| GenBank top hits | e value | %identity | Alignment |
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| RVW14192.1 Copia protein [Vitis vinifera] | 1.8e-83 | 59.78 | Show/hide |
Query: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
G++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQ +LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKARL
Subjt: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
Query: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
VAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM LMDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWYN
Subjt: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
Query: RLSEYLLKE-----------------------------------------DVKRDIFRPQEDNEELLGSEM
RLSEYLLKE DVK+D FRP E +EELLG E+
Subjt: RLSEYLLKE-----------------------------------------DVKRDIFRPQEDNEELLGSEM
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| RVW26456.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.9e-83 | 71.43 | Show/hide |
Query: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
TG++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKAR
Subjt: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
Query: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
LVAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM LMDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWY
Subjt: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
Query: NRLSEYLLKE
NRLSEYLLKE
Subjt: NRLSEYLLKE
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| RVW57676.1 Copia protein [Vitis vinifera] | 4.7e-84 | 61.36 | Show/hide |
Query: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
TG++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKAR
Subjt: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
Query: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
LVAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM MDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSG MWY
Subjt: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
Query: NRLSEYLLKE---------------------------------DVKRDIFRPQEDNEELLGSEM
NRLSEYLLKE DVK+D FRP E +EELLG E+
Subjt: NRLSEYLLKE---------------------------------DVKRDIFRPQEDNEELLGSEM
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| RVW94544.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 8.9e-83 | 70.95 | Show/hide |
Query: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
TG++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKAR
Subjt: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
Query: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
LVAQGFSQR G+DYEETYS V+D IT R+LIS V E LDM LMDV+TTYLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWY
Subjt: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
Query: NRLSEYLLKE
NRLSEYLLKE
Subjt: NRLSEYLLKE
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| RVX04725.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 6.6e-86 | 66.26 | Show/hide |
Query: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
G++W++ ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKARL
Subjt: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
Query: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
VAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM LMDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWYN
Subjt: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
Query: RLSEYLLKE-------------DVKRDIFRPQEDNEELLGSEM
RLSEYLLKE DVK D FRP + +EELLG E+
Subjt: RLSEYLLKE-------------DVKRDIFRPQEDNEELLGSEM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438BTB5 Copia protein | 8.7e-84 | 59.78 | Show/hide |
Query: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
G++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQ +LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKARL
Subjt: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
Query: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
VAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM LMDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWYN
Subjt: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
Query: RLSEYLLKE-----------------------------------------DVKRDIFRPQEDNEELLGSEM
RLSEYLLKE DVK+D FRP E +EELLG E+
Subjt: RLSEYLLKE-----------------------------------------DVKRDIFRPQEDNEELLGSEM
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| A0A438FCH2 Copia protein | 2.3e-84 | 61.36 | Show/hide |
Query: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
TG++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKAR
Subjt: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
Query: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
LVAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM MDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSG MWY
Subjt: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
Query: NRLSEYLLKE---------------------------------DVKRDIFRPQEDNEELLGSEM
NRLSEYLLKE DVK+D FRP E +EELLG E+
Subjt: NRLSEYLLKE---------------------------------DVKRDIFRPQEDNEELLGSEM
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| A0A438HZK0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-83 | 71.43 | Show/hide |
Query: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
TG++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKAR
Subjt: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
Query: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
LVAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM LMDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWY
Subjt: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
Query: NRLSEYLLKE
NRLSEYLLKE
Subjt: NRLSEYLLKE
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| A0A438ID00 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-83 | 70.95 | Show/hide |
Query: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
TG++W+R ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKAR
Subjt: TGKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKAR
Query: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
LVAQGFSQR G+DYEETYS V+D IT R+LIS V E LDM LMDV+TTYLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWY
Subjt: LVAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWY
Query: NRLSEYLLKE
NRLSEYLLKE
Subjt: NRLSEYLLKE
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| A0A438J6Z0 Retrovirus-related Pol polyprotein from transposon RE1 | 3.2e-86 | 66.26 | Show/hide |
Query: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
G++W++ ++V++NIF + VA +I +ED EP++VEEC +R DWPKWKE IQA+LNSL+KREV GPVV TP+ VKP+G+KWVFV KRNENNE+ RYKARL
Subjt: GKRWNRTDVVVDNIFVYNVAHNITHENEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARL
Query: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
VAQGFSQR GIDYEETYS V+D IT R+LISL V E LDM LMDV+T YLYG ++N+IYMKIPEGFK+ ++ N+K R +YSIKLQRSLYGLKQSGRMWYN
Subjt: VAQGFSQRRGIDYEETYSHVVDVITLRYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYN
Query: RLSEYLLKE-------------DVKRDIFRPQEDNEELLGSEM
RLSEYLLKE DVK D FRP + +EELLG E+
Subjt: RLSEYLLKE-------------DVKRDIFRPQEDNEELLGSEM
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 6.7e-25 | 39.33 | Show/hide |
Query: PKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRYLIS
P S +E R D W+E I +LN+ K + P+ + +WVF K NE RYKARLVA+GF+Q+ IDYEET++ V + + R+++S
Subjt: PKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRYLIS
Query: LTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYLLKE
L + L +H MDV T +L G L+ EIYM++P+G S NS + KL +++YGLKQ+ R W+ + E LKE
Subjt: LTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYLLKE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-28 | 37.22 | Show/hide |
Query: NEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITL
++D EP+S++E + + + + +Q ++ SL K +V PKG +P+ KWVF K++ + ++ RYKARLV +GF Q++GID++E +S VV + ++
Subjt: NEDSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITL
Query: RYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYL
R ++SL L++ +DV T +L+G LE EIYM+ PEGF++ ++ KL +SLYGLKQ+ R WY + ++
Subjt: RYLISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYL
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.3e-09 | 40 | Show/hide |
Query: EPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRYLI
EPKSV KD P W + +Q +L++LS+ + +V P +G KWVF K + + + R KARLVA+GF Q GI + ETYS VV T+R +
Subjt: EPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRYLI
Query: SLTVCEKLDM
L V ++L++
Subjt: SLTVCEKLDM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.7e-24 | 35.2 | Show/hide |
Query: DSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRY
+SEP++ + KD +W+ + +++N+ V P V +G +W+F K N + + RYKARLVA+G++QR G+DY ET+S V+ ++R
Subjt: DSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRY
Query: LISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYLL
++ + V + +DV +L G L +++YM P GF K R Y KL+++LYGLKQ+ R WY L YLL
Subjt: LISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYLL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-23 | 34.64 | Show/hide |
Query: DSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRY
+SEP++ + KD +W++ + +++N+ V P V +G +W+F K N + + RYKARLVA+G++QR G+DY ET+S V+ ++R
Subjt: DSEPKSVEECCNRKDWPKWKEVIQAKLNSLSKREVCGPVVHTPKGVKPMGFKWVFVHKRNENNEVTRYKARLVAQGFSQRRGIDYEETYSHVVDVITLRY
Query: LISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYLL
++ + V + +DV +L G L +E+YM P GF K R Y +L++++YGLKQ+ R WY L YLL
Subjt: LISLTVCEKLDMHLMDVVTTYLYGFLENEIYMKIPEGFKILESYNSKSRELYSIKLQRSLYGLKQSGRMWYNRLSEYLL
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