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CSPI03G24580 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G24580
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTubulin glycylase
Genome locationChr3:21672287..21674517
RNA-Seq ExpressionCSPI03G24580
SyntenyCSPI03G24580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060329.1 uncharacterized protein E6C27_scaffold22G001140 [Cucumis melo var. makuwa]1.1e-6298.37Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYN KQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSIGGLDFEAEEQP E
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
XP_004149842.1 uncharacterized protein LOC101206322 isoform X1 [Cucumis sativus]2.5e-64100Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSIGGLDFEAEEQPGE
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
XP_008450156.1 PREDICTED: uncharacterized protein LOC103491830 [Cucumis melo]4.0e-6297.56Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVE KHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSIGGLDFEAEE P E
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
XP_031738373.1 uncharacterized protein LOC101206322 isoform X2 [Cucumis sativus]2.5e-64100Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSIGGLDFEAEEQPGE
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
XP_031738374.1 uncharacterized protein LOC101206322 isoform X3 [Cucumis sativus]1.9e-6499.19Show/hide
Query:  RELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQ
        +ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQ
Subjt:  RELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQ

Query:  DAVVNVGPMSIGGLDFEAEEQPGE
        DAVVNVGPMSIGGLDFEAEEQPGE
Subjt:  DAVVNVGPMSIGGLDFEAEEQPGE
TrEMBL top hitse value%identityAlignment
A0A0A0LAZ2 Uncharacterized protein1.2e-64100Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSIGGLDFEAEEQPGE
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
A0A1S3BN08 uncharacterized protein LOC1034918302.0e-6297.56Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVE KHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSIGGLDFEAEE P E
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
A0A5D3DF47 Uncharacterized protein5.1e-6398.37Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYN KQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSIGGLDFEAEEQP E
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
A0A6J1IS39 uncharacterized protein LOC111480016 isoform X21.5e-5993.5Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYNN QERTVVVE RGHDAARFHSIVHAHGWEEDVV MVEKKHGKN+IM+SFECQ LKSEKAAEDHIRQF+PKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSI GLDFEAEEQPGE
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
A0A6J1J065 uncharacterized protein LOC111480016 isoform X31.5e-5993.5Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        ELECERECSRGEDYRLIKLTITNYNN QERTVVVE RGHDAARFHSIVHAHGWEEDVV MVEKKHGKN+IM+SFECQ LKSEKAAEDHIRQF+PKLVGQD
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQPGE
        AVVNVGPMSI GLDFEAEEQPGE
Subjt:  AVVNVGPMSIGGLDFEAEEQPGE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29280.1 unknown protein9.3e-4970.83Show/hide
Query:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD
        EL CE ECSRGEDYRLIKLTI +YN K+E+TVVVEC+GHDAAR + + HAHGWEEDV+ +VE+KHGK ++ VSFEC+ LK+++AAEDHIRQFMPKL G D
Subjt:  ELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQD

Query:  AVVNVGPMSIGGLDFEAEEQ
        AV+N+GPM I GLDF A E+
Subjt:  AVVNVGPMSIGGLDFEAEEQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTTAGGGGCGCGAGGCGGGGCGGGGTGGGGTGTGAGAATGAGAGTTGAGTTCCTTAGGTCTTGTTTTTCAAAATGGTTCTTAGATCCGATGCCCAGAGAATT
GGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACTACAATAACAAGCAAGAACGAACTGTCGTCGTTGAATGTAGAGGCC
ATGATGCTGCACGGTTTCACAGCATTGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAGCATGGTTGAAAAAAAACACGGAAAGAACGAGATTATGGTTTCCTTCGAG
TGTCAGATGTTGAAGTCCGAAAAAGCAGCCGAAGATCACATCAGACAGTTTATGCCCAAATTAGTAGGGCAAGACGCTGTTGTTAACGTGGGGCCAATGAGCATCGGAGG
ATTGGATTTTGAAGCAGAGGAGCAGCCAGGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTTAGGGGCGCGAGGCGGGGCGGGGTGGGGTGTGAGAATGAGAGTTGAGTTCCTTAGGTCTTGTTTTTCAAAATGGTTCTTAGATCCGATGCCCAGAGAATT
GGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACTACAATAACAAGCAAGAACGAACTGTCGTCGTTGAATGTAGAGGCC
ATGATGCTGCACGGTTTCACAGCATTGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAGCATGGTTGAAAAAAAACACGGAAAGAACGAGATTATGGTTTCCTTCGAG
TGTCAGATGTTGAAGTCCGAAAAAGCAGCCGAAGATCACATCAGACAGTTTATGCCCAAATTAGTAGGGCAAGACGCTGTTGTTAACGTGGGGCCAATGAGCATCGGAGG
ATTGGATTTTGAAGCAGAGGAGCAGCCAGGAGAGTGA
Protein sequenceShow/hide protein sequence
MASLGARGGAGWGVRMRVEFLRSCFSKWFLDPMPRELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFE
CQMLKSEKAAEDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE