; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G24300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G24300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr3:21373905..21374465
RNA-Seq ExpressionCSPI03G24300
SyntenyCSPI03G24300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658449.1 uncharacterized protein LOC105436008 [Cucumis sativus]4.4e-7679.7Show/hide
Query:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ
        MASVSQQ KENG MPI YPML PHNYT+WTIK E            EP RG EVDVKKDKKA  YILQCILEDVLLQI KKK+AKEIWD+ KTRYLGSE+
Subjt:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ

Query:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL
        V+M RV  LKSEFNV RMKETETIDEFA KIS LASKFTTLGVALEDSSLVKKLLDSVPDKYL IVT IEQFQDLETM FEE IGRMM YEERTT+L
Subjt:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL

XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]3.0e-8083.76Show/hide
Query:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ
        MAS+SQQ KENGGM ILY MLTPHNYTVWTIKAE            EPARGAEVDVKKDKKA +YILQCI EDVLLQI KKKTAKEIWDS KTRYLGSE+
Subjt:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ

Query:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL
        V+M RVQTLKSEF+V RMKETETIDEFA KISGLASKFTTLGVALEDSSLVKKLLDSVPDKYL IV  IEQFQDLETM FEEAIGRM AYEERTTRL
Subjt:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL

XP_031741713.1 uncharacterized protein LOC116403908 [Cucumis sativus]1.1e-7182.51Show/hide
Query:  MPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEF
        M ILYPMLTPHNYTVWTIKAE            EPARGAEVDVKKDKKA AYILQCI EDVLLQI KKKTAKEIWDS KTRYLGSE+V+M RVQTLKSEF
Subjt:  MPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEF

Query:  NVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTR
        NV RMKE ETIDEF  KISGLASKFTTL VALEDSSLV KLLDSVPDKYL IV  I+QFQDLETM FEEAIGRM AYEERTTR
Subjt:  NVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTR

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]2.3e-8083.76Show/hide
Query:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ
        M S SQQ KENGGMPILYPMLTPHNYTVWTIKAE            EPARGAEVDVKKDKKA AYILQCI EDVLLQI KKKTAKEIWDS KTRYLGSE+
Subjt:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ

Query:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL
        V+M RVQTLK EFNV RMKETE IDEFA KISGLASKFTTLGVAL+DSSLVKKLLDSVPDKYL IV  IEQFQDLETM FEEAIGRM AYEERTTRL
Subjt:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL

XP_042450925.1 uncharacterized protein LOC122035851 [Zingiber officinale]9.2e-6670.9Show/hide
Query:  KENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQT
        KENGG+   YPML PHNYTVW IK E            EPA GA+VD KKDKKA AYILQC+ ED+LLQI  KKTAKE+WDS KTRYLGS++V+  RVQT
Subjt:  KENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQT

Query:  LKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL
        LKSEF+  RMKETETIDEFA K+S L+SKF+TLG  LEDSSLVKKLLDSVPDK+  IV  IEQF DLETM FEEAIGR+ AYEERT RL
Subjt:  LKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL

TrEMBL top hitse value%identityAlignment
A0A5N6M0G6 Uncharacterized protein3.0e-4651.81Show/hide
Query:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ
        +A+ SQ  KE G + +  P LT  NYT W IK E            EP  GA VD +K+K A A+I Q I EDVL+Q+ KKKTA EIW+S K RY+G+++
Subjt:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ

Query:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER
        VQ  R+ TLK+EF + +MKE E+IDEFA K+S + +K+ +LG  LED  LV KLLDSVP+K+L +V  IEQ+ D+++M FEEAIGR+ AYE+R
Subjt:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER

A0A5N6MA89 Uncharacterized protein1.4e-4654.59Show/hide
Query:  KENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQT
        KE G + +  P LT  NYT W+IK E            E  +G  VD KK K A A++ Q I EDVLLQ+ KKKTAKE+W+S K RYLG+++VQ  R+ T
Subjt:  KENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQT

Query:  LKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER
        LKSEF+  RM+ETE+IDE+A K+S + SK ++LG  LEDS +V+KLLD+VPDKYL +V  IEQ  DL+TM FEEA+GR+ AYE+R
Subjt:  LKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER

A0A5N6NYJ8 CCHC-type domain-containing protein2.7e-4751.3Show/hide
Query:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ
        +A+ S   K+   + +  P LT  NYT W IK E            EP  GA VD KK+K + A+I Q I EDVLLQ+ KKKTAKEIWDS K RY+G+++
Subjt:  MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQ

Query:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER
        VQ  R+ TLK+EF + +MKE E++DEFA K++G+ +K+ +LG  ++D  LV+KLLDSVPDKYL +V  IEQ+ D++TM F+EAIGR+ AYE+R
Subjt:  VQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER

Q0JH75 Os01g0879800 protein1.2e-4754.97Show/hide
Query:  SVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQ
        S S+ ++E G + + YP+LT  NY+ W IK E            EPA    VD+KKDK+A A +   + EDVL QI KKKTAKE+W+S KTR+LG E+V+
Subjt:  SVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQ

Query:  MVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER
          RVQTLKS+F    MK+TE+IDEFA KISGLA+K + LGV ++D   VKKLLDSVPDK+L ++  IEQF DL++M F+EAIGR+ AYEER
Subjt:  MVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER

Q2QUP7 Laccase1.2e-4754.97Show/hide
Query:  SVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQ
        S S+ ++E G + + YP+LT  NY+ W IK E            EPA    VD+KKDK+A A +   + EDVL QI KKKTAKE+W+S KTR+LG E+V+
Subjt:  SVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQ

Query:  MVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER
          RVQTLKS+F    MK+TE+IDEFA KISGLA+K + LGV ++D   VKKLLDSVPDK+L ++  IEQF DL++M F+EAIGR+ AYEER
Subjt:  MVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCGTCTCGCAGCAAATAAAGGAGAATGGTGGAATGCCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGAGGAGCC
AGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGGGTGCATACATTCTCCAATGCATCCTGGAAGACGTGCTTCTACAAATCACAAAGAAGAAGACCGCAA
AGGAAATATGGGATAGTTTCAAGACAAGGTACTTGGGCAGTGAGCAGGTGCAGATGGTGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTTTTCGGATGAAGGAAACT
GAGACGATTGATGAGTTCGCAAGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTGAGGATTCATCATTGGTCAAAAAGCTCCTCGATTCCGT
CCCCGACAAATATCTTTCCATTGTCACCGAAATCGAGCAATTCCAAGATCTCGAAACCATGTCGTTTGAAGAAGCAATTGGACGAATGATGGCGTACGAGGAACGAACAA
CACGACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCGTCTCGCAGCAAATAAAGGAGAATGGTGGAATGCCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGAGGAGCC
AGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGGGTGCATACATTCTCCAATGCATCCTGGAAGACGTGCTTCTACAAATCACAAAGAAGAAGACCGCAA
AGGAAATATGGGATAGTTTCAAGACAAGGTACTTGGGCAGTGAGCAGGTGCAGATGGTGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTTTTCGGATGAAGGAAACT
GAGACGATTGATGAGTTCGCAAGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTGAGGATTCATCATTGGTCAAAAAGCTCCTCGATTCCGT
CCCCGACAAATATCTTTCCATTGTCACCGAAATCGAGCAATTCCAAGATCTCGAAACCATGTCGTTTGAAGAAGCAATTGGACGAATGATGGCGTACGAGGAACGAACAA
CACGACTCTGA
Protein sequenceShow/hide protein sequence
MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEEEPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKET
ETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL