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CSPI03G23590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G23590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionF5J5.1
Genome locationChr3:20560725..20560958
RNA-Seq ExpressionCSPI03G23590
SyntenyCSPI03G23590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037092.1 F5J5.1 [Cucumis melo var. makuwa]9.3e-0435.29Show/hide
Query:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNH-HTSIIGEVQSRIMIRKNERLDYVKMIDNVC
        ++D +++N  D  +  +    T    + P  H+QNNH  +SIIG+  +RI  RK +++DY KMI ++C
Subjt:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNH-HTSIIGEVQSRIMIRKNERLDYVKMIDNVC

TrEMBL top hitse value%identityAlignment
A0A5A7ST13 Gag-pol polyprotein7.7e-0443.28Show/hide
Query:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNHHT-SIIGEVQSRIMIRKNERLDYVKMIDNV
        S+D  + N +D F+DV  + S+  + +    HI  NH + SIIGE+ S I   K  R DYVKMI NV
Subjt:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNHHT-SIIGEVQSRIMIRKNERLDYVKMIDNV

A0A5A7T0W9 F5J5.14.5e-0435.29Show/hide
Query:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNH-HTSIIGEVQSRIMIRKNERLDYVKMIDNVC
        ++D +++N  D  +  +    T    + P  H+QNNH  +SIIG+  +RI  RK +++DY KMI ++C
Subjt:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNH-HTSIIGEVQSRIMIRKNERLDYVKMIDNVC

A0A5A7VIH3 Putative mitochondrial protein5.9e-0437.66Show/hide
Query:  SADGMDIELSVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNHHTS-IIGEVQSRIMIRKNERLDYVKMIDNVC
        S+ G     S     D  +D   +  LS S  N+ + P  H++ NH +S II E+ + I  RK ER DY KM+ NVC
Subjt:  SADGMDIELSVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNHHTS-IIGEVQSRIMIRKNERLDYVKMIDNVC

A0A5D3E708 Gag-pol polyprotein7.7e-0443.28Show/hide
Query:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNHHT-SIIGEVQSRIMIRKNERLDYVKMIDNV
        S+D  + N +D F+DV  + S+  + +    HI  NH + SIIGE+ S I   K  R DYVKMI NV
Subjt:  SVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNHHT-SIIGEVQSRIMIRKNERLDYVKMIDNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAGATGGGATGGATATAGAGCTCTCAGTGGATCCATCAATTGATAACGTAAAGGATATCTTCAGGGACGTTAGGCTTTCTCCTTCTACAACTAATCGAGCTAT
GACCCCTTTTGGTCATATTCAAAATAACCATCATACTAGTATTATTGGAGAAGTGCAAAGCAGGATTATGATTCGTAAGAACGAACGCCTAGATTATGTGAAGATGATTG
ACAATGTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAGATGGGATGGATATAGAGCTCTCAGTGGATCCATCAATTGATAACGTAAAGGATATCTTCAGGGACGTTAGGCTTTCTCCTTCTACAACTAATCGAGCTAT
GACCCCTTTTGGTCATATTCAAAATAACCATCATACTAGTATTATTGGAGAAGTGCAAAGCAGGATTATGATTCGTAAGAACGAACGCCTAGATTATGTGAAGATGATTG
ACAATGTTTGTTAA
Protein sequenceShow/hide protein sequence
MSADGMDIELSVDPSIDNVKDIFRDVRLSPSTTNRAMTPFGHIQNNHHTSIIGEVQSRIMIRKNERLDYVKMIDNVC