| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026033.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.7e-133 | 55.69 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE--------------------------DDEVI
M+DPMFDLFV+QK KDI TLES Y GDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE D E+I
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE--------------------------DDEVI
Query: AAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIIL
AA++E NLIENKT WILDTGASRHF TNR+L +DYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV SLLN LKI+L
Subjt: AAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIIL
Query: DGDKVVLTKNGEFVG-------------------------------------------------------------------------------------
+GDKVVLTKNG+FVG
Subjt: DGDKVVLTKNGEFVG-------------------------------------------------------------------------------------
Query: ---FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLKSLSVSCQSE
P + K PYELWKG+ PN SY+KVWGCLAKVPF ALKK+TV SKTFDCIFIGYAQN+AAY
Subjt: ---FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLKSLSVSCQSE
Query: NMHDLNSPKDVSNIPEVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
MHD + VDT ++ +LE RRSKRQRTEKSFGPDFLSTFIVER DEIDCNFT+L+LIDEDPKTYQEAL+S++SSMWKEAIKSELDSL MN
Subjt: NMHDLNSPKDVSNIPEVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
Query: T
T
Subjt: T
|
|
| TYK05597.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 7.9e-128 | 41.1 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLF+IQK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
D E+IAA++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Subjt: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Query: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
LVS SLLN GLKI+L+GDKVVLTKNG+FVG
Subjt: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
P + K PYELWKG+ PN SY+KVWGCLAKVP PAL
Subjt: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
Query: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
KK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MHD P+ VS IP VDT ++ +LEPRRSKRQRTE
Subjt: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
Query: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
KSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++S MWKEAIKSELDSL MN T
Subjt: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
|
|
| TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.3e-134 | 44.37 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLFV+QK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ------------------------------------------------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMG
D ++IA ++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMG
Subjt: ------------------------------------------------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMG
Query: NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIILDGDKVVLTKNGEFVG--------------------------------
NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLN GLKI+L+GDKVVLTKNG+F+G
Subjt: NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIILDGDKVVLTKNGEFVG--------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: PTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMH
P + K PYELWKG+ PN SY+KVWGCLAKVP PALKK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MH
Subjt: PTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMH
Query: DLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
D P+ VS IP VDT ++ +LEPRRSKRQRTEKSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++S MWKEAIKSELDSL MN
Subjt: DLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
Query: T
T
Subjt: T
|
|
| TYK26791.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 7.9e-128 | 41.1 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLFV+QK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
D E+IAA++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Subjt: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Query: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
LVS SLLN GLKI+L+GDKVVLTKNG+FVG
Subjt: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
P + K PYELWKG+ PN SY+KVWGCLAKVP PAL
Subjt: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
Query: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
KK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MHD P+ VS IP VDT ++ +LEPRRSKRQRTE
Subjt: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
Query: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
KSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++S MWKEAIKSELDSL MN T
Subjt: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
|
|
| TYK27931.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 6.0e-128 | 41.1 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLFV+QK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLV NVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
D E+IAA++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Subjt: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Query: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
LVS SLLN GLKI+L+GDKVVLTKNG+FVG
Subjt: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
P + K PYELWKG+ PN SY+KVWGCLAKVP PAL
Subjt: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
Query: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
KK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MHD P+ VS IP VDT ++ +LEPRRSKRQRTE
Subjt: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
Query: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
KSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++SSMWKEAIKSELDSL MN T
Subjt: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SN16 Ty1-copia retrotransposon protein | 1.8e-133 | 55.69 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE--------------------------DDEVI
M+DPMFDLFV+QK KDI TLES Y GDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE D E+I
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE--------------------------DDEVI
Query: AAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIIL
AA++E NLIENKT WILDTGASRHF TNR+L +DYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLV SLLN LKI+L
Subjt: AAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIIL
Query: DGDKVVLTKNGEFVG-------------------------------------------------------------------------------------
+GDKVVLTKNG+FVG
Subjt: DGDKVVLTKNGEFVG-------------------------------------------------------------------------------------
Query: ---FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLKSLSVSCQSE
P + K PYELWKG+ PN SY+KVWGCLAKVPF ALKK+TV SKTFDCIFIGYAQN+AAY
Subjt: ---FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLKSLSVSCQSE
Query: NMHDLNSPKDVSNIPEVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
MHD + VDT ++ +LE RRSKRQRTEKSFGPDFLSTFIVER DEIDCNFT+L+LIDEDPKTYQEAL+S++SSMWKEAIKSELDSL MN
Subjt: NMHDLNSPKDVSNIPEVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
Query: T
T
Subjt: T
|
|
| A0A5D3C1A6 Ty1-copia retrotransposon protein | 3.8e-128 | 41.1 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLF+IQK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
D E+IAA++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Subjt: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Query: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
LVS SLLN GLKI+L+GDKVVLTKNG+FVG
Subjt: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
P + K PYELWKG+ PN SY+KVWGCLAKVP PAL
Subjt: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
Query: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
KK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MHD P+ VS IP VDT ++ +LEPRRSKRQRTE
Subjt: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
Query: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
KSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++S MWKEAIKSELDSL MN T
Subjt: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
|
|
| A0A5D3CM58 Ty1-copia retrotransposon protein | 2.1e-134 | 44.37 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLFV+QK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ------------------------------------------------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMG
D ++IA ++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMG
Subjt: ------------------------------------------------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMG
Query: NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIILDGDKVVLTKNGEFVG--------------------------------
NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS SLLN GLKI+L+GDKVVLTKNG+F+G
Subjt: NSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSRSLLNWTGLKIILDGDKVVLTKNGEFVG--------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------F
Subjt: ---------------------------------------------------------------------------------------------------F
Query: PTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMH
P + K PYELWKG+ PN SY+KVWGCLAKVP PALKK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MH
Subjt: PTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMH
Query: DLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
D P+ VS IP VDT ++ +LEPRRSKRQRTEKSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++S MWKEAIKSELDSL MN
Subjt: DLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTEKSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQ
Query: T
T
Subjt: T
|
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| A0A5D3DSQ3 Ty1-copia retrotransposon protein | 3.8e-128 | 41.1 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLFV+QK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLVANVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
D E+IAA++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Subjt: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Query: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
LVS SLLN GLKI+L+GDKVVLTKNG+FVG
Subjt: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
P + K PYELWKG+ PN SY+KVWGCLAKVP PAL
Subjt: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
Query: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
KK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MHD P+ VS IP VDT ++ +LEPRRSKRQRTE
Subjt: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
Query: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
KSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++S MWKEAIKSELDSL MN T
Subjt: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
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| A0A5D3DWC4 Ty1-copia retrotransposon protein | 2.9e-128 | 41.1 | Show/hide |
Query: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
M+DPMFDLFV+QK KDI TLES YGGDDAGRKKYV+ KWLQFQMTDDKPVVEQIHEYENLV NVLSE
Subjt: MTDPMFDLFVIQKYVKDILCTLESHYGGDDAGRKKYVMEKWLQFQMTDDKPVVEQIHEYENLVANVLSE-------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
D E+IAA++E NLIENKT WILDTGASRHF TNR+L HDYED ADGE VFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Subjt: -----------DDEVIAAVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRN
Query: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
LVS SLLN GLKI+L+GDKVVLTKNG+FVG
Subjt: LVSRSLLNWTGLKIILDGDKVVLTKNGEFVG---------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
P + K PYELWKG+ PN SY+KVWGCLAKVP PAL
Subjt: --------------------------------------------------------------FPTENWTKAPYELWKGYGPNFSYMKVWGCLAKVPFPAL
Query: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
KK+TVG KTFDCIFIGYAQN+AAY FMCLNDK+INE RDAEFFEHV PLK SL S MHD P+ VS IP VDT ++ +LEPRRSKRQRTE
Subjt: KKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLK-SLSVSCQSENMHDLNSPKDVSNIP---EVDTSSIRYDLEPRRSKRQRTE
Query: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
KSFGPDFLSTFIVER DEIDCNFT+LFLIDEDPKTYQEAL+S++SSMWKEAIKSELDSL MN T
Subjt: KSFGPDFLSTFIVERHDEIDCNFTSLFLIDEDPKTYQEALSSIESSMWKEAIKSELDSLTMNQT
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-07 | 34.65 | Show/hide |
Query: ENLVANVLSEDDEVIAAVME---VNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLR
+N A V + D+ V+ E ++L +++W++DT AS H RDLF Y D V MGN++ + + G G + +K G TL L +V +VP LR
Subjt: ENLVANVLSEDDEVIAAVME---VNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLR
Query: RNLVSRSLLNWTGLKIILDGDKVVLTK
NL+S L+ G + K LTK
Subjt: RNLVSRSLLNWTGLKIILDGDKVVLTK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.7e-04 | 30.14 | Show/hide |
Query: PYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFE
P +W ++S++KV+GC A P +++ + K+ CIFIGY Y K + RD F E
Subjt: PYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.4e-04 | 28.09 | Show/hide |
Query: NKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS-RSLLNWTGLKI
+ W+LD+GA+ H ++ + ++ G+ V + + +T + G L T + L+L N+LYVP++ +NL+S L N G+ +
Subjt: NKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS-RSLLNWTGLKI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.8e-03 | 23.17 | Show/hide |
Query: KAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLKS
++P++ G PN+ ++V+GC + + K+ C+F+GY+ +AY+ + L + R F E+ P +
Subjt: KAPYELWKGYGPNFSYMKVWGCLAKVPFPALKKSTVGSKTFDCIFIGYAQNNAAYMFMCLNDKSINEPRDAEFFEHVLPLKS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.1e-05 | 31.4 | Show/hide |
Query: AVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS
A + VN N W+LD+GA+ H ++ + ++ G+ V + + +T + G L TS ++L L+ VLYVP++ +NL+S
Subjt: AVMEVNLIENKTKWILDTGASRHFYTNRDLFHDYEDVADGEHVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS
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