; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G23140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G23140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr3:19963073..19964381
RNA-Seq ExpressionCSPI03G23140
SyntenyCSPI03G23140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032570.1 protein SAND [Cucumis melo var. makuwa]7.7e-4046.46Show/hide
Query:  KFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKET--------------------
        +FFW+GN   KLN+LVKW+ V KS  DG L L KLK +NMALL+KW WRF  E +SLWC+V+ SIH S TF WH++ KE+                    
Subjt:  KFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKET--------------------

Query:  ---------------HPWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF
                        PWM+ I L  KFPRL RIAL P GSV+N+WDSS++SWSI FR  L +EEI DF+ LL  +   +  +  ++R WSLE  G F
Subjt:  ---------------HPWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF

KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]3.0e-4440.15Show/hide
Query:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETH-----------------
        MR FF +G+   K+N LV W+ V    KDGGL LG +K  N ALL+KWGWR+SKE+++LW QVI SIHG   F+W +  K  +                 
Subjt:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETH-----------------

Query:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF
                          PW+    ++ +F RL RIAL P  S          SW + FRRSL DEEI +F++LL  +S  +  +  D R WS+E+ G F
Subjt:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF

Query:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL
          KSL  HL T+SP++  L+    +S SPRRINI IWIM+F  +  + +LQ+K S   +SP +CPLC   S+ L
Subjt:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL

RVW29541.1 Kinesin-like protein KIN-14I [Vitis vinifera]1.6e-3739.26Show/hide
Query:  LSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLER
        ++ +ER  R F W G   GK +HLV+W+AV K    GGL +GK+  +N ALL KW WRF +E  SLW QVI+SI+G+ +  W +N  E   W D I L+ 
Subjt:  LSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLER

Query:  KFPRLVRIALNPNGSVSNHWDS-STNSWSIYFRRSLNDEEILDFRTLLSQIS-PSQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRF-WK
        ++PRL R+ ++ N  +S+   S    SW+  FRR+L D EI D   L+  +   + S S  D R WSL +SG F VKS    LS       F   +F WK
Subjt:  KFPRLVRIALNPNGSVSNHWDS-STNSWSIYFRRSLNDEEILDFRTLLSQIS-PSQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRF-WK

Query:  SNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC
        S  P ++   +W++  + L+   +LQ +    A SP +C LC
Subjt:  SNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC

RVW56511.1 putative ribonuclease H protein [Vitis vinifera]2.7e-3737.45Show/hide
Query:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNE--KETH--P
        +P S  + +ER+ R F W G   GK +HLV+WD V K    GGL LG +  +N+ALL KW WR+ +E ++LW QVI+SI+GS +  W +N   + +H  P
Subjt:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNE--KETH--P

Query:  WMDIITLERKFPRLVRIALNPNGSVSNHWDSSTN-SWSIYFRRSLNDEEILDFRTLLSQISPSQ-SASFPDQRFWSLETSGSFLVKSLVKHLSTSS-PLE
        W  I  + + F  + R+ ++ N S+S+    S    W++ FRR+L+D EI D   L+  +     S S PD R W L +SG F VKS    LS SS   +
Subjt:  WMDIITLERKFPRLVRIALNPNGSVSNHWDSSTN-SWSIYFRRSLNDEEILDFRTLLSQISPSQ-SASFPDQRFWSLETSGSFLVKSLVKHLSTSS-PLE

Query:  SFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC
        +F  K  W S  P ++   +W++  + ++   +LQ +    ALSP +C LC
Subjt:  SFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]3.3e-4339.78Show/hide
Query:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHS-----NEKETH------------
        MR FF +G+   K+N LV W+ V    KDGGL LG +K  N ALL+KWGWR+SKE+++LW QVI SIHG   F+W +     N   +H            
Subjt:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHS-----NEKETH------------

Query:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF
                          PW+    ++ +F RL  IAL P             SW + FRRSL DEEI +F++LL  +S  +  +  D R WS+E+ G F
Subjt:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF

Query:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL
          KSL  HL T+SP++  L+    +S SPRRINI IWIM+F  ++ + +LQ+K S   +SP +CPLC   S+ L
Subjt:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL

TrEMBL top hitse value%identityAlignment
A0A438D291 Kinesin-like protein KIN-14I7.8e-3839.26Show/hide
Query:  LSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLER
        ++ +ER  R F W G   GK +HLV+W+AV K    GGL +GK+  +N ALL KW WRF +E  SLW QVI+SI+G+ +  W +N  E   W D I L+ 
Subjt:  LSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLER

Query:  KFPRLVRIALNPNGSVSNHWDS-STNSWSIYFRRSLNDEEILDFRTLLSQIS-PSQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRF-WK
        ++PRL R+ ++ N  +S+   S    SW+  FRR+L D EI D   L+  +   + S S  D R WSL +SG F VKS    LS       F   +F WK
Subjt:  KFPRLVRIALNPNGSVSNHWDS-STNSWSIYFRRSLNDEEILDFRTLLSQIS-PSQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRF-WK

Query:  SNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC
        S  P ++   +W++  + L+   +LQ +    A SP +C LC
Subjt:  SNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC

A0A438F983 Putative ribonuclease H protein1.3e-3737.45Show/hide
Query:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNE--KETH--P
        +P S  + +ER+ R F W G   GK +HLV+WD V K    GGL LG +  +N+ALL KW WR+ +E ++LW QVI+SI+GS +  W +N   + +H  P
Subjt:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNE--KETH--P

Query:  WMDIITLERKFPRLVRIALNPNGSVSNHWDSSTN-SWSIYFRRSLNDEEILDFRTLLSQISPSQ-SASFPDQRFWSLETSGSFLVKSLVKHLSTSS-PLE
        W  I  + + F  + R+ ++ N S+S+    S    W++ FRR+L+D EI D   L+  +     S S PD R W L +SG F VKS    LS SS   +
Subjt:  WMDIITLERKFPRLVRIALNPNGSVSNHWDSSTN-SWSIYFRRSLNDEEILDFRTLLSQISPSQ-SASFPDQRFWSLETSGSFLVKSLVKHLSTSS-PLE

Query:  SFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC
        +F  K  W S  P ++   +W++  + ++   +LQ +    ALSP +C LC
Subjt:  SFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC

A0A5A7SP09 Vacuolar fusion protein MON1 homolog3.7e-4046.46Show/hide
Query:  KFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKET--------------------
        +FFW+GN   KLN+LVKW+ V KS  DG L L KLK +NMALL+KW WRF  E +SLWC+V+ SIH S TF WH++ KE+                    
Subjt:  KFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKET--------------------

Query:  ---------------HPWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF
                        PWM+ I L  KFPRL RIAL P GSV+N+WDSS++SWSI FR  L +EEI DF+ LL  +   +  +  ++R WSLE  G F
Subjt:  ---------------HPWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF

A0A5A7T2Y0 zf-RVT domain-containing protein1.5e-4440.15Show/hide
Query:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETH-----------------
        MR FF +G+   K+N LV W+ V    KDGGL LG +K  N ALL+KWGWR+SKE+++LW QVI SIHG   F+W +  K  +                 
Subjt:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETH-----------------

Query:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF
                          PW+    ++ +F RL RIAL P  S          SW + FRRSL DEEI +F++LL  +S  +  +  D R WS+E+ G F
Subjt:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF

Query:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL
          KSL  HL T+SP++  L+    +S SPRRINI IWIM+F  +  + +LQ+K S   +SP +CPLC   S+ L
Subjt:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL

A0A5D3DE60 zf-RVT domain-containing protein1.6e-4339.78Show/hide
Query:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHS-----NEKETH------------
        MR FF +G+   K+N LV W+ V    KDGGL LG +K  N ALL+KWGWR+SKE+++LW QVI SIHG   F+W +     N   +H            
Subjt:  MRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHS-----NEKETH------------

Query:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF
                          PW+    ++ +F RL  IAL P             SW + FRRSL DEEI +F++LL  +S  +  +  D R WS+E+ G F
Subjt:  ------------------PWMDIITLERKFPRLVRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSF

Query:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL
          KSL  HL T+SP++  L+    +S SPRRINI IWIM+F  ++ + +LQ+K S   +SP +CPLC   S+ L
Subjt:  LVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLCNNVSQIL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.2e-1143.42Show/hide
Query:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVI
        +P+S L+ L+++ R F W      K  HLVKW  V    K+GGL +   K  N AL+SK GWR  +E+NSLW  V+
Subjt:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein9.8e-0921.99Show/hide
Query:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIIS--IHGSSTFNWHSNEKETHPWM
        +P++    +  ++  F+W+  +  K  H   WD +     +GG+    ++  N+ALL K  WR      SL  +V  S   H S   N     + +  W 
Subjt:  MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIIS--IHGSSTFNWHSNEKETHPWM

Query:  DIITLERKFPRLVRIALNPNGSVSNHW-----DSSTNSWSIYFRR----------------SLNDE-------EILDF------RTLLSQISPSQSASFP
         I   +    +  R A+  NG     W     DS   S ++  +R                 L DE       ++++       R L+ ++ P       
Subjt:  DIITLERKFPRLVRIALNPNGSVSNHW-----DSSTNSWSIYFRR----------------SLNDE-------EILDF------RTLLSQISPSQSASFP

Query:  DQRFWSLETSGSFLVKS-------LVKHLST----SSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC
        D   W   +SG + VKS       ++   S+    S P  + +Y++ WKS +  +I   +W  L  +L  A  L  +  S   +   CP C
Subjt:  DQRFWSLETSGSFLVKS-------LVKHLST----SSPLESFLYKRFWKSNSPRRINISIWIMLFENLDCASVLQRKLSSHALSPYVCPLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAA
ATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTC
AAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTG
GTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGA
TTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTA
AGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAAT
TTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAA
GAAGAAGACAGCGGAACTATACCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGAATCTGCTCTAAGCTCTTTGGAAAGAATCATGAGAAAGTTCTTTTGGAAAGGAAACAAGGTAGGAAAGCTAAACCACCTAGTAAAATGGGATGCTGTAATTAA
ATCCTACAAAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATATGGCCCTATTGTCTAAGTGGGGATGGCGTTTCTCAAAAGAACAAAATTCACTTTGGTGTC
AAGTGATCATAAGCATTCATGGAAGTAGTACTTTCAACTGGCATTCAAATGAAAAAGAAACCCACCCTTGGATGGACATTATCACTTTGGAGCGTAAATTTCCAAGATTG
GTTAGGATCGCACTCAATCCAAATGGGTCTGTTTCAAATCATTGGGACTCTTCAACCAACTCTTGGTCCATCTATTTCAGAAGATCGCTAAATGATGAGGAAATTTTAGA
TTTTCGGACCTTGTTGAGTCAGATTTCTCCTTCACAGTCAGCCTCATTTCCAGATCAAAGGTTTTGGTCCCTTGAAACCTCAGGTTCCTTCTTGGTAAAATCACTGGTTA
AGCATCTTTCGACATCTTCTCCATTGGAAAGTTTTTTGTACAAAAGGTTTTGGAAATCTAACAGTCCAAGAAGGATAAATATTTCCATATGGATTATGCTCTTCGAAAAT
TTAGACTGTGCCTCAGTACTTCAAAGAAAGCTTTCCTCCCATGCCCTCTCACCTTATGTCTGCCCCCTTTGTAACAATGTGTCTCAAATTCTTGCTGGTCCAGACTTGAA
GAAGAAGACAGCGGAACTATACCTTCTACTTCAATATGTTTTTGCTCAATCAAGGACTCAGCTTGGTGCCTTGTGA
Protein sequenceShow/hide protein sequence
MPESALSSLERIMRKFFWKGNKVGKLNHLVKWDAVIKSYKDGGLSLGKLKHKNMALLSKWGWRFSKEQNSLWCQVIISIHGSSTFNWHSNEKETHPWMDIITLERKFPRL
VRIALNPNGSVSNHWDSSTNSWSIYFRRSLNDEEILDFRTLLSQISPSQSASFPDQRFWSLETSGSFLVKSLVKHLSTSSPLESFLYKRFWKSNSPRRINISIWIMLFEN
LDCASVLQRKLSSHALSPYVCPLCNNVSQILAGPDLKKKTAELYLLLQYVFAQSRTQLGAL