| GenBank top hits | e value | %identity | Alignment |
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| KAA0051006.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.3e-84 | 59.55 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKPV+EQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDLKLQ+LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGK
T GVIGKGK
Subjt: TVGVIGKGK
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| TYK05597.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.3e-84 | 58.15 | Show/hide |
Query: PWSGRICIRAEPLAVTTNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKP
P S RI A + T +VKK D EK+ DN TVR HLLNHMSD MF+LF+ Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKP
Subjt: PWSGRICIRAEPLAVTTNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKP
Query: VVEQIN---------------------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHD
VVEQI+ NDY+NHLKHKKKDLKLQ+LISHMRTEEANKLKDKLAS+N+NSVNANLVESS VNRD++K +
Subjt: VVEQIN---------------------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHD
Query: KRQNGRTSE----------------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHD
K G+ SE KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHD
Subjt: KRQNGRTSE----------------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHD
Query: YKDIADGEYVFMENSVTVGVIGKGK
Y+D ADGE VFM NS T GVIGKGK
Subjt: YKDIADGEYVFMENSVTVGVIGKGK
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| TYK11996.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 5.0e-88 | 59.32 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKPVVEQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDL+L +LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGKELSVWEFVESGES
T GVIGKGKE VWE VESG +
Subjt: TVGVIGKGKELSVWEFVESGES
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| TYK24060.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.9e-87 | 59.01 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQM DDKPVVEQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDL+L +LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGKELSVWEFVESGES
T GVIGKGKE VWE VESG +
Subjt: TVGVIGKGKELSVWEFVESGES
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| TYK26791.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-84 | 59.87 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKPVVEQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDLKLQ+LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGK
T GVIGKGK
Subjt: TVGVIGKGK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U9X9 Ty1-copia retrotransposon protein | 1.6e-84 | 59.55 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKPV+EQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDLKLQ+LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGK
T GVIGKGK
Subjt: TVGVIGKGK
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| A0A5D3C1A6 Ty1-copia retrotransposon protein | 1.6e-84 | 58.15 | Show/hide |
Query: PWSGRICIRAEPLAVTTNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKP
P S RI A + T +VKK D EK+ DN TVR HLLNHMSD MF+LF+ Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKP
Subjt: PWSGRICIRAEPLAVTTNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKP
Query: VVEQIN---------------------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHD
VVEQI+ NDY+NHLKHKKKDLKLQ+LISHMRTEEANKLKDKLAS+N+NSVNANLVESS VNRD++K +
Subjt: VVEQIN---------------------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHD
Query: KRQNGRTSE----------------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHD
K G+ SE KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHD
Subjt: KRQNGRTSE----------------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHD
Query: YKDIADGEYVFMENSVTVGVIGKGK
Y+D ADGE VFM NS T GVIGKGK
Subjt: YKDIADGEYVFMENSVTVGVIGKGK
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| A0A5D3CNJ2 Ty1-copia retrotransposon protein | 2.4e-88 | 59.32 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKPVVEQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDL+L +LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGKELSVWEFVESGES
T GVIGKGKE VWE VESG +
Subjt: TVGVIGKGKELSVWEFVESGES
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| A0A5D3DL36 Ty1-copia retrotransposon protein | 9.2e-88 | 59.01 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQM DDKPVVEQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDL+L +LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGKELSVWEFVESGES
T GVIGKGKE VWE VESG +
Subjt: TVGVIGKGKELSVWEFVESGES
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| A0A5D3DSQ3 Ty1-copia retrotransposon protein | 1.2e-84 | 59.87 | Show/hide |
Query: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
T++VKK D EK+ DN TVRGHLLNHMSD MF+LFV Q +SAKDIW LE YGGDD+GRKKYVVGKWLQFQMTDDKPVVEQI+
Subjt: TNRVKKAFATDSEKHKNDNMTVRGHLLNHMSDLMFNLFVTQESAKESAKDIWCILEPHYGGDDSGRKKYVVGKWLQFQMTDDKPVVEQIN----------
Query: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
NDY+NHLKHKKKDLKLQ+LISHMRTEEAN+LKDKLAS+N+NSVNANLVESS VNRD++K +K G+ SE
Subjt: -----------------------NDYQNHLKHKKKDLKLQDLISHMRTEEANKLKDKLASKNVNSVNANLVESSSVNRDKSKHDKRQNGRTSE-------
Query: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
KGR +QKPTPQANLAEQD E+IAA+VE NLI+NKTDWIL+T ASRHFCTN+ELLHDY+D ADGE VFM NS
Subjt: ---------------------------KGRSNNQKPTPQANLAEQDDEVIAAVVEVNLIKNKTDWILETEASRHFCTNQELLHDYKDIADGEYVFMENSV
Query: TVGVIGKGK
T GVIGKGK
Subjt: TVGVIGKGK
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