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CSPI03G25380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G25380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCACTA en-spm transposon protein
Genome locationChr3:22689827..22690282
RNA-Seq ExpressionCSPI03G25380
SyntenyCSPI03G25380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033996.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.9e-3463.56Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISPHVVRFS  +GVCVR TF + CLKWA +  EY+ER FVLDF DQA+N+FVEHQMLT+ KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNSLKD
         E+AR N  + LV   +D
Subjt:  LEQARVNSSSKLVNSLKD

KAA0050574.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.9e-3361.6Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVE-------RYFVLDFIDQALNKFVEHQMLTSLKEFRGERHR
        +ELER+   NG+IP+TIA GAE PISPHVVRFS  +GVCVR TFS+ CLKWA +  EY+E       R FVLDF DQA+N+FVEHQMLT+ KEFR + HR
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVE-------RYFVLDFIDQALNKFVEHQMLTSLKEFRGERHR

Query:  HLKKYSNLEQARVNSSSKLVNSLKD
        H KKYS+LE+AR N  + LV   +D
Subjt:  HLKKYSNLEQARVNSSSKLVNSLKD

KAA0053293.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.9e-3362.61Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISP++VRFS  +GVCVR TF +CCLKWA +  EY+ER FVLDF DQA+N+FVEHQ+LT+ KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNS
         E+AR N  + L  S
Subjt:  LEQARVNSSSKLVNS

KAA0062643.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.9e-3462.71Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISPH VRFS  +GVCVR  F ICCLKWA +  EY+ER+FVLDF DQA+NKFVEHQM+ + KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNSLKD
         E+AR N  + LV   +D
Subjt:  LEQARVNSSSKLVNSLKD

TYK01177.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.2e-3463.56Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISPH VRFS  +GVCVR TF ICCLKWA +  EY+ER+FVLDF DQA+NKFVEHQM+ + KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNSLKD
         E+AR N  + LV   +D
Subjt:  LEQARVNSSSKLVNSLKD

TrEMBL top hitse value%identityAlignment
A0A5A7SVK7 CACTA en-spm transposon protein2.9e-3463.56Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISPHVVRFS  +GVCVR TF + CLKWA +  EY+ER FVLDF DQA+N+FVEHQMLT+ KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNSLKD
         E+AR N  + LV   +D
Subjt:  LEQARVNSSSKLVNSLKD

A0A5A7U5R2 CACTA en-spm transposon protein1.4e-3361.6Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVE-------RYFVLDFIDQALNKFVEHQMLTSLKEFRGERHR
        +ELER+   NG+IP+TIA GAE PISPHVVRFS  +GVCVR TFS+ CLKWA +  EY+E       R FVLDF DQA+N+FVEHQMLT+ KEFR + HR
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVE-------RYFVLDFIDQALNKFVEHQMLTSLKEFRGERHR

Query:  HLKKYSNLEQARVNSSSKLVNSLKD
        H KKYS+LE+AR N  + LV   +D
Subjt:  HLKKYSNLEQARVNSSSKLVNSLKD

A0A5A7UBN3 CACTA en-spm transposon protein1.4e-3362.61Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISP++VRFS  +GVCVR TF +CCLKWA +  EY+ER FVLDF DQA+N+FVEHQ+LT+ KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNS
         E+AR N  + L  S
Subjt:  LEQARVNSSSKLVNS

A0A5A7V3Q4 CACTA en-spm transposon protein2.9e-3462.71Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISPH VRFS  +GVCVR  F ICCLKWA +  EY+ER+FVLDF DQA+NKFVEHQM+ + KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNSLKD
         E+AR N  + LV   +D
Subjt:  LEQARVNSSSKLVNSLKD

A0A5D3BPD6 CACTA en-spm transposon protein5.8e-3563.56Show/hide
Query:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN
        +ELER+   NG+IP+TIA GAE PISPH VRFS  +GVCVR TF ICCLKWA +  EY+ER+FVLDF DQA+NKFVEHQM+ + KEFR + HRH KKYS+
Subjt:  MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSN

Query:  LEQARVNSSSKLVNSLKD
         E+AR N  + LV   +D
Subjt:  LEQARVNSSSKLVNSLKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTAGAGAGATACGCCAATAAGAATGGAAAGATTCCAATCACCATCGCCCTAGGAGCAGAGATGCCAATCTCTCCACATGTTGTTCGGTTCAGTAACATCGTTGG
TGTATGTGTGAGAGCTACATTTTCAATATGTTGCCTTAAGTGGGCTGGTATTCTGCCAGAGTACGTCGAGCGTTATTTCGTGCTTGATTTTATAGATCAAGCACTTAATA
AATTTGTTGAGCATCAAATGCTCACATCTTTGAAAGAGTTCAGGGGAGAGCGCCATAGACATTTAAAAAAGTACAGCAACCTTGAACAAGCACGTGTCAACTCATCGTCC
AAATTGGTGAATAGTCTGAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTAGAGAGATACGCCAATAAGAATGGAAAGATTCCAATCACCATCGCCCTAGGAGCAGAGATGCCAATCTCTCCACATGTTGTTCGGTTCAGTAACATCGTTGG
TGTATGTGTGAGAGCTACATTTTCAATATGTTGCCTTAAGTGGGCTGGTATTCTGCCAGAGTACGTCGAGCGTTATTTCGTGCTTGATTTTATAGATCAAGCACTTAATA
AATTTGTTGAGCATCAAATGCTCACATCTTTGAAAGAGTTCAGGGGAGAGCGCCATAGACATTTAAAAAAGTACAGCAACCTTGAACAAGCACGTGTCAACTCATCGTCC
AAATTGGTGAATAGTCTGAAAGATTGA
Protein sequenceShow/hide protein sequence
MELERYANKNGKIPITIALGAEMPISPHVVRFSNIVGVCVRATFSICCLKWAGILPEYVERYFVLDFIDQALNKFVEHQMLTSLKEFRGERHRHLKKYSNLEQARVNSSS
KLVNSLKD