| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.2e-184 | 53.26 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
M+DVLAKKH+S+A AK IMDSL+EMFGQP WSLRHEA+K+IYTKRMKEGTSVR+HVL MMMHF IAEVNGGPI+E NQVSFIL+SL KSF+PFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEK-----------------------
KIEFN+TTLLNELQ+FQ K+VEANVA TKR F +GSSSK+ GP KAQMK KG K P T+K K+ +K
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEK-----------------------
Query: -------------------VEYDTSTWILDSGATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE--------------------------------
VE D STWILDSGATNHICFSFQE+ SWKKL E E TLKVG EVVS E
Subjt: -------------------VEYDTSTWILDSGATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE--------------------------------
Query: ---------------------------------------------------------------------------------------------PLEDNSL
LEDNSL
Subjt: ---------------------------------------------------------------------------------------------PLEDNSL
Query: SPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGE
PCE SFT K LRAKVPLELVHSDLCGPMNVKAR GYEYFISFID +SRYGHVYL+HHKS+S EKFKEYKA+VENE+GKTIK LRSDRGGE
Subjt: SPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGE
Query: YVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWN--
Y+D +FQDYLIE GIQ QLSAPSTPQQNGVSERR+RTLLDMV SMMS+AQLPDSFWGYALET+ H+++ + P E R + R W
Subjt: YVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWN--
Query: ---IIRN-----------YTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQELRE
+++N +SRGGLF +PQ+NKVFVSTNATFLEE H +N+QPRSK+VL E+ NAT+ PSSSTKVVDK S QSH QELR
Subjt: ---IIRN-----------YTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQELRE
Query: SQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
+ SGRVVHQ +RYLGL ETQ++IPDDG+EDPLTYK
Subjt: SQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
|
|
| KAA0040307.1 gag/pol protein [Cucumis melo var. makuwa] | 7.3e-140 | 62.69 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
MSDVLAKKHESLA AKEIMDSLK MFGQP+W LRHEA+KYIYTKRMKEGTSVR+HVL MMMHF IAEVN G I+E NQVSFILESL KSFIPFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE-----------YDTSTWILDS
KIEFN+TTLLNELQ+FQ K+VE NVATTK F +GSSSKS SGP KP +++ KG KTPK NKGK+ EK + + ++
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE-----------YDTSTWILDS
Query: GATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE-------------------------------PLEDNSLSPCE----------SFTEKCLRAKV
A + E+ SWK+L E E TLKVG E+VS + LEDNSL PC+ SFT K L+AK
Subjt: GATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE-------------------------------PLEDNSLSPCE----------SFTEKCLRAKV
Query: PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTP
PLEL+HS+LC PMNVKAR GYEYFI+FID YSRYGHVYL+ +KSDS EKFKEYKA+VENE GK IK LRSDRGGEY+DLRFQDYLIE+GIQ QLSAPSTP
Subjt: PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTP
Query: QQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALET-------------SKHLMSFGKGV
Q NGVSERR+RTLLDMV SMMSFAQLPDSFWGYALET S+ LMS+GKG+
Subjt: QQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALET-------------SKHLMSFGKGV
|
|
| KAA0054875.1 gag/pol protein [Cucumis melo var. makuwa] | 5.6e-156 | 60.22 | Show/hide |
Query: MKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLNKIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSK
M EGTSVR+HVL MMMHF IAEVNGG I+E NQVSFILESL KSFIPFQTNVSLNKIEFN+TTLLNELQ+FQ K+VEANVATTKR FS+G+SSK
Subjt: MKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLNKIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSK
Query: STSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE----YDTSTWILD---------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS--------
S +GP KP +++ KG KTPK NK K+ TEK + + W+ + + + E+ SWK+L E E TL+VG E+VS
Subjt: STSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE----YDTSTWILD---------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS--------
Query: ---------VEPLEDNSLSPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKV
+ LEDNSL PC+ SFT K L AK LELVHSDLCGPMNVKAR GYEYFISFID Y+RYGHVYL+ +KSDS EKFKEYKA+V
Subjt: ---------VEPLEDNSLSPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKV
Query: ENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEF
ENE GKTIK RSDRGGEY+DLRFQDYLIE+ IQ QLSAPSTPQQNGVSERR++TLLDMV SMMSF QLPDSF GYALE + ++++ P E
Subjt: ENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEF
Query: GDARHMCWYKILRNWNIIRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQEL
W ++Y +S+GGLF +PQ+NK F+S ATFLEE HI+N+Q RSKLV EIS N T+ PSSSTKVVDKT K GQ+H QEL
Subjt: GDARHMCWYKILRNWNIIRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQEL
Query: RESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
E +HSGRVV Q DRYLGL+E Q+VIPDDGIEDPLTYK
Subjt: RESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
|
|
| KAA0061924.1 gag/pol protein [Cucumis melo var. makuwa] | 9.3e-135 | 53.01 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
M+DVLAKKHESLA AKEI+D+LK MFGQ +W LRHEA+KYIYTKRMKEGT VR+HVL MMMH I EVNGG I+E NQVSFILESL KSFIPFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEYDTSTWILDSGATNHICFSFQ
KIEFN+T LLNELQ+FQT KQVEANVATTK FS+GSSSK+ +GP KPK Q+K KG KTPK NKGK+A EK + C+
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEYDTSTWILDSGATNHICFSFQ
Query: ESCSW-----KKLVEHETTLKVGMREVVSVEPLEDNSLSPCESFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSL
++ W K LVE + + + S SFT K LRAK+P+ELVHS LCGPMNVKAR G
Subjt: ESCSW-----KKLVEHETTLKVGMREVVSVEPLEDNSLSPCESFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSL
Query: EKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETS---------
TP+QNGVSERR+RTLLDMV SMMSFAQLPDSFWGYALET+
Subjt: EKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETS---------
Query: ----KHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWNI---IRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNA
KHLMS+GKGVK+VY+ LEF D RH CWYK L+NWNI + Y KVFVSTN +FLEE HI+++QP SKLVL+EIS +A
Subjt: ----KHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWNI---IRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNA
Query: TNIPSSSTKVVDKTWKSGQSHPFQELRESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
++ PSSSTKVVDK+ S Q+HP QELRE + SGRVVHQ +RYLGL+ET +VIPDDGIED LTYK
Subjt: TNIPSSSTKVVDKTWKSGQSHPFQELRESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
|
|
| KAA0063246.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-139 | 64 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
MSDVLAKKHESLA KEIMDSLK MFGQPKWSLRHEA+KYIYTKRMKE TSVR+HVL MMHF IAEVNGG I+E NQVSFILES KSFIPFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEY----DTSTWILD--------
KIEFN+TTLLNELQ+FQ K+VEANVA+TK F +GSSSKS + P K +++ KG KTPK KGK+ TEK + + W+ +
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEY----DTSTWILD--------
Query: ------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS-------------------------------VEPLEDNSLSPCE----------SFTE
GATNHICFSFQ++ SWK+L E E TLKVG E+VS + LEDNSL PC+ SFT
Subjt: ------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS-------------------------------VEPLEDNSLSPCE----------SFTE
Query: KCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQ
K LRAK PLELVHSD GPMNVKAR GY+YFISFID YSRY HVYL+ +KSDS EKFKEYKAKVENELGKTIK LRSDRG EY+DLRFQDYLIE IQ Q
Subjt: KCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQ
Query: LSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
LSAP+TPQQN VSERR+RTLLDMVHSMMSFAQLP+SFW YALET+ ++++
Subjt: LSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TFI0 Gag/pol protein | 3.5e-140 | 62.69 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
MSDVLAKKHESLA AKEIMDSLK MFGQP+W LRHEA+KYIYTKRMKEGTSVR+HVL MMMHF IAEVN G I+E NQVSFILESL KSFIPFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE-----------YDTSTWILDS
KIEFN+TTLLNELQ+FQ K+VE NVATTK F +GSSSKS SGP KP +++ KG KTPK NKGK+ EK + + ++
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE-----------YDTSTWILDS
Query: GATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE-------------------------------PLEDNSLSPCE----------SFTEKCLRAKV
A + E+ SWK+L E E TLKVG E+VS + LEDNSL PC+ SFT K L+AK
Subjt: GATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE-------------------------------PLEDNSLSPCE----------SFTEKCLRAKV
Query: PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTP
PLEL+HS+LC PMNVKAR GYEYFI+FID YSRYGHVYL+ +KSDS EKFKEYKA+VENE GK IK LRSDRGGEY+DLRFQDYLIE+GIQ QLSAPSTP
Subjt: PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTP
Query: QQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALET-------------SKHLMSFGKGV
Q NGVSERR+RTLLDMV SMMSFAQLPDSFWGYALET S+ LMS+GKG+
Subjt: QQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALET-------------SKHLMSFGKGV
|
|
| A0A5A7UMM9 Gag/pol protein | 2.7e-156 | 60.22 | Show/hide |
Query: MKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLNKIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSK
M EGTSVR+HVL MMMHF IAEVNGG I+E NQVSFILESL KSFIPFQTNVSLNKIEFN+TTLLNELQ+FQ K+VEANVATTKR FS+G+SSK
Subjt: MKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLNKIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSK
Query: STSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE----YDTSTWILD---------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS--------
S +GP KP +++ KG KTPK NK K+ TEK + + W+ + + + E+ SWK+L E E TL+VG E+VS
Subjt: STSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVE----YDTSTWILD---------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS--------
Query: ---------VEPLEDNSLSPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKV
+ LEDNSL PC+ SFT K L AK LELVHSDLCGPMNVKAR GYEYFISFID Y+RYGHVYL+ +KSDS EKFKEYKA+V
Subjt: ---------VEPLEDNSLSPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKV
Query: ENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEF
ENE GKTIK RSDRGGEY+DLRFQDYLIE+ IQ QLSAPSTPQQNGVSERR++TLLDMV SMMSF QLPDSF GYALE + ++++ P E
Subjt: ENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEF
Query: GDARHMCWYKILRNWNIIRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQEL
W ++Y +S+GGLF +PQ+NK F+S ATFLEE HI+N+Q RSKLV EIS N T+ PSSSTKVVDKT K GQ+H QEL
Subjt: GDARHMCWYKILRNWNIIRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQEL
Query: RESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
E +HSGRVV Q DRYLGL+E Q+VIPDDGIEDPLTYK
Subjt: RESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
|
|
| A0A5A7V9X9 Gag/pol protein | 6.0e-140 | 64 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
MSDVLAKKHESLA KEIMDSLK MFGQPKWSLRHEA+KYIYTKRMKE TSVR+HVL MMHF IAEVNGG I+E NQVSFILES KSFIPFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEY----DTSTWILD--------
KIEFN+TTLLNELQ+FQ K+VEANVA+TK F +GSSSKS + P K +++ KG KTPK KGK+ TEK + + W+ +
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEY----DTSTWILD--------
Query: ------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS-------------------------------VEPLEDNSLSPCE----------SFTE
GATNHICFSFQ++ SWK+L E E TLKVG E+VS + LEDNSL PC+ SFT
Subjt: ------SGATNHICFSFQESCSWKKLVEHETTLKVGMREVVS-------------------------------VEPLEDNSLSPCE----------SFTE
Query: KCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQ
K LRAK PLELVHSD GPMNVKAR GY+YFISFID YSRY HVYL+ +KSDS EKFKEYKAKVENELGKTIK LRSDRG EY+DLRFQDYLIE IQ Q
Subjt: KCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQ
Query: LSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
LSAP+TPQQN VSERR+RTLLDMVHSMMSFAQLP+SFW YALET+ ++++
Subjt: LSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
|
|
| A0A5D3DK93 Gag/pol protein | 4.5e-135 | 53.01 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
M+DVLAKKHESLA AKEI+D+LK MFGQ +W LRHEA+KYIYTKRMKEGT VR+HVL MMMH I EVNGG I+E NQVSFILESL KSFIPFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEYDTSTWILDSGATNHICFSFQ
KIEFN+T LLNELQ+FQT KQVEANVATTK FS+GSSSK+ +GP KPK Q+K KG KTPK NKGK+A EK + C+
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEKVEYDTSTWILDSGATNHICFSFQ
Query: ESCSW-----KKLVEHETTLKVGMREVVSVEPLEDNSLSPCESFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSL
++ W K LVE + + + S SFT K LRAK+P+ELVHS LCGPMNVKAR G
Subjt: ESCSW-----KKLVEHETTLKVGMREVVSVEPLEDNSLSPCESFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSL
Query: EKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETS---------
TP+QNGVSERR+RTLLDMV SMMSFAQLPDSFWGYALET+
Subjt: EKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETS---------
Query: ----KHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWNI---IRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNA
KHLMS+GKGVK+VY+ LEF D RH CWYK L+NWNI + Y KVFVSTN +FLEE HI+++QP SKLVL+EIS +A
Subjt: ----KHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWNI---IRNYTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNA
Query: TNIPSSSTKVVDKTWKSGQSHPFQELRESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
++ PSSSTKVVDK+ S Q+HP QELRE + SGRVVHQ +RYLGL+ET +VIPDDGIED LTYK
Subjt: TNIPSSSTKVVDKTWKSGQSHPFQELRESQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
|
|
| E2GK51 Gag/pol protein (Fragment) | 1.1e-184 | 53.26 | Show/hide |
Query: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
M+DVLAKKH+S+A AK IMDSL+EMFGQP WSLRHEA+K+IYTKRMKEGTSVR+HVL MMMHF IAEVNGGPI+E NQVSFIL+SL KSF+PFQTN SLN
Subjt: MSDVLAKKHESLAKAKEIMDSLKEMFGQPKWSLRHEAVKYIYTKRMKEGTSVRKHVLVMMMHFKIAEVNGGPIEEVNQVSFILESLLKSFIPFQTNVSLN
Query: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEK-----------------------
KIEFN+TTLLNELQ+FQ K+VEANVA TKR F +GSSSK+ GP KAQMK KG K P T+K K+ +K
Subjt: KIEFNVTTLLNELQKFQT-----RKQVEANVATTKRSFSKGSSSKSTSGPYKPKAQMKMKGTRKTPKTNKGKRATEK-----------------------
Query: -------------------VEYDTSTWILDSGATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE--------------------------------
VE D STWILDSGATNHICFSFQE+ SWKKL E E TLKVG EVVS E
Subjt: -------------------VEYDTSTWILDSGATNHICFSFQESCSWKKLVEHETTLKVGMREVVSVE--------------------------------
Query: ---------------------------------------------------------------------------------------------PLEDNSL
LEDNSL
Subjt: ---------------------------------------------------------------------------------------------PLEDNSL
Query: SPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGE
PCE SFT K LRAKVPLELVHSDLCGPMNVKAR GYEYFISFID +SRYGHVYL+HHKS+S EKFKEYKA+VENE+GKTIK LRSDRGGE
Subjt: SPCE----------SFTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGE
Query: YVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWN--
Y+D +FQDYLIE GIQ QLSAPSTPQQNGVSERR+RTLLDMV SMMS+AQLPDSFWGYALET+ H+++ + P E R + R W
Subjt: YVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEFGDARHMCWYKILRNWN--
Query: ---IIRN-----------YTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQELRE
+++N +SRGGLF +PQ+NKVFVSTNATFLEE H +N+QPRSK+VL E+ NAT+ PSSSTKVVDK S QSH QELR
Subjt: ---IIRN-----------YTYSLVTQSRGGLFCNPQDNKVFVSTNATFLEEGHIKNYQPRSKLVLSEISTNATNIPSSSTKVVDKTWKSGQSHPFQELRE
Query: SQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
+ SGRVVHQ +RYLGL ETQ++IPDDG+EDPLTYK
Subjt: SQHSGRVVHQLDRYLGLTETQLVIPDDGIEDPLTYK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.5e-23 | 33.16 | Show/hide |
Query: LKVGMREVVSVEPLEDNSLSPCESFTEKCLRAKV----------------PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKF
L++ + + S + L +N CE E CL K PL +VHSD+CGP+ YF+ F+D ++ Y YL+ +KSD F
Subjt: LKVGMREVVSVEPLEDNSLSPCESFTEKCLRAKV----------------PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKF
Query: KEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
+++ AK E + L D G EY+ + + ++ GI L+ P TPQ NGVSER RT+ + +M+S A+L SFWG A+ T+ +L++
Subjt: KEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.8e-31 | 42.31 | Show/hide |
Query: LELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQ
L+LV+SD+CGPM +++ G +YF++FID SR VY++ K + F+++ A VE E G+ +K LRSD GGEY F++Y +GI+ + + P TPQ
Subjt: LELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPSTPQ
Query: QNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEF
NGV+ER +RT+++ V SM+ A+LP SFWG A++T+ +L++ + +PL F
Subjt: QNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMSFGKGVKEVYIPLEF
|
|
| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 8.4e-14 | 30 | Show/hide |
Query: PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDS--LEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPS
P + +H+D+ GP++ + YFISF D +++ VY +H + + L+ F A ++N+ ++ +++ DRG EY + +L +NGI + +
Subjt: PLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDS--LEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGIQLQLSAPS
Query: TPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETS
+ +GV+ER +RTLLD + + + LP+ W A+E S
Subjt: TPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-17 | 31.37 | Show/hide |
Query: FTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGI
F++ + + PLE ++SD+ + + Y Y++ F+D ++RY +Y + KS E F +K +EN I SD GGE+V L +Y ++GI
Subjt: FTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGI
Query: QLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
S P TP+ NG+SER+ R +++ +++S A +P ++W YA + +L++
Subjt: QLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-19 | 34.64 | Show/hide |
Query: FTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGI
F+ + + PLE ++SD+ + + Y Y++ F+D ++RY +Y + KS + F +K+ VEN I L SD GGE+V LR DYL ++GI
Subjt: FTEKCLRAKVPLELVHSDLCGPMNVKARVGYEYFISFIDCYSRYGHVYLMHHKSDSLEKFKEYKAKVENELGKTIKILRSDRGGEYVDLRFQDYLIENGI
Query: QLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
S P TP+ NG+SER+ R +++M +++S A +P ++W YA + +L++
Subjt: QLQLSAPSTPQQNGVSERRSRTLLDMVHSMMSFAQLPDSFWGYALETSKHLMS
|
|
