; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G25850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G25850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGBBH-like_N domain-containing protein
Genome locationChr3:23183104..23185717
RNA-Seq ExpressionCSPI03G25850
SyntenyCSPI03G25850
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR010376 - Gamma-butyrobetaine hydroxylase-like, N-terminal
IPR038492 - GBBH-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650784.1 hypothetical protein Csa_017608 [Cucumis sativus]1.1e-5399.07Show/hide
Query:  FQVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGL
        F VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGL
Subjt:  FQVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGL

Query:  SRDPPKRK
        SRDPPKRK
Subjt:  SRDPPKRK

KAG7017806.1 hypothetical protein SDJN02_19672 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-5297.17Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGSVFNLSAEFLRVYSPAADAK+RSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYF+HLGSNKFT LRNYVKTLKKHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPPKRK
Subjt:  DPPKRK

XP_022935010.1 uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]2.7e-5297.17Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGSVFNLSAEFLRVYSPAADAK+RSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYF+HLGSNKFT LRNYVKTLKKHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPPKRK
Subjt:  DPPKRK

XP_022984013.1 uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]2.7e-5297.17Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGSVFNLSAEFLRVYSPAADAK+RSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYF+HLGSNKFT LRNYVKTLKKHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPPKRK
Subjt:  DPPKRK

XP_031737737.1 uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus]3.1e-53100Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPPKRK
Subjt:  DPPKRK

TrEMBL top hitse value%identityAlignment
A0A0A0LB75 GBBH-like_N domain-containing protein8.9e-5499.07Show/hide
Query:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS
        +VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS
Subjt:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS

Query:  RDPPKRK
        RDPPKRK
Subjt:  RDPPKRK

A0A1S3BNF3 uncharacterized protein LOC103491759 isoform X12.9e-5296.23Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGSVFNLSAEFLR+YSPAADAK+RSIGGEKVI GRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYF+HLGSNKFTLLRNYVKTLKKHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPPKRK
Subjt:  DPPKRK

A0A6J1DIS9 uncharacterized protein LOC111021468 isoform X11.2e-5091.51Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGS+FNLSAEFLR+YSPA DAK+RSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLH+TGIYSWDYF+HLGSNKFTLLRNYV+TL+KHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPP+RK
Subjt:  DPPKRK

A0A6J1F9C8 uncharacterized protein LOC111442002 isoform X11.3e-5297.17Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGSVFNLSAEFLRVYSPAADAK+RSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYF+HLGSNKFT LRNYVKTLKKHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPPKRK
Subjt:  DPPKRK

A0A6J1J9C4 uncharacterized protein LOC111482460 isoform X11.3e-5297.17Show/hide
Query:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR
        VEVKFADGSVFNLSAEFLRVYSPAADAK+RSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYF+HLGSNKFT LRNYVKTLKKHGLSR
Subjt:  VEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSR

Query:  DPPKRK
        DPPKRK
Subjt:  DPPKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27340.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).1.4e-4678.85Show/hide
Query:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS
        QVEV++ADG+ FN S+EFLR++SPAAD K+RSIGGEKVISGRR+VGIMSAEPVGNYGVR++FDDLHRTGIY WDYF+ LGSNKF L+RNY+KTL+KH LS
Subjt:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS

Query:  RDPP
        R+PP
Subjt:  RDPP

AT3G27340.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).3.6e-2381.67Show/hide
Query:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRI
        QVEV++ADG+ FN S+EFLR++SPAAD K+RSIGGEKVISGRR+VGIMSAEPVGNYGVRI
Subjt:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRI

AT3G27340.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).7.3e-4073.08Show/hide
Query:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS
        QVEV++ADG+ FN S+EFLR++SPAAD K+RSIGGEKVISGRR+VGIMSAEPVGNYGV        RTGIY WDYF+ LGSNKF L+RNY+KTL+KH LS
Subjt:  QVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS

Query:  RDPP
        R+PP
Subjt:  RDPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCACTTTCAGGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAGTTCTTGAGAGTATATAGTCCAGCTGCTGATGCTAAAATCCGGTCAAT
TGGGGGTGAAAAGGTAATCTCTGGACGACGTCATGTAGGTATTATGTCTGCTGAACCAGTTGGGAACTATGGGGTAAGGATCCTTTTTGACGATTTGCATAGAACTGGGA
TTTATTCGTGGGATTATTTCTTTCATCTTGGGAGCAACAAATTCACTCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCATGGGCTGAGCCGAGATCCACCAAAGAGA
AAATGA
mRNA sequenceShow/hide mRNA sequence
GTGATAGCAAACTTGGAGGCAAAATTGTCTTTTAGACTAATTCCAACCATATCAGACTAAATCCGGTCCCTTTGAGATTAATGTAGTTGCTCCCACTGGCCAAAAGGGCA
GGCGCCATATTTCAAGGCAATCAACTTCCTCCAAAGGGCTGAGTTTTACTTATGAAATCTCCAAACCATCGACAAGGAAATATTTTTCTGTTCTAGATTTGTAATCTACT
TCCATTAGAGCCTGGTTTTCTTCTCATTCAAGATTGTGTGTACCTCCCTTCTCTTTGTTGCCCTTCTACTCAAGAAGTTTCAAAATAGCCTCCCAATGGAAGCCGAAATC
TTTGTGGTTGTAGGAAAAAGGGATAAATAATAAATCGGTTGGTTGGCTTAGATTGCTTGAGAGTAATGTGACCCCTTTTAGAAATCTGTATGTCTCCAAGGATTAAACTG
GACCCATGGCAGCAATGCAGGATTTTCAGAGCCTGTAGATGTGTGGGAGCAGATTGATGCATGTGGTAGAGAGGGGGATGTTTGCTAGGAATGGGGGAAAGTACACCAAG
CTTGGTAAGAGGGTTAGGTACTGCACTGATACAATTGCCTTTGCGCAGCTCTGTGGCACAGTTTTGATGGAGCTGGTGCAGTTTGTGTGGGGGAATAGCTATTGGATTTG
GGCAAGTCATAAAGGCAAAGCCACTTCTTTGGGAGTGCGCGCATGTGTTAGAACTCCAACAAGATTTGTGGTATTTTGCGTTGGGTCCACTACAAAAAATGGGTTGATTT
GTACTACCAAAGGACGAAGTAAAAGACAGCAAGGTTGATCCTAGAGTCTCCCAAGGATCGAGCCGACATGTGTTATCTTGTATACTTCAAAATTTTGGAAAGGTTGCCTG
TCATAAAATTTGTTGAAAATGGGTGTACATTATATTTGTAGCTTTGGTACTTATTTGTAGATACGCTCTGTTCTTTCGTCACAAGTTGGTTAGGACTATAACTTGCTTTA
GAAGTTGATTTTACTGAATGTTGTCATGTGTTATTATACTCGTGATTGTGAATATGGTTTTTTTCTTTTTCCTATTCACTGTTTACTATGTTGCAGTTCACTGAATGCTT
CACTTTCAGGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAGTTCTTGAGAGTATATAGTCCAGCTGCTGATGCTAAAATCCGGTCAATTGGGGG
TGAAAAGGTAATCTCTGGACGACGTCATGTAGGTATTATGTCTGCTGAACCAGTTGGGAACTATGGGGTAAGGATCCTTTTTGACGATTTGCATAGAACTGGGATTTATT
CGTGGGATTATTTCTTTCATCTTGGGAGCAACAAATTCACTCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCATGGGCTGAGCCGAGATCCACCAAAGAGAAAATGA
TGGACAAATCAACTGTCTCCAACCACGAACATCACGAACATCGTATGCAAGATAATCATTGAGTGTTTGGGTCAACTGACAAACTCCTTGAAGAAATCATGCAACAATTA
GATTGGTTTGAAAAAATAAGGCAAGCTGTCTCAGTACTGGCTGATGAAAAAGATTCAACTGTTATACTAGGCAACGAAAAGAATTTTCTTAGTTTTCTGTTTCAAATTTT
ACCTATAAGCTATATGCTTCTAAGAACCTGAGCGTGAAAAATAGACATGTTGCTATAGCTCCTTGCTAGATTATCTAATGAATCGTGTTAAATTATCATTTCAACGGTTT
CATTATGCCCATGAAATATTTTGTTGTCTTTATCACTAGC
Protein sequenceShow/hide protein sequence
MLHFQVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLSRDPPKR
K