; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G22720 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G22720
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPMD domain-containing protein
Genome locationChr3:19390592..19391212
RNA-Seq ExpressionCSPI03G22720
SyntenyCSPI03G22720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]2.0e-6167.84Show/hide
Query:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT
        L  SENSKTPI  T     PLV   SPQ+V G KPI  +EISHFC DNLISDLRR T ITL E+LRQKII TP  +V+SL+PE+RKIF AI T  +NNLT
Subjt:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT

Query:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK
         L+ELVDGY QGVENHN++ S  LLQ TKDAQL E KGFVKTL+L+ENRIL ETS V+  L +LSAKE KLEAKL VVRT+S KLS +I KN+IELK K
Subjt:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]4.7e-6366.83Show/hide
Query:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV
        +PE  +A    SENSKTPI  TI    PLV   SPQ+V G +PI   EISHFCADNLISDLR+ T ITLWE+LRQKII TP  +V+SLEPE+RKIF AI 
Subjt:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV

Query:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN
        T G+NNLT L+E+VDGY QGVENHN++ S  LLQ TKDAQL EAKGFVKTL++++NRIL ETS V+  L +LSAKE KLEAKL  VRT+S KLS II KN
Subjt:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN

Query:  DIELK
        +IELK
Subjt:  DIELK

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]8.9e-6267.84Show/hide
Query:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT
        L  SENSKTPI  T     PLV   SPQ+V G KPI  +EISHFC DNLISDLRR T ITL E+LRQKII TP  +V+SL+PE+RKIF AI T  +NNLT
Subjt:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT

Query:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK
         L+ELVDGY QGVENHN++ S  LLQ TKDAQL E KGFVKTL+L+ENRIL ETS V+  L +LSAKE KLEAKL VVRT+S KLS +I KN+IELK K
Subjt:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]2.3e-6566.67Show/hide
Query:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV
        N E  N VL Y+ NSK PI   I  A P V  G PQ+V+G +PI   EISHFCAD+LISDLRR   ITLWENLRQKII TP  +++SLEPE+ KIFDAI 
Subjt:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV

Query:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN
        T G++NL +LRELV+GY QGVENHN+I S +LLQ TKD QLTEAKGFVKTL+++ENRILAET+  K  LT+LSAKE KLEAKL +VR +SAK S IIFKN
Subjt:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN

Query:  DIELKWK
        D+ELK K
Subjt:  DIELKWK

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.6e-6667.15Show/hide
Query:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV
        N E  N VL Y+ NSK PI   I  A P V  G PQ+V+G +PI   EISHFCAD+LISDLRR   ITLWENLRQKII TP  +++SLEPE+ KIFDAI 
Subjt:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV

Query:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN
        T G++NL +LRELV+GY QGVENHN+I S +LLQ TKD QLTEAKGFVKTL+++ENRILAET+  K  LT+LSAKE KLEAKL +VR +SAKLS IIFKN
Subjt:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN

Query:  DIELKWK
        D+ELK K
Subjt:  DIELKWK

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein9.7e-6267.84Show/hide
Query:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT
        L  SENSKTPI  T     PLV   SPQ+V G KPI  +EISHFC DNLISDLRR T ITL E+LRQKII TP  +V+SL+PE+RKIF AI T  +NNLT
Subjt:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT

Query:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK
         L+ELVDGY QGVENHN++ S  LLQ TKDAQL E KGFVKTL+L+ENRIL ETS V+  L +LSAKE KLEAKL VVRT+S KLS +I KN+IELK K
Subjt:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK

A0A5A7SJR1 Uncharacterized protein3.7e-5361.5Show/hide
Query:  VLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNL
        VL  SEN K PI  T     PLV   SPQ+V+G KPI A EISHFCADNLISDL+R T ITLWE+LRQKII T   +V++LE E+ KIFDAIVT  +N+L
Subjt:  VLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNL

Query:  TILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK
          LRELV GY QGVENHN++ S  LLQ TKDAQL + KGFV+ L+L+EN IL +TS V+  L QLSAKE KLE KL VV  +S KL  II +N+++LK K
Subjt:  TILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK

A0A5A7U4C3 Uncharacterized protein2.3e-6366.83Show/hide
Query:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV
        +PE  +A    SENSKTPI  TI    PLV   SPQ+V G +PI   EISHFCADNLISDLR+ T ITLWE+LRQKII TP  +V+SLEPE+RKIF AI 
Subjt:  NPEGYNAVLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIV

Query:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN
        T G+NNLT L+E+VDGY QGVENHN++ S  LLQ TKDAQL EAKGFVKTL++++NRIL ETS V+  L +LSAKE KLEAKL  VRT+S KLS II KN
Subjt:  TRGNNNLTILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKN

Query:  DIELK
        +IELK
Subjt:  DIELK

A0A5D3C453 Uncharacterized protein4.3e-6267.84Show/hide
Query:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT
        L  SENSKTPI  T     PLV   SPQ+V G KPI  +EISHFC DNLISDLRR T ITL E+LRQKII TP  +V+SL+PE+RKIF AI T  +NNLT
Subjt:  LIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLT

Query:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK
         L+ELVDGY QGVENHN++ S  LLQ TKDAQL E KGFVKTL+L+ENRIL ETS V+  L +LSAKE KLEAKL VVRT+S KLS +I KN+IELK K
Subjt:  ILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK

A0A5D3DHK0 Uncharacterized protein7.4e-5462Show/hide
Query:  VLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNL
        VL  SENSK PI  T     PLV   SPQ+V+G KPI A EISHFCADNLISDL+R T ITLWE+LRQKII T   +V++LE E+ KIFDAIVT  +N+L
Subjt:  VLIYSENSKTPISTTIELAHPLV--GSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNL

Query:  TILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK
          LRELV GY QGVENHN++ S  LLQ TKDAQL + KGFV+ L+L+EN IL +TS V+  L QLSAKE KLE KL VV  +S KL  II +N+++LK K
Subjt:  TILRELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCAGAAGGCTATAACGCTGTACTTATTTATAGTGAGAATTCTAAGACACCTATAAGTACAACTATCGAGTTAGCTCATCCTCTTGTGGGGTCCCCTCAACAAGT
GAAAGGAAAAAAGCCTATTGCAGCTTATGAGATTTCTCATTTTTGTGCAGACAACTTAATTTCTGACCTTCGGCGACATACTACCATAACCTTGTGGGAAAACCTACGAC
AGAAGATCATTCATACCCCTTTAGGGCAAGTAACTAGTCTTGAACCAGAACTGCGTAAGATCTTTGATGCAATTGTAACTCGTGGCAATAACAACCTTACCATTTTAAGG
GAGCTTGTGGATGGTTACTTACAAGGTGTCGAGAACCATAATCGAATACCTTCCTTATATTTACTCCAACTAACTAAGGATGCTCAGTTAACAGAGGCAAAAGGTTTTGT
GAAGACTCTGCAACTTAATGAGAATCGTATATTGGCAGAGACAAGCAATGTCAAACATCACCTTACACAGCTATCTGCCAAGGAGGTTAAACTAGAAGCAAAACTAATGG
TGGTGCGAACAGACTCCGCCAAACTTTCTGACATAATTTTCAAGAACGACATAGAGCTGAAGTGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCCAGAAGGCTATAACGCTGTACTTATTTATAGTGAGAATTCTAAGACACCTATAAGTACAACTATCGAGTTAGCTCATCCTCTTGTGGGGTCCCCTCAACAAGT
GAAAGGAAAAAAGCCTATTGCAGCTTATGAGATTTCTCATTTTTGTGCAGACAACTTAATTTCTGACCTTCGGCGACATACTACCATAACCTTGTGGGAAAACCTACGAC
AGAAGATCATTCATACCCCTTTAGGGCAAGTAACTAGTCTTGAACCAGAACTGCGTAAGATCTTTGATGCAATTGTAACTCGTGGCAATAACAACCTTACCATTTTAAGG
GAGCTTGTGGATGGTTACTTACAAGGTGTCGAGAACCATAATCGAATACCTTCCTTATATTTACTCCAACTAACTAAGGATGCTCAGTTAACAGAGGCAAAAGGTTTTGT
GAAGACTCTGCAACTTAATGAGAATCGTATATTGGCAGAGACAAGCAATGTCAAACATCACCTTACACAGCTATCTGCCAAGGAGGTTAAACTAGAAGCAAAACTAATGG
TGGTGCGAACAGACTCCGCCAAACTTTCTGACATAATTTTCAAGAACGACATAGAGCTGAAGTGGAAGTAG
Protein sequenceShow/hide protein sequence
MNPEGYNAVLIYSENSKTPISTTIELAHPLVGSPQQVKGKKPIAAYEISHFCADNLISDLRRHTTITLWENLRQKIIHTPLGQVTSLEPELRKIFDAIVTRGNNNLTILR
ELVDGYLQGVENHNRIPSLYLLQLTKDAQLTEAKGFVKTLQLNENRILAETSNVKHHLTQLSAKEVKLEAKLMVVRTDSAKLSDIIFKNDIELKWK