; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G24690 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G24690
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr3:21791036..21791536
RNA-Seq ExpressionCSPI03G24690
SyntenyCSPI03G24690
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022634.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3257.39Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT
        MADP IYDFLSQTT    ++NS     +  S+  +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA    T+EILHLG  SLQHS PPPPP 
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT

Query:  TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT----------SASPDTLSPTNSTDPALEHLNIDLTLRL
          T+HH   P         PS L   H FH NN    T          SASP+ LSP  + D A+EH+ IDLTLRL
Subjt:  TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT----------SASPDTLSPTNSTDPALEHLNIDLTLRL

KGN58096.1 hypothetical protein Csa_017649 [Cucumis sativus]2.4e-89100Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT
        MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT

Query:  TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL
        TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL
Subjt:  TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL

XP_022928226.1 protein LATE FLOWERING-like [Cucurbita moschata]2.0e-3260.82Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHS-PPPPPP
        MADP IYDFLSQTT    ++NS     +  S+  +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA    T+EILHLG  SLQHS PPPPPP
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHS-PPPPPP

Query:  TTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT----SASPDTLSPTNSTDPALEHLNIDLTLRL
        TT   +HH   P    L   PS L   H FH NN    T    SASP+ LSP  + D A+EH+ IDLTLRL
Subjt:  TTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT----SASPDTLSPTNSTDPALEHLNIDLTLRL

XP_022934585.1 protein LATE FLOWERING-like [Cucurbita moschata]2.4e-3357.69Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP
        MADP IYDFL+QTTTA     S + PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA A   +EILHLG       PPPPPP
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP

Query:  TTITHHHHHLPPHFY-------PLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL
        TT T HHH   P+         P P P  FL  H  F+ N++  NT        SASPD LSP  + D A+EH+ IDLTLRL
Subjt:  TTITHHHHHLPPHFY-------PLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL

XP_022983390.1 protein LATE FLOWERING-like [Cucurbita maxima]4.6e-3258.56Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP
        MADP IYDFL+QTTTA     S + PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA A   +EILHLG  SL     PP P
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP

Query:  TTITHHHHHLP------PHFYPLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL
        TT T  HHHLP      P   P P P  FL  H  F+ N++  NT        SASPD LSP  + D A+EH+ IDLTLRL
Subjt:  TTITHHHHHLP------PHFYPLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A0A0LDF1 C2H2-type domain-containing protein1.2e-89100Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT
        MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPT

Query:  TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL
        TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL
Subjt:  TITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like9.9e-3360.82Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHS-PPPPPP
        MADP IYDFLSQTT    ++NS     +  S+  +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA    T+EILHLG  SLQHS PPPPPP
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHS-PPPPPP

Query:  TTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT----SASPDTLSPTNSTDPALEHLNIDLTLRL
        TT   +HH   P    L   PS L   H FH NN    T    SASP+ LSP  + D A+EH+ IDLTLRL
Subjt:  TTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT----SASPDTLSPTNSTDPALEHLNIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like1.2e-3357.69Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP
        MADP IYDFL+QTTTA     S + PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA A   +EILHLG       PPPPPP
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP

Query:  TTITHHHHHLPPHFY-------PLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL
        TT T HHH   P+         P P P  FL  H  F+ N++  NT        SASPD LSP  + D A+EH+ IDLTLRL
Subjt:  TTITHHHHHLPPHFY-------PLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like2.2e-3258.56Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP
        MADP IYDFL+QTTTA     S + PKA+   +S +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA A   +EILHLG  SL     PP P
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKS-HSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPP

Query:  TTITHHHHHLP------PHFYPLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL
        TT T  HHHLP      P   P P P  FL  H  F+ N++  NT        SASPD LSP  + D A+EH+ IDLTLRL
Subjt:  TTITHHHHHLP------PHFYPLPTPPSFLDHHHSFHHNNFCPNT--------SASPDTLSPTNSTDPALEHLNIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like2.9e-3259.54Show/hide
Query:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHS-PPPPPP
        MADP IYDFLSQTT    ++NS     +  S+  +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRK   + T+EILHLG  SLQHS PPPPPP
Subjt:  MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHS-PPPPPP

Query:  TTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT------SASPDTLSPTNSTDPALEHLNIDLTLRL
        TT   +HH   P    L   PS L   H FH NN    T      SASP+ LSP  + D A+EH+ IDLTLRL
Subjt:  TTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNT------SASPDTLSPTNSTDPALEHLNIDLTLRL

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 89.0e-0731.4Show/hide
Query:  SQTTTAPPSNNSTTLPKAASSR--------------KSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPP
        S   +A PS++ TT     SS               K ++ +R F C YC R F TSQALGGHQNAHKRER  A R     + T  LH            
Subjt:  SQTTTAPPSNNSTTLPKAASSR--------------KSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPP

Query:  PPPTTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSA-------------SPDTLSPTNSTDPAL
               HH  H P H Y       FL++HH  H+ ++     +             S +TL+P +S  P +
Subjt:  PPPTTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSA-------------SPDTLSPTNSTDPAL

Q39261 Zinc finger protein 23.7e-0852.73Show/hide
Query:  PSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        PS+ S++   + +S     Q R+F C YC RKFY+SQALGGHQNAHK ER  A +
Subjt:  PSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR

Q39263 Zinc finger protein 41.3e-0850Show/hide
Query:  DFLSQTTTAPPSNNS-TTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        D  S + T P S+ S ++ P+    ++     R+F C YC RKFY+SQALGGHQNAHKRER  A R
Subjt:  DFLSQTTTAPPSNNS-TTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR

Q9FFX4 Zinc finger protein KNUCKLES4.3e-0938.89Show/hide
Query:  PPSNNSTTLP-KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTT-EILHLGCSSLQHSPPPPPPTTITHHH
        PPS      P K  SS K HS S        R+FPC YCPRKFYTSQALGGHQNAHKRERAAA R    L  +  IL    + L+     P P    +  
Subjt:  PPSNNSTTLP-KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTT-EILHLGCSSLQHSPPPPPPTTITHHH

Query:  HHLPPHFYPLPTPPSF--LDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL
                PL   P+   +D +  FH   +    + S +     N      E L++DL+LRL
Subjt:  HHLPPHFYPLPTPPSF--LDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL

Q9FKA9 Protein LATE FLOWERING2.5e-0952.46Show/hide
Query:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTTEILH
        +A  + ++ S  RIFPCL+C RKF++SQALGGHQNAHK+ER AA R   A   +   + LH
Subjt:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTTEILH

Arabidopsis top hitse value%identityAlignment
AT1G66140.1 zinc finger protein 48.9e-1050Show/hide
Query:  DFLSQTTTAPPSNNS-TTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        D  S + T P S+ S ++ P+    ++     R+F C YC RKFY+SQALGGHQNAHKRER  A R
Subjt:  DFLSQTTTAPPSNNS-TTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR

AT2G41940.1 zinc finger protein 86.4e-0831.4Show/hide
Query:  SQTTTAPPSNNSTTLPKAASSR--------------KSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPP
        S   +A PS++ TT     SS               K ++ +R F C YC R F TSQALGGHQNAHKRER  A R     + T  LH            
Subjt:  SQTTTAPPSNNSTTLPKAASSR--------------KSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPP

Query:  PPPTTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSA-------------SPDTLSPTNSTDPAL
               HH  H P H Y       FL++HH  H+ ++     +             S +TL+P +S  P +
Subjt:  PPPTTITHHHHHLPPHFYPLPTPPSFLDHHHSFHHNNFCPNTSA-------------SPDTLSPTNSTDPAL

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-1038.89Show/hide
Query:  PPSNNSTTLP-KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTT-EILHLGCSSLQHSPPPPPPTTITHHH
        PPS      P K  SS K HS S        R+FPC YCPRKFYTSQALGGHQNAHKRERAAA R    L  +  IL    + L+     P P    +  
Subjt:  PPSNNSTTLP-KAASSRKSHSQS--------RIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTT-EILHLGCSSLQHSPPPPPPTTITHHH

Query:  HHLPPHFYPLPTPPSF--LDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL
                PL   P+   +D +  FH   +    + S +     N      E L++DL+LRL
Subjt:  HHLPPHFYPLPTPPSF--LDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL

AT5G48890.1 C2H2-like zinc finger protein1.8e-1052.46Show/hide
Query:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTTEILH
        +A  + ++ S  RIFPCL+C RKF++SQALGGHQNAHK+ER AA R   A   +   + LH
Subjt:  KAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAA---LTTTEILH

AT5G57520.1 zinc finger protein 22.6e-0952.73Show/hide
Query:  PSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR
        PS+ S++   + +S     Q R+F C YC RKFY+SQALGGHQNAHK ER  A +
Subjt:  PSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACCCAACCATTTACGACTTCCTTAGCCAAACAACAACAGCACCTCCTTCAAATAATTCAACAACACTACCCAAAGCTGCTTCTTCAAGAAAATCACATTCTCA
ATCTCGCATTTTCCCATGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGACACCAAAATGCTCACAAGAGAGAAAGAGCCGCCGCCTCTCGTAAGG
CGGCAGCCCTCACTACCACTGAAATTCTTCATCTCGGTTGTTCCTCCCTTCAACACTCTCCTCCCCCACCCCCACCAACAACCATCACTCACCATCATCATCATCTCCCA
CCCCACTTCTATCCCCTTCCCACTCCACCTTCTTTTCTTGACCACCACCATTCCTTTCATCACAATAATTTCTGTCCTAACACCTCTGCCTCGCCCGACACTCTCTCTCC
CACCAACAGTACTGACCCCGCCCTTGAGCATCTAAACATCGATCTCACTCTTCGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACCCAACCATTTACGACTTCCTTAGCCAAACAACAACAGCACCTCCTTCAAATAATTCAACAACACTACCCAAAGCTGCTTCTTCAAGAAAATCACATTCTCA
ATCTCGCATTTTCCCATGCCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGCGGACACCAAAATGCTCACAAGAGAGAAAGAGCCGCCGCCTCTCGTAAGG
CGGCAGCCCTCACTACCACTGAAATTCTTCATCTCGGTTGTTCCTCCCTTCAACACTCTCCTCCCCCACCCCCACCAACAACCATCACTCACCATCATCATCATCTCCCA
CCCCACTTCTATCCCCTTCCCACTCCACCTTCTTTTCTTGACCACCACCATTCCTTTCATCACAATAATTTCTGTCCTAACACCTCTGCCTCGCCCGACACTCTCTCTCC
CACCAACAGTACTGACCCCGCCCTTGAGCATCTAAACATCGATCTCACTCTTCGCTTATAA
Protein sequenceShow/hide protein sequence
MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPTTITHHHHHLP
PHFYPLPTPPSFLDHHHSFHHNNFCPNTSASPDTLSPTNSTDPALEHLNIDLTLRL