATTTTC
CTCGTTGAACTTCTTGGTGAAATTGATGCATGTCAAGGTTTATTCATTGCGTCAAAGACAAGAAGCATCTGACGATCTTTACTCAATATCACTTGGTCCTTCCAATCAAG
TTCGTCCTTACAATGGTTGCATTGTCAATGGAGTTCGTTTTCACAATGGACTGGTGGATGATGAATTAGAATTGTTGGAAATAGATGGAAGAATTGAGATAGCAGCGGCG
TTCGGCGACATTCAGATGTTAGCAAGTAGCAGCGGCGTTCGAATGGTGGGTTACGAGAAGAGGAAGAGGGAAATGGGGAGGATAGCAGCGGAATTTGGATGGTGGGTTGC
GAGAAGAGGAAGGGAAATCGAAAGGGTAGCGGCGGCGTTCAGATGGATTATGGCAGGAATACGTCACAATCGTTTGGCCGATGAACTAGTTTGGGAAGCTAACACATTGG
CTATGGGTCCCCCTACAAAAGGTGATAGTAGTTCAGGAACAAAAATTTGCGTGAGCTGGAAGGATGTGCCTAGTGATGCCATTTCCACTATAAAGGCTCGTCTACAAACC
CATTTTGTTGTGGATATGTCATCGATGGTTGTCAATAAGTACATGCATCGAAAAAATCAAACCTCATTTAGAGAATATAGATTAGAGCTACATAAGCACTATTGTTCGTT
TAAGTGTCCTATTACTCCTCGGGAAAGCCCACTGAACAGGTTATTGAACAAAAAAGATTGTGAGACGATCAATAAGGGTGAAGAAGTAGGCCAAATGGAGTTGTTTTACA
AAACTCACTTTTCAGAGAAGGATGAGTGGGTCGCAATGCAAGAAGAGATAAGAAAATTCTCAAAAGATGGATTTGAACCAACACTAGAGGCAATTATTTGTGAACGGGTT
TTGGGAAAATGTTTAGGTCATACTAAAGGTTTGGGATGGAAGGCAACTCCCAATGTAGCAGCATGCACATCGACCCATGTGTTTAAGAAAGATATTGGGGATACGTATGA
AAAGCTTCAACCGAGGCGATCAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAACTAGTGGTGACCCTTTCTATGAAGGAACTAGTAATGACCCCTTCCATGATGGAACCGGTTATAATCTGTTTCCTGAAGACAATAAAATGTTGGCTATTCCG
CATTTTCATCCTTGATCCTTTTTGTTACGTTGATGCATTTAAAGGTTCTGAATGGTTGGAGCAACAAGTCGTTCGACATGATGCTAGAGATAATAAAACGGATTTGCAAC
ATTATCCAACCTGTGGGGAGTTTCAGTACAAGGACTCGTCTGACATGAGAGCACATAAGGATAAACGAGTCAAAACAGAGGACGTGTTGAGACATCTAGCTGATACAGTC
GCCCATAGCCACAAGCAGTATTTACCCCTTCGTCTGAAGATGGAACAATGTCTTTGGGCCACGTGCAAACCTCACAATGAGGAATGTCGCATGCGCTCTTGTCGCCTACA
CACCACGCCCATTGCGCGCATTGTGCTCCCCGCACACCCTACGACTAACCTTATAACACAAGGTCATGACCGCAGCCTGAATTCAATGGATTTATCATGGAGAATCAACA
AATTAAGGGAACAACCTATTGCTAGGGATGATAATAATGAGTTGTTTAACCTTTTAAATGATTTGCAAGGTTCGATGAGAGAAGAGGCATATGATGAGGATGGAGATGAC
TTTGGAGATGAGATACATGAGAACACTGAACAAAGGTATACTGCAAACATTTTTGAGGAGTTGATGAATGAAGCGCGTAATCCGTTATACCCTGGTTGTACCAAATTTTC
CTCGTTGAACTTCTTGGTGAAATTGATGCATGTCAAGGTTTATTCATTGCGTCAAAGACAAGAAGCATCTGACGATCTTTACTCAATATCACTTGGTCCTTCCAATCAAG
TTCGTCCTTACAATGGTTGCATTGTCAATGGAGTTCGTTTTCACAATGGACTGGTGGATGATGAATTAGAATTGTTGGAAATAGATGGAAGAATTGAGATAGCAGCGGCG
TTCGGCGACATTCAGATGTTAGCAAGTAGCAGCGGCGTTCGAATGGTGGGTTACGAGAAGAGGAAGAGGGAAATGGGGAGGATAGCAGCGGAATTTGGATGGTGGGTTGC
GAGAAGAGGAAGGGAAATCGAAAGGGTAGCGGCGGCGTTCAGATGGATTATGGCAGGAATACGTCACAATCGTTTGGCCGATGAACTAGTTTGGGAAGCTAACACATTGG
CTATGGGTCCCCCTACAAAAGGTGATAGTAGTTCAGGAACAAAAATTTGCGTGAGCTGGAAGGATGTGCCTAGTGATGCCATTTCCACTATAAAGGCTCGTCTACAAACC
CATTTTGTTGTGGATATGTCATCGATGGTTGTCAATAAGTACATGCATCGAAAAAATCAAACCTCATTTAGAGAATATAGATTAGAGCTACATAAGCACTATTGTTCGTT
TAAGTGTCCTATTACTCCTCGGGAAAGCCCACTGAACAGGTTATTGAACAAAAAAGATTGTGAGACGATCAATAAGGGTGAAGAAGTAGGCCAAATGGAGTTGTTTTACA
AAACTCACTTTTCAGAGAAGGATGAGTGGGTCGCAATGCAAGAAGAGATAAGAAAATTCTCAAAAGATGGATTTGAACCAACACTAGAGGCAATTATTTGTGAACGGGTT
TTGGGAAAATGTTTAGGTCATACTAAAGGTTTGGGATGGAAGGCAACTCCCAATGTAGCAGCATGCACATCGACCCATGTGTTTAAGAAAGATATTGGGGATACGTATGA
AAAGCTTCAACCGAGGCGATCAACTTAA
Protein sequenceShow/hide protein sequence
MKELVVTLSMKELVMTPSMMEPVIICFLKTIKCWLFRIFILDPFCYVDAFKGSEWLEQQVVRHDARDNKTDLQHYPTCGEFQYKDSSDMRAHKDKRVKTEDVLRHLADTV
AHSHKQYLPLRLKMEQCLWATCKPHNEECRMRSCRLHTTPIARIVLPAHPTTNLITQGHDRSLNSMDLSWRINKLREQPIARDDNNELFNLLNDLQGSMREEAYDEDGDD
FGDEIHENTEQRYTANIFEELMNEARNPLYPGCTKFSSLNFLVKLMHVKVYSLRQRQEASDDLYSISLGPSNQVRPYNGCIVNGVRFHNGLVDDELELLEIDGRIEIAAA
FGDIQMLASSSGVRMVGYEKRKREMGRIAAEFGWWVARRGREIERVAAAFRWIMAGIRHNRLADELVWEANTLAMGPPTKGDSSSGTKICVSWKDVPSDAISTIKARLQT
HFVVDMSSMVVNKYMHRKNQTSFREYRLELHKHYCSFKCPITPRESPLNRLLNKKDCETINKGEEVGQMELFYKTHFSEKDEWVAMQEEIRKFSKDGFEPTLEAIICERV
LGKCLGHTKGLGWKATPNVAACTSTHVFKKDIGDTYEKLQPRRST