; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G23680 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G23680
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationChr3:20691359..20695007
RNA-Seq ExpressionCSPI03G23680
SyntenyCSPI03G23680
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007018 - Mediator complex, subunit Med6
IPR016820 - Mediator complex, subunit Med6, metazoa/plant
IPR038566 - Mediator complex, subunit Med6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149176.2 mediator of RNA polymerase II transcription subunit 6 [Cucumis sativus]1.3e-142100Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
        RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV

XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6 isoform X1 [Cucumis melo]2.5e-13898.04Show/hide
Query:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP TAPPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_022148297.1 mediator of RNA polymerase II transcription subunit 6 [Momordica charantia]2.4e-13394.88Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]4.7e-12992.91Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPP    PPG GNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAK TI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA  +E EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_038896808.1 mediator of RNA polymerase II transcription subunit 6 [Benincasa hispida]4.7e-13797.24Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPPTAPPG GNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENE EEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYAPA TAETEKGPEN  GESQQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C2 Mediator of RNA polymerase II transcription subunit 66.2e-143100Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
        RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV

A0A1S3BHR9 Mediator of RNA polymerase II transcription subunit 61.2e-13898.04Show/hide
Query:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP TAPPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 61.2e-13898.04Show/hide
Query:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP TAPPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 61.2e-13394.88Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 65.1e-12992.91Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
        MATPP    PPG GNFEGGP  AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA  +E EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 66.7e-8661.03Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSR +Y ISKAFT A+SKLE I                                     G+   
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---

Query:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
            +++NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPPFPEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 62.4e-2234.44Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G+EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP
         IYQAP L SV  +RV  A++ I  AF  A S        GY        E ++VKP     +E  +  + +RVD +L  L++K PP        E   P
Subjt:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP

Query:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK
            + E  P  +  +S++      + Q       P KRM+
Subjt:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 68.4e-2838.12Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G+EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAE
        YQAP+L  VF +RVS+++ ++S+AF + SS +      GY   +D  N+ E+ K  A      ++ KR+D ++ SL  K P    P   P+      T +
Subjt:  YQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAE

Query:  TE
         +
Subjt:  TE

Q7Q107 Mediator of RNA polymerase II transcription subunit 68.1e-2334.89Show/hide
Query:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ
        I + D  W+    L+   V DYF+   +PFYD TCNNE +RM+      L  L+ MTG+EY+   V +P L+V RKQ R  P + TPM  YYI+ G++YQ
Subjt:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ

Query:  APQLCSVFAARVSRALYYISKAFTTASS--------------KLEKIGYVDSENESEEVKPAK-ETINFKEVKRVDHILASLQRKLP-PAPPPPPFPEGY
        AP L SVF +R+   ++++  AF  ASS                 K     ++ ++++  P K E  +  + +RVD +L  L RK P P P     P G 
Subjt:  APQLCSVFAARVSRALYYISKAFTTASS--------------KLEKIGYVDSENESEEVKPAK-ETINFKEVKRVDHILASLQRKLP-PAPPPPPFPEGY

Query:  APAATAETEKGPENQQGESQQPSAD-PIIDQGPAK
         P+ TA          G+S    AD  +I Q P +
Subjt:  APAATAETEKGPENQQGESQQPSAD-PIIDQGPAK

Q921D4 Mediator of RNA polymerase II transcription subunit 61.3e-2336.1Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M GIEY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP
         IYQAP L SV  +RV  A++ I  AF  A S        GY        E E+VKP     +E  +  + +RVD +L  L++K PP        E   P
Subjt:  SIYQAPQLCSVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAP

Query:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK
           A+ E  P  +  +S++  +   I Q       P KRM+
Subjt:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related1.5e-9371.89Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSR +Y ISKAFT A+SKLE I  VD+EN++E  E KPA ET++ KE+KRVD IL SL RKL P
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP

Query:  APPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
         PPPPPFPEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  APPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related4.8e-8761.03Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSR +Y ISKAFT A+SKLE I                                     G+   
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---

Query:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
            +++NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPPFPEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCACCACCACCGACGGCTCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGCTGCCAGCAGCGCCTCAGCCTCCGGGCACGGACATGACTGGAATT
TGCTTTAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCTTGTCGCCTTTCTACGACTGGACTTGTAACAACGAA
CAACTCAGAATGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCATAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTT
TTCAGAAAGCAAAAAAGGGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTTCAATCTACCAGGCGCCTCAACTTTGCAGTGTTTTT
GCTGCTCGCGTTAGTCGGGCACTGTATTACATATCAAAGGCCTTTACCACTGCTTCGTCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGAGTGAA
GAAGTAAAACCTGCAAAAGAAACCATTAACTTTAAGGAAGTAAAGCGAGTTGATCATATTCTTGCATCTTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCA
CCATTTCCTGAAGGTTATGCTCCTGCTGCCACAGCAGAGACAGAAAAAGGCCCTGAAAATCAGCAAGGAGAGTCACAACAGCCTTCTGCAGATCCCATTATTGAT
CAGGGTCCAGCTAAAAGGATGAAATTTTCAAGTGTTTAG
mRNA sequenceShow/hide mRNA sequence
CACAATTGTTTGAAAAATAATGTTGTTATACAGTTTGATTGCTAAGACTGCTATCCATTGTGGTTGCAATACAAATTCATCTCCATACCGTGGAGGTTGATACGT
TTTTGTTACATGACTTCTCCCTCTTCACTCTCGGTCGTGATCGTCGGGAAACAAAGAAAAAGGGTGTAGTGCTTTCACTTACGGTGGAGGGATCTGTAAAATTCA
ACACTTCGTGGCCAGAAAAGTAAAATAGCGCACAAATGGCAACTCCACCACCACCGACGGCTCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGCTGCCAGCAG
CGCCTCAGCCTCCGGGCACGGACATGACTGGAATTTGCTTTAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCT
TGTCGCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAATGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCATAGAGTACA
TGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCAGAAAGCAAAAAAGGGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTT
CAATCTACCAGGCGCCTCAACTTTGCAGTGTTTTTGCTGCTCGCGTTAGTCGGGCACTGTATTACATATCAAAGGCCTTTACCACTGCTTCGTCAAAGTTGGAGA
AGATAGGATATGTTGATTCTGAAAATGAGAGTGAAGAAGTAAAACCTGCAAAAGAAACCATTAACTTTAAGGAAGTAAAGCGAGTTGATCATATTCTTGCATCTT
TACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATTTCCTGAAGGTTATGCTCCTGCTGCCACAGCAGAGACAGAAAAAGGCCCTGAAAATCAGCAAGGAG
AGTCACAACAGCCTTCTGCAGATCCCATTATTGATCAGGGTCCAGCTAAAAGGATGAAATTTTCAAGTGTTTAGGCTACCTTGCCTGTTGAGAAGCCTATTTAAT
CCTACAATTGAAATTCAACATGGATGACATCCCTGCACAAAGCATGGTGAGTTGTGAACACACACACACACACACACACACACACACCCCCAAAAAAAAAAAGAA
GAAGAAAAGAGGAAAAAGGTCAAAGAGTTGGAATCTGCCTTGTGAAAAGCCTGTAGTTATAGACTTAACTTGTGATAATCCATTGTTTTAGTAGTAACTTGTACT
ACACTACCATGTAACCATCACTTCCTGATTTTGTTAGCTAGAATTGTTTGATACTCATATGACATACCACTAGTTGCTGTGTCTTTGTATTGTGATAACTTGGGA
AGAAGGTTTTTAATATTGAACATGGTAATATAATTCTGCAATATCTTGGGC
Protein sequenceShow/hide protein sequence
MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFV
FRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPP
PFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKFSSV