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CSPI03G22800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G22800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCDT1-like protein b
Genome locationChr3:19470343..19470717
RNA-Seq ExpressionCSPI03G22800
SyntenyCSPI03G22800
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0000278 - mitotic cell cycle (biological process)
GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process)
GO:0071163 - DNA replication preinitiation complex assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651274.1 hypothetical protein Csa_001826, partial [Cucumis sativus]5.5e-3278.51Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKR-KVALSIKEVKQAAQSVRESNRQ-LHHDLTTRGSKLVRRQMDSWSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQ LSS+TPEKP ER RKR KVALSI+EV++AAQSV ESN Q L HDLTT GSK+VRR+MDS SNES
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKR-KVALSIKEVKQAAQSVRESNRQ-LHHDLTTRGSKLVRRQMDSWSNES

Query:  QSSRS-KTCVDNK-SNKLPEK
        QSS S  TCVDNK SNKLPEK
Subjt:  QSSRS-KTCVDNK-SNKLPEK

XP_004151978.3 CDT1-like protein a, chloroplastic [Cucumis sativus]3.4e-5098.29Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
        MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQ LSSRTPEKPVERNRKRKVALSIKEVKQAAQSV ESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS

Query:  SRSKTCVDNKSNKLPEK
        SRSKTCVDNKSNKLPEK
Subjt:  SRSKTCVDNKSNKLPEK

XP_008447443.1 PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]1.9e-4086.32Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
        MADAS+ ISS SSTLPFKSKKNLGSN  SLLKDPQ LSS+TPEKP ER RKRKVALSIKEVK+AAQSV ESNRQL HDLTT+GSKLVRRQMDS SNES S
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS

Query:  SRSKTCVDNKSNKLPEK
        SRSKTCVD KSNKLPEK
Subjt:  SRSKTCVDNKSNKLPEK

XP_031737520.1 CDT1-like protein a, chloroplastic [Cucumis sativus]5.0e-4996.58Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
        MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQ LSSRTPEKPVERNRKRKVALSIKEVKQAAQSV ESNRQLHHDLTTRGSKLVRRQMDSWS ESQS
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS

Query:  SRSKTCVDNKSNKLPEK
        SRSKTCVDNKSNK PEK
Subjt:  SRSKTCVDNKSNKLPEK

XP_031739146.1 CDT1-like protein a, chloroplastic [Cucumis sativus]5.5e-3278.51Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKR-KVALSIKEVKQAAQSVRESNRQ-LHHDLTTRGSKLVRRQMDSWSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQ LSS+TPEKP ER RKR KVALSI+EV++AAQSV ESN Q L HDLTT GSK+VRR+MDS SNES
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKR-KVALSIKEVKQAAQSVRESNRQ-LHHDLTTRGSKLVRRQMDSWSNES

Query:  QSSRS-KTCVDNK-SNKLPEK
        QSS S  TCVDNK SNKLPEK
Subjt:  QSSRS-KTCVDNK-SNKLPEK

TrEMBL top hitse value%identityAlignment
A0A0A0L7I7 CDT1 domain-containing protein1.7e-5098.29Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
        MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQ LSSRTPEKPVERNRKRKVALSIKEVKQAAQSV ESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS

Query:  SRSKTCVDNKSNKLPEK
        SRSKTCVDNKSNKLPEK
Subjt:  SRSKTCVDNKSNKLPEK

A0A0A0LD77 Uncharacterized protein2.7e-3278.51Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKR-KVALSIKEVKQAAQSVRESNRQ-LHHDLTTRGSKLVRRQMDSWSNES
        MA ASNKISS SSTLPFKS KN+ SNS+SLLKDPQ LSS+TPEKP ER RKR KVALSI+EV++AAQSV ESN Q L HDLTT GSK+VRR+MDS SNES
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKR-KVALSIKEVKQAAQSVRESNRQ-LHHDLTTRGSKLVRRQMDSWSNES

Query:  QSSRS-KTCVDNK-SNKLPEK
        QSS S  TCVDNK SNKLPEK
Subjt:  QSSRS-KTCVDNK-SNKLPEK

A0A1S3BGW9 CDT1-like protein a, chloroplastic9.1e-4186.32Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
        MADAS+ ISS SSTLPFKSKKNLGSN  SLLKDPQ LSS+TPEKP ER RKRKVALSIKEVK+AAQSV ESNRQL HDLTT+GSKLVRRQMDS SNES S
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS

Query:  SRSKTCVDNKSNKLPEK
        SRSKTCVD KSNKLPEK
Subjt:  SRSKTCVDNKSNKLPEK

A0A5A7T8X4 CDT1-like protein a9.1e-4186.32Show/hide
Query:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS
        MADAS+ ISS SSTLPFKSKKNLGSN  SLLKDPQ LSS+TPEKP ER RKRKVALSIKEVK+AAQSV ESNRQL HDLTT+GSKLVRRQMDS SNES S
Subjt:  MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQS

Query:  SRSKTCVDNKSNKLPEK
        SRSKTCVD KSNKLPEK
Subjt:  SRSKTCVDNKSNKLPEK

A0A6J1HQP8 CDT1-like protein b6.1e-2973.73Show/hide
Query:  DASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVE---RNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQ
        DAS KISS SS+LPFKSKK L SNS SLL+D Q LSS+TPEK  E   R R RKVALSIKEV++AA+SVRESNRQL  DLTT GSK VRRQ+DSWSNES 
Subjt:  DASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVE---RNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQ

Query:  SSRSKTCVDNKSNKLPEK
        SSR KT VD K  KLPEK
Subjt:  SSRSKTCVDNKSNKLPEK

SwissProt top hitse value%identityAlignment
Q9SJW9 CDT1-like protein a, chloroplastic8.6e-0437.39Show/hide
Query:  SSTLPFKSKKNL-----GSNSSSLLKDPQPLSSRTPEKPVE----RNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQSSR
        S ++PFKSKK L      S S +   +P  ++  TPEKP+E    R+R R VALS+KE++QAA S R S   +        S    R     S+ S S R
Subjt:  SSTLPFKSKKNL-----GSNSSSLLKDPQPLSSRTPEKPVE----RNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQSSR

Query:  SKTCVDNKSNKLPEK
          +  + +  KLPEK
Subjt:  SKTCVDNKSNKLPEK

Arabidopsis top hitse value%identityAlignment
AT2G31270.1 homolog of yeast CDT1 A6.1e-0537.39Show/hide
Query:  SSTLPFKSKKNL-----GSNSSSLLKDPQPLSSRTPEKPVE----RNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQSSR
        S ++PFKSKK L      S S +   +P  ++  TPEKP+E    R+R R VALS+KE++QAA S R S   +        S    R     S+ S S R
Subjt:  SSTLPFKSKKNL-----GSNSSSLLKDPQPLSSRTPEKPVE----RNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQSSR

Query:  SKTCVDNKSNKLPEK
          +  + +  KLPEK
Subjt:  SKTCVDNKSNKLPEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGCTTCAAACAAGATTTCTTCTCGTTCATCAACTTTACCCTTCAAATCGAAGAAAAATTTGGGCTCCAACTCCTCATCATTGCTCAAGGATCCGCAACCTCT
AAGCTCCAGGACGCCGGAGAAGCCGGTGGAGCGAAATAGGAAACGGAAGGTTGCGCTTTCCATTAAAGAGGTTAAACAAGCTGCTCAGAGCGTCCGTGAATCTAATCGTC
AGTTGCATCATGATCTGACCACTAGAGGGAGTAAATTAGTTAGAAGACAGATGGATTCGTGGTCAAATGAAAGTCAATCTAGTAGATCCAAGACTTGTGTTGATAATAAG
TCAAATAAATTGCCTGAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
CTTTACTCTTAGTCTGTAATAATGGCGGACGCTTCAAACAAGATTTCTTCTCGTTCATCAACTTTACCCTTCAAATCGAAGAAAAATTTGGGCTCCAACTCCTCATCATT
GCTCAAGGATCCGCAACCTCTAAGCTCCAGGACGCCGGAGAAGCCGGTGGAGCGAAATAGGAAACGGAAGGTTGCGCTTTCCATTAAAGAGGTTAAACAAGCTGCTCAGA
GCGTCCGTGAATCTAATCGTCAGTTGCATCATGATCTGACCACTAGAGGGAGTAAATTAGTTAGAAGACAGATGGATTCGTGGTCAAATGAAAGTCAATCTAGTAGATCC
AAGACTTGTGTTGATAATAAGTCAAATAAATTGCCTGAAAAGTAA
Protein sequenceShow/hide protein sequence
MADASNKISSRSSTLPFKSKKNLGSNSSSLLKDPQPLSSRTPEKPVERNRKRKVALSIKEVKQAAQSVRESNRQLHHDLTTRGSKLVRRQMDSWSNESQSSRSKTCVDNK
SNKLPEK