; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G25000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G25000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAuxin-responsive protein
Genome locationChr3:22203104..22204215
RNA-Seq ExpressionCSPI03G25000
SyntenyCSPI03G25000
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650755.1 hypothetical protein Csa_023869, partial [Cucumis sativus]2.9e-2994.94Show/hide
Query:  KRGPGMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQEEEEEKGGGLRMIRRLRMEEEEEEEEEGGR
        ++G GMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQ EEEEKGGGLRMIRRLRMEEEEEEEEEGGR
Subjt:  KRGPGMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQEEEEEKGGGLRMIRRLRMEEEEEEEEEGGR

KAG6596989.1 Auxin-responsive protein IAA14, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1770.13Show/hide
Query:  CSGGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAK
        C G  G+G    +LKASGKRGFSETVDLKLN+QSKDGG       GVD+NENIKN+  NVDG+KSLCSKDPAKPP K
Subjt:  CSGGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAK

XP_008465181.1 PREDICTED: auxin-responsive protein IAA14-like [Cucumis melo]2.6e-3092.31Show/hide
Query:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        GGGG GGDQTSLK+SGKRGFSETVDLKLNLQSKDGGGG GVGVGVDLNEN+KNVSTNVDGEKSLCSKDPAKPPAK  V
Subjt:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

XP_011649168.1 auxin-responsive protein IAA14 [Cucumis sativus]4.8e-3297.44Show/hide
Query:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAK  V
Subjt:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

XP_038906921.1 auxin-responsive protein IAA14 [Benincasa hispida]1.4e-2383.54Show/hide
Query:  GGSGGDQT---SLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        GG GGDQT   +LKASGKRGFSETVDLKLN+QSKDG G  G GVGVDLNENIKNVSTNVDG+KSLCSKDPAKPPAK  V
Subjt:  GGSGGDQT---SLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

TrEMBL top hitse value%identityAlignment
A0A0A0LDH3 Uncharacterized protein1.2e-3398.8Show/hide
Query:  IGVDKRGPGMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQEEEEEKGGGLRMIRRLRMEEEEEEEEEGGR
        IGVDKRGPGMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQ EEEEKGGGLRMIRRLRMEEEEEEEEEGGR
Subjt:  IGVDKRGPGMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQEEEEEKGGGLRMIRRLRMEEEEEEEEEGGR

A0A0A0LIL5 Auxin-responsive protein2.3e-3297.44Show/hide
Query:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAK  V
Subjt:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

A0A1S3CNP5 Auxin-responsive protein1.3e-3092.31Show/hide
Query:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        GGGG GGDQTSLK+SGKRGFSETVDLKLNLQSKDGGGG GVGVGVDLNEN+KNVSTNVDGEKSLCSKDPAKPPAK  V
Subjt:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

A0A5D3E2Z7 Auxin-responsive protein1.3e-3092.31Show/hide
Query:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        GGGG GGDQTSLK+SGKRGFSETVDLKLNLQSKDGGGG GVGVGVDLNEN+KNVSTNVDGEKSLCSKDPAKPPAK  V
Subjt:  GGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

A0A6J1HP75 Auxin-responsive protein1.2e-1770.13Show/hide
Query:  CSGGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAK
        C G  G+G    +LKASGKRGFSETVDLKLN+QSKDGG       GVD+NENIKN+  NVDG+KSLCSKDPAKPP K
Subjt:  CSGGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAK

SwissProt top hitse value%identityAlignment
P93830 Auxin-responsive protein IAA171.4e-0544.74Show/hide
Query:  GGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        G  GGD  +     KRGFSETVDLKLNL ++                   +V T    EKS C KDPAKPPAK  V
Subjt:  GGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

Q38825 Auxin-responsive protein IAA79.7e-0444.57Show/hide
Query:  LFSLRLPTLPCSGGGGSGGDQTSLKAS--GKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        L +L+   L     GG+   ++  K++   KRGFSETVDL LNLQS   G        VDL    KNVS  V  EK+   KDP+KPPAK  V
Subjt:  LFSLRLPTLPCSGGGGSGGDQTSLKAS--GKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

Arabidopsis top hitse value%identityAlignment
AT1G04250.1 AUX/IAA transcriptional regulator family protein9.6e-0744.74Show/hide
Query:  GGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        G  GGD  +     KRGFSETVDLKLNL ++                   +V T    EKS C KDPAKPPAK  V
Subjt:  GGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

AT3G23050.1 indole-3-acetic acid 76.9e-0544.57Show/hide
Query:  LFSLRLPTLPCSGGGGSGGDQTSLKAS--GKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        L +L+   L     GG+   ++  K++   KRGFSETVDL LNLQS   G        VDL    KNVS  V  EK+   KDP+KPPAK  V
Subjt:  LFSLRLPTLPCSGGGGSGGDQTSLKAS--GKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

AT3G23050.2 indole-3-acetic acid 76.9e-0544.57Show/hide
Query:  LFSLRLPTLPCSGGGGSGGDQTSLKAS--GKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        L +L+   L     GG+   ++  K++   KRGFSETVDL LNLQS   G        VDL    KNVS  V  EK+   KDP+KPPAK  V
Subjt:  LFSLRLPTLPCSGGGGSGGDQTSLKAS--GKRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV

AT4G14550.1 indole-3-acetic acid inducible 141.2e-0448.15Show/hide
Query:  GGSGGDQT--SLKASG---KRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV
        G  GG +T  S   SG   KRGFSETVDLKLNLQS   G        VDLN       TN   ++    KDP+KPPAK  V
Subjt:  GGSGGDQT--SLKASG---KRGFSETVDLKLNLQSKDGGGGVGVGVGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTGGAACTCCGGATGGTTCCAGTTATTGTGCTGGTGCTGGTGCTGATGCTGATGCTGGTAGGGGTGCTGGTGAGGTGGCGGGGGCGGGGGCGGAAGAAGGGAAT
GGGAATGAATGTGCAGTTTGTTTGTCAGCGTTTGAGGATGGTGAAGAGATATGTGGCTTTATTCTCACTCCGATTGCCCACTCTGCCGTGCTCCGGTGGCGGTGGCAGTG
GCGGGGATCAGACCTCTCTTAAAGCTTCTGGCAAGAGGGGGTTCTCTGAAACTGTTGATCTCAAACTTAACCTTCAGAGCAAGGACGGTGGAGGAGGTGTCGGTGTCGGT
GTCGGGGTGGATCTCAATGAGAATATTAAGAATGTTTCGACGAACGTGGATGGTGAGAAGAGCCTCTGCTCCAAGGATCCTGCCAAGCCACCCGCCAAAATTGGGGTGGA
CAAAAGGGGGCCCGGGATGGTGATTGGGGTATTGAACATAGGGATCAAACTGGTGATTGAAATTGGGTCGTCGGTCGTCGGAAGGCCACGACGGTGCGGAGGAAGAAGGG
TGGTGCCTCTCCAGTTTTGCAGAAAAGGAATGGAACAAGAAGAAGAAGAAGAGAAAGGAGGGGGCCTGAGAATGATCAGGCGATTGAGGATGGAAGAGGAAGAGGAAGAG
GAAGAGGAAGGAGGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTGGAACTCCGGATGGTTCCAGTTATTGTGCTGGTGCTGGTGCTGATGCTGATGCTGGTAGGGGTGCTGGTGAGGTGGCGGGGGCGGGGGCGGAAGAAGGGAAT
GGGAATGAATGTGCAGTTTGTTTGTCAGCGTTTGAGGATGGTGAAGAGATATGTGGCTTTATTCTCACTCCGATTGCCCACTCTGCCGTGCTCCGGTGGCGGTGGCAGTG
GCGGGGATCAGACCTCTCTTAAAGCTTCTGGCAAGAGGGGGTTCTCTGAAACTGTTGATCTCAAACTTAACCTTCAGAGCAAGGACGGTGGAGGAGGTGTCGGTGTCGGT
GTCGGGGTGGATCTCAATGAGAATATTAAGAATGTTTCGACGAACGTGGATGGTGAGAAGAGCCTCTGCTCCAAGGATCCTGCCAAGCCACCCGCCAAAATTGGGGTGGA
CAAAAGGGGGCCCGGGATGGTGATTGGGGTATTGAACATAGGGATCAAACTGGTGATTGAAATTGGGTCGTCGGTCGTCGGAAGGCCACGACGGTGCGGAGGAAGAAGGG
TGGTGCCTCTCCAGTTTTGCAGAAAAGGAATGGAACAAGAAGAAGAAGAAGAGAAAGGAGGGGGCCTGAGAATGATCAGGCGATTGAGGATGGAAGAGGAAGAGGAAGAG
GAAGAGGAAGGAGGGAGATGAAAGAGAGATGAGCACTGAAAGTTGGGTGGGAGTTCCCGCACAGGATCACCATCTCGAAAAGACCCTTTATCCGTCTTCTCTTCTCTTCA
CTTTGTTTTTCTTTTCTTTTCTTTTCTTTTTAACAATTGTATATTCAAAATCAAATGAGGTTTATAAGCTTAATTATACATTGATTTCATCATCTTATATAAATTATACT
TTCTAACTCTTTCTTCCTTATTTCTAACCTTAATACCCCG
Protein sequenceShow/hide protein sequence
MIVELRMVPVIVLVLVLMLMLVGVLVRWRGRGRKKGMGMNVQFVCQRLRMVKRYVALFSLRLPTLPCSGGGGSGGDQTSLKASGKRGFSETVDLKLNLQSKDGGGGVGVG
VGVDLNENIKNVSTNVDGEKSLCSKDPAKPPAKIGVDKRGPGMVIGVLNIGIKLVIEIGSSVVGRPRRCGGRRVVPLQFCRKGMEQEEEEEKGGGLRMIRRLRMEEEEEE
EEEGGR