| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037189.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.0e-52 | 37.33 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVF-
M+YKDS LSFL QGTLIQRSCPHTSQQNGRAERKH +ILDSVRAQLL +C + FWGE A PP + + +F
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVF-
Query: -----------------------------------------------------------LLKSF----------------TMFP----------------
L SF T+FP
Subjt: -----------------------------------------------------------LLKSF----------------TMFP----------------
Query: -----------HLNGYMVMVLNIKDFVVGIPSL-----------------NDYVDLVLSPF----------------------------------GNI--
HL+ + L + D +G L DYVDL F G I
Subjt: -----------HLNGYMVMVLNIKDFVVGIPSL-----------------NDYVDLVLSPF----------------------------------GNI--
Query: -----------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKD
APRAWFATFSSTITQLGFTSS+HDS LF+RQTS IVLLLLYVD MIITGDDPQ +SDLQ YL +HFE+KD
Subjt: -----------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKD
Query: LGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
LG L+YFLGLEISSS GYY+SQ KYAS+L+ RSGITDS TS T LDPNV
Subjt: LGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| KAA0041166.1 putative mitochondrial protein [Cucumis melo var. makuwa] | 4.8e-59 | 42.61 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP--------
MEYKDS LSFLA QGTLIQRSCPHTSQQNGRAERKH +ILDSV AQLL +C EKFWGE A L S T L P
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP--------
Query: ------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL-------------------------------------
HL Y +V + K+ + +L DYVDL
Subjt: ------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL-------------------------------------
Query: --------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFTSSS
+P + APRAWFATFSSTITQLGFTSSS
Subjt: --------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFTSSS
Query: HDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
HDS LFTRQT GIVLLLLYVD MIITGDDPQ +SDLQCYL KHFE+KDLG L+YFLGLEISSS GYY+SQ KYAS+L+ RSGITDS T STPLDPNV
Subjt: HDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| KAA0052097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 9.7e-52 | 36.12 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLNI---KDFV
+EYKDS LLSFL+ QGTL+QRSCPHTSQQNGRAERKH +ILDS RA LL +C EKFWGE A + VFL SF H YMV++L I K V
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLNI---KDFV
Query: VGI------------------------------------------------------------------------------------------PSLN---
V + PS +
Subjt: VGI------------------------------------------------------------------------------------------PSLN---
Query: -------------DYVDL---------------------------------------------VLSPFGNI-----------------------------
DYVDL +P +
Subjt: -------------DYVDL---------------------------------------------VLSPFGNI-----------------------------
Query: ---------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHF
APRAWFATFSSTITQLGFTSS HD+ LFTR T +GIVLLLLYVD MIITG+DPQ +SDLQ YL +HF
Subjt: ---------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHF
Query: EIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
E+KDLG+L+YFLGLE+S DGY +SQ KYAS+LL RSGITDS T+STPLDPNV
Subjt: EIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| KAA0058220.1 putative mitochondrial protein [Cucumis melo var. makuwa] | 5.0e-56 | 42.97 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVFL
MEYKDS LSFLA QGTLIQRSCPHT QQNGRAERKH +ILDSV QLL +C E FWGE A PP + VF
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVFL
Query: LKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------------FVVGIPSL----
F + PH + G M+ L +K+ FV + ++
Subjt: LKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------------FVVGIPSL----
Query: ----------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGD
Y ++ + P +G APRAWFATF+STITQLGFTSSSHDS LFTRQT GIVLLLLYVD MIITGD
Subjt: ----------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGD
Query: DPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
D Q +S+LQ YL K+FE+KDLG LSYF GLEISSS GYY+SQ KYAS+LL R G TDS T TPLDPNV
Subjt: DPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| XP_031738012.1 uncharacterized protein LOC116402635 [Cucumis sativus] | 1.4e-130 | 100 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLNIKDFVVGI
MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLNIKDFVVGI
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLNIKDFVVGI
Query: PSLNDYVDLVLSPFGNIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEI
PSLNDYVDLVLSPFGNIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEI
Subjt: PSLNDYVDLVLSPFGNIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEI
Query: SSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
SSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
Subjt: SSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TGJ6 Putative mitochondrial protein | 2.3e-59 | 42.61 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP--------
MEYKDS LSFLA QGTLIQRSCPHTSQQNGRAERKH +ILDSV AQLL +C EKFWGE A L S T L P
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP--------
Query: ------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL-------------------------------------
HL Y +V + K+ + +L DYVDL
Subjt: ------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL-------------------------------------
Query: --------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFTSSS
+P + APRAWFATFSSTITQLGFTSSS
Subjt: --------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFTSSS
Query: HDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
HDS LFTRQT GIVLLLLYVD MIITGDDPQ +SDLQCYL KHFE+KDLG L+YFLGLEISSS GYY+SQ KYAS+L+ RSGITDS T STPLDPNV
Subjt: HDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| A0A5A7UCC7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-52 | 36.12 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLNI---KDFV
+EYKDS LLSFL+ QGTL+QRSCPHTSQQNGRAERKH +ILDS RA LL +C EKFWGE A + VFL SF H YMV++L I K V
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLNI---KDFV
Query: VGI------------------------------------------------------------------------------------------PSLN---
V + PS +
Subjt: VGI------------------------------------------------------------------------------------------PSLN---
Query: -------------DYVDL---------------------------------------------VLSPFGNI-----------------------------
DYVDL +P +
Subjt: -------------DYVDL---------------------------------------------VLSPFGNI-----------------------------
Query: ---------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHF
APRAWFATFSSTITQLGFTSS HD+ LFTR T +GIVLLLLYVD MIITG+DPQ +SDLQ YL +HF
Subjt: ---------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHF
Query: EIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
E+KDLG+L+YFLGLE+S DGY +SQ KYAS+LL RSGITDS T+STPLDPNV
Subjt: EIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| A0A5A7UST7 Putative mitochondrial protein | 2.4e-56 | 42.97 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVFL
MEYKDS LSFLA QGTLIQRSCPHT QQNGRAERKH +ILDSV QLL +C E FWGE A PP + VF
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVFL
Query: LKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------------FVVGIPSL----
F + PH + G M+ L +K+ FV + ++
Subjt: LKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------------FVVGIPSL----
Query: ----------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGD
Y ++ + P +G APRAWFATF+STITQLGFTSSSHDS LFTRQT GIVLLLLYVD MIITGD
Subjt: ----------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGD
Query: DPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
D Q +S+LQ YL K+FE+KDLG LSYF GLEISSS GYY+SQ KYAS+LL R G TDS T TPLDPNV
Subjt: DPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| A0A5D3CPU5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.5e-53 | 37.33 | Show/hide |
Query: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVF-
M+YKDS LSFL QGTLIQRSCPHTSQQNGRAERKH +ILDSVRAQLL +C + FWGE A PP + + +F
Subjt: MEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVF-
Query: -----------------------------------------------------------LLKSF----------------TMFP----------------
L SF T+FP
Subjt: -----------------------------------------------------------LLKSF----------------TMFP----------------
Query: -----------HLNGYMVMVLNIKDFVVGIPSL-----------------NDYVDLVLSPF----------------------------------GNI--
HL+ + L + D +G L DYVDL F G I
Subjt: -----------HLNGYMVMVLNIKDFVVGIPSL-----------------NDYVDLVLSPF----------------------------------GNI--
Query: -----------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKD
APRAWFATFSSTITQLGFTSS+HDS LF+RQTS IVLLLLYVD MIITGDDPQ +SDLQ YL +HFE+KD
Subjt: -----------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKD
Query: LGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
LG L+YFLGLEISSS GYY+SQ KYAS+L+ RSGITDS TS T LDPNV
Subjt: LGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
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| A0A5D3DAW5 Integrase, catalytic core | 7.5e-50 | 37.09 | Show/hide |
Query: SHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVFLLKSFT
+ LSFLA QGTLIQRSCPHTSQQNGRAERKH +ILDSVRAQLL +C EKFWGE A P + + VF F
Subjt: SHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA---------------------------PPLFMSSTVFLLKSFT
Query: MF---------PHLN-----GY----MVMVLNIKDFVVGIPSLN--------------------------------------------------------
+ P GY V++ ++ ++ P+ N
Subjt: MF---------PHLN-----GY----MVMVLNIKDFVVGIPSLN--------------------------------------------------------
Query: ----------DYVDL--------------------VLSPFGNI---------------------------------------------------------
DYV+ +P +
Subjt: ----------DYVDL--------------------VLSPFGNI---------------------------------------------------------
Query: -----APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQG
APR WFATFSSTI QLGFTSSSHDS LFTRQTSRGIVLLLLYVD MIIT DDP +SDLQCYL KHFE+KDLG L+YFLGLEISSS GY++SQ
Subjt: -----APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQG
Query: KYASNLLRRSGITDSTTSSTPLDPNV
KYA +LLRRS I DS T STPLDPNV
Subjt: KYASNLLRRSGITDSTTSSTPLDPNV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.3e-10 | 28.46 | Show/hide |
Query: APRAWFATFSSTITQLGFTSSSHDSILF--TRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYA
A R WF F + + F +SS D ++ + + +LLYVD ++I D M++ + YL + F + DL + +F+G+ I D Y+SQ Y
Subjt: APRAWFATFSSTITQLGFTSSSHDSILF--TRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYA
Query: SNLLRRSGITDSTTSSTPLDPNV
+L + + + STPL +
Subjt: SNLLRRSGITDSTTSSTPLDPNV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.6e-11 | 35 | Show/hide |
Query: APRAWFATFSSTI-TQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEI--SSSYDGYYISQGKY
APR W+ F S + +Q + S + F R + ++LLLYVD M+I G D +++ L+ LSK F++KDLG LG++I + ++SQ KY
Subjt: APRAWFATFSSTI-TQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEI--SSSYDGYYISQGKY
Query: ASNLLRRSGITDSTTSSTPL
+L R + ++ STPL
Subjt: ASNLLRRSGITDSTTSSTPL
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 8.6e-11 | 43.04 | Show/hide |
Query: LLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPL
LLLYVD +++TG +++ L LS F +KDLG + YFLG++I + G ++SQ KYA +L +G+ D STPL
Subjt: LLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-16 | 36.67 | Show/hide |
Query: APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN
APRAW+ + + +GF +S D+ LF Q + IV +L+YVD ++ITG+DP ++ + LS+ F +KD L YFLG+E G ++SQ +Y +
Subjt: APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN
Query: LLRRSGITDSTTSSTPLDPN
LL R+ + + +TP+ P+
Subjt: LLRRSGITDSTTSSTPLDPN
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.8e-15 | 35.04 | Show/hide |
Query: APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN
APRAW+ + + +GF +S D+ LF Q R I+ +L+YVD ++ITG+D ++ LS+ F +K+ L YFLG+E G ++SQ +Y +
Subjt: APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN
Query: LLRRSGITDSTTSSTPL
LL R+ + + +TP+
Subjt: LLRRSGITDSTTSSTPL
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