; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G23130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G23130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpentatricopeptide repeat-containing protein At4g04790, mitochondrial-like
Genome locationChr3:19948178..19952273
RNA-Seq ExpressionCSPI03G23130
SyntenyCSPI03G23130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046451.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.1e-17188.65Show/hide
Query:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC
        MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLC
Subjt:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC

Query:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSV SPEAQGNCVE+SLEKLLDIPWFSIKTNHSLTLH KEIS ERK  WVLKNTQSDRFRRLVRSCA+RLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAEK LLAFKTSG
Subjt:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

KAE8637216.1 hypothetical protein CSA_021119 [Cucumis sativus]6.9e-19899.72Show/hide
Query:  MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP
        MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP
Subjt:  MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP

Query:  EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK
        EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK
Subjt:  EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK

Query:  DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
        DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
Subjt:  DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL

Query:  QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSGM
        QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG+
Subjt:  QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSGM

XP_008454564.1 PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucumis melo]1.1e-17188.65Show/hide
Query:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC
        MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLC
Subjt:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC

Query:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSV SPEAQGNCVE+SLEKLLDIPWFSIKTNHSLTLH KEIS ERK  WVLKNTQSDRFRRLVRSCA+RLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAEK LLAFKTSG
Subjt:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

XP_011651464.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Cucumis sativus]1.2e-197100Show/hide
Query:  MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP
        MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP
Subjt:  MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP

Query:  EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK
        EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK
Subjt:  EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK

Query:  DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
        DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
Subjt:  DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL

Query:  QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
Subjt:  QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

XP_022981387.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucurbita maxima]1.1e-14575.76Show/hide
Query:  LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAIN-----SPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMS
        LSSL RSAII+SK SQN QDAAL+NYVS IDP SPSTSLS AI+     S  SKKLPQ  NSDVQFPALILEE S SGD  KHL KAISS+LCEGSSV S
Subjt:  LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAIN-----SPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMS

Query:  PEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKAS
        P+AQ N  E SL++LLDIPWFS  +NHS++L R+EISRERK  W+ KN+Q+ RF +LVR+CA +LG+DVTLEVFGKLGRETGVKEYNAL+ ICLEKAK S
Subjt:  PEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKAS

Query:  KDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFS
        KD+EVVLE I KVYQLFKLMKE GF LEDETYGPVLA LIDMDMMEEFNFFCEA+KDGNPGS SRLGYY+MLFY+KIND EK+QELC  AT  DGVDK+S
Subjt:  KDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFS

Query:  LQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        LQENYLLALC  EQK+ELLQMLE++DITKL++TV+A NIFK LGRL LH+ AEK L+A KTSG
Subjt:  LQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

TrEMBL top hitse value%identityAlignment
A0A0A0L854 Uncharacterized protein5.0e-20299.73Show/hide
Query:  MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP
        MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP
Subjt:  MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSP

Query:  EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK
        EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK
Subjt:  EAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASK

Query:  DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
        DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
Subjt:  DVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL

Query:  QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSGMLMIALKFY
        QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG LMIALKFY
Subjt:  QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSGMLMIALKFY

A0A1S3C047 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X15.4e-17288.65Show/hide
Query:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC
        MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLC
Subjt:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC

Query:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSV SPEAQGNCVE+SLEKLLDIPWFSIKTNHSLTLH KEIS ERK  WVLKNTQSDRFRRLVRSCA+RLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAEK LLAFKTSG
Subjt:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

A0A5D3BES4 Pentatricopeptide repeat-containing protein5.4e-17288.65Show/hide
Query:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC
        MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLC
Subjt:  MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLC

Query:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC
        EGSSV SPEAQGNCVE+SLEKLLDIPWFSIKTNHSLTLH KEIS ERK  WVLKNTQSDRFRRLVRSCA+RLGSDVTLEVFGKLGRETGVKEY+ALVGIC
Subjt:  EGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC

Query:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
        LEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Subjt:  LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD

Query:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAEK LLAFKTSG
Subjt:  DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

A0A6J1FIW6 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X16.6e-14675.48Show/hide
Query:  LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNA-----INSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMS
        LSSL RSAII+SK SQN QDAAL+NYVS IDP SPSTSLS A     I S  SKKLPQ  NSDVQFPALILEE S SGD  KHL KAISS+LCEGSSV S
Subjt:  LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNA-----INSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMS

Query:  PEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKAS
        P+AQ N  E SL++LLDIPWFS  +NHS++L R+EISRERK  W+ KN+Q+ RF +LVR+CA +LG+DVTLEVFGKLGRETGVKEYNAL+ ICLEKAK S
Subjt:  PEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKAS

Query:  KDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFS
        KD+EVVLEQI KVYQLFKLMKE GF LEDETYGPVL  LIDMDMMEEFNFFCEA+KDGNPGS SRLGYY+MLFY+KIND EK+QELC  A   DGVDK+S
Subjt:  KDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFS

Query:  LQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        LQENYLLALC  EQK+ELLQMLE++DITKLS+TV+A N+FK LGRL LH+ AEK L+A KTSG
Subjt:  LQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

A0A6J1ITU1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X15.1e-14675.76Show/hide
Query:  LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAIN-----SPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMS
        LSSL RSAII+SK SQN QDAAL+NYVS IDP SPSTSLS AI+     S  SKKLPQ  NSDVQFPALILEE S SGD  KHL KAISS+LCEGSSV S
Subjt:  LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAIN-----SPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMS

Query:  PEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKAS
        P+AQ N  E SL++LLDIPWFS  +NHS++L R+EISRERK  W+ KN+Q+ RF +LVR+CA +LG+DVTLEVFGKLGRETGVKEYNAL+ ICLEKAK S
Subjt:  PEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKAS

Query:  KDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFS
        KD+EVVLE I KVYQLFKLMKE GF LEDETYGPVLA LIDMDMMEEFNFFCEA+KDGNPGS SRLGYY+MLFY+KIND EK+QELC  AT  DGVDK+S
Subjt:  KDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFS

Query:  LQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG
        LQENYLLALC  EQK+ELLQMLE++DITKL++TV+A NIFK LGRL LH+ AEK L+A KTSG
Subjt:  LQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSG

SwissProt top hitse value%identityAlignment
O49711 Pentatricopeptide repeat-containing protein At4g21880, mitochondrial2.3e-4239.91Show/hide
Query:  KEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG
        K+ SR R      +N QS+   +L + C  +LG++   EV  K+G+E G KEYNA+  +C+++A+ S D E  L+QIGK  +  K M++ GFS+ +  YG
Subjt:  KEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG

Query:  PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTT
        P    L+DM+M+ EF    + IK+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALC  + K+   ++LE++DIT +S+ 
Subjt:  PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTT

Query:  VVAPNIFKSLGRLSLHTFAEKSL
            +IF  LG+  L + A K L
Subjt:  VVAPNIFKSLGRLSLHTFAEKSL

Q6NQ81 Pentatricopeptide repeat-containing protein At4g04790, mitochondrial9.8e-5443.19Show/hide
Query:  EESLEK--LLDIPWFSIKTNHSLTLHRKEISRERKHNWVLK-NTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEV
        + SLEK   L IP F+ K  + ++L  KE+SRERK   V K N  S RF ++ R  A +LG++     F ++ +E  V EYNA++G+ LE A+ S D++ 
Subjt:  EESLEK--LLDIPWFSIKTNHSLTLHRKEISRERKHNWVLK-NTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEV

Query:  VLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENY
         L  I K ++L K M+++GF +E+  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGYY+ML +I + D EK++ELC     D+G     LQENY
Subjt:  VLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENY

Query:  LLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTS
        LLALC  +QK  L ++LE++DITK+ ++ +  NIF+ LGR SL + A + L   + S
Subjt:  LLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTS

Arabidopsis top hitse value%identityAlignment
AT4G04790.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.0e-5543.19Show/hide
Query:  EESLEK--LLDIPWFSIKTNHSLTLHRKEISRERKHNWVLK-NTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEV
        + SLEK   L IP F+ K  + ++L  KE+SRERK   V K N  S RF ++ R  A +LG++     F ++ +E  V EYNA++G+ LE A+ S D++ 
Subjt:  EESLEK--LLDIPWFSIKTNHSLTLHRKEISRERKHNWVLK-NTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEV

Query:  VLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENY
         L  I K ++L K M+++GF +E+  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGYY+ML +I + D EK++ELC     D+G     LQENY
Subjt:  VLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENY

Query:  LLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTS
        LLALC  +QK  L ++LE++DITK+ ++ +  NIF+ LGR SL + A + L   + S
Subjt:  LLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKTS

AT4G21880.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-4339.91Show/hide
Query:  KEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG
        K+ SR R      +N QS+   +L + C  +LG++   EV  K+G+E G KEYNA+  +C+++A+ S D E  L+QIGK  +  K M++ GFS+ +  YG
Subjt:  KEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG

Query:  PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTT
        P    L+DM+M+ EF    + IK+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALC  + K+   ++LE++DIT +S+ 
Subjt:  PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTT

Query:  VVAPNIFKSLGRLSLHTFAEKSL
            +IF  LG+  L + A K L
Subjt:  VVAPNIFKSLGRLSLHTFAEKSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTATTGATCCTTT
ATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTT
CGGATTCTGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGAAGGCTCATCTGTTATGTCTCCTGAAGCACAAGGAAATTGTGTTGAAGAATCT
TTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCGCAAAGAAATATCCCGGGAAAGAAAGCATAACTGGGTATTAAAAAA
TACCCAGAGCGATAGATTTAGACGATTAGTTAGAAGTTGCGCAAACAGGCTGGGGAGTGATGTTACTCTAGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAG
AATACAATGCACTAGTAGGCATATGTTTAGAGAAGGCTAAGGCAAGTAAGGACGTGGAGGTTGTATTGGAACAGATTGGGAAGGTTTATCAGCTATTTAAACTAATGAAA
GAACAGGGTTTCTCATTAGAAGATGAAACTTATGGCCCAGTGCTTGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGG
AAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAGATGTTGTTCTATATTAAAATCAATGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATG
GAGTGGACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCACTCTGTGGAAGTGAGCAGAAGAAGGAACTTTTACAGATGCTGGAAGTTATAGACATCACAAAACTTTCG
ACAACTGTAGTTGCACCTAACATCTTCAAATCCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTCACTTTTGGCGTTTAAAACTTCTGGTATGTTGATGATTGC
CTTAAAATTTTATTGA
mRNA sequenceShow/hide mRNA sequence
GAACCAGCCAAAATCGGAAAGTTGCCCTGGCCGATAAACCCCGAAAACCCAGCTGAGAGCGGTGCAGCTCAATTCGCCGGAGACCGGGAAGTTGCGGACCTCTTGGAATC
TGATTCTCCAATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTA
TTGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTA
GAAGAGTCTTCGGATTCTGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGAAGGCTCATCTGTTATGTCTCCTGAAGCACAAGGAAATTGTGT
TGAAGAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCGCAAAGAAATATCCCGGGAAAGAAAGCATAACTGGG
TATTAAAAAATACCCAGAGCGATAGATTTAGACGATTAGTTAGAAGTTGCGCAAACAGGCTGGGGAGTGATGTTACTCTAGAAGTCTTTGGTAAATTGGGACGAGAAACT
GGTGTGAAAGAATACAATGCACTAGTAGGCATATGTTTAGAGAAGGCTAAGGCAAGTAAGGACGTGGAGGTTGTATTGGAACAGATTGGGAAGGTTTATCAGCTATTTAA
ACTAATGAAAGAACAGGGTTTCTCATTAGAAGATGAAACTTATGGCCCAGTGCTTGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTA
TAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAGATGTTGTTCTATATTAAAATCAATGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACA
GTTGATGATGGAGTGGACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCACTCTGTGGAAGTGAGCAGAAGAAGGAACTTTTACAGATGCTGGAAGTTATAGACATCAC
AAAACTTTCGACAACTGTAGTTGCACCTAACATCTTCAAATCCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTCACTTTTGGCGTTTAAAACTTCTGGTATGT
TGATGATTGCCTTAAAATTTTATTGA
Protein sequenceShow/hide protein sequence
MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEES
LEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMK
EQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLS
TTVVAPNIFKSLGRLSLHTFAEKSLLAFKTSGMLMIALKFY