; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G25870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G25870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDUF1713 domain-containing protein
Genome locationChr3:23193962..23197986
RNA-Seq ExpressionCSPI03G25870
SyntenyCSPI03G25870
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsIPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056277.1 DUF1713 domain-containing protein [Cucumis melo var. makuwa]3.4e-5994.62Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ LIRKSPP+RLIAALGAQTSQNLSTPFILHQPLDFDKK DAH HSN+NSASTSNPS FSQFYPSFPFGLCLPQISSTGLLPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]7.1e-65100Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
KAG7017804.1 hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-5587.69Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_011651574.1 uncharacterized protein LOC101220058 [Cucumis sativus]7.1e-65100Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_023526336.1 uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo]5.1e-5586.92Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEPD VEQD+SRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
TrEMBL top hitse value%identityAlignment
A0A0A0LDP0 DUF1713 domain-containing protein3.5e-65100Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A5A7UNU9 DUF1713 domain-containing protein1.7e-5994.62Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ LIRKSPP+RLIAALGAQTSQNLSTPFILHQPLDFDKK DAH HSN+NSASTSNPS FSQFYPSFPFGLCLPQISSTGLLPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1EJL0 uncharacterized protein LOC1114351918.3e-5182.31Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MAS+LQ LIRKSPPTR IAAL +QTSQNLS P+ILHQPLD D+KPD HC SN+N+ STSNPS FS F+PSFPFGLCL QISSTG + FEPD VE DDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1F832 uncharacterized protein LOC1114417232.5e-5586.92Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSNPSHFS FYPSFPFG CLPQISS+G+LPFEP+ VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1J7I5 uncharacterized protein LOC1114824611.5e-5284.62Show/hide
Query:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK
        MASMLQ L+RKS PTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STS+ SHF  FYPSFPFG CLPQISS+G+LPFEPD VEQDDSRK
Subjt:  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63150.1 unknown protein1.7e-0844.09Show/hide
Query:  KKPDAHCHSN-INSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCV--EQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +KPD    +N + + S +  +   +FYPSF  GLCL      GL   E   +  E++D+++  ++ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  KKPDAHCHSN-INSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCV--EQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCATGCTTCAAAATCTCATTAGAAAATCGCCACCCACGAGATTAATTGCTGCTTTGGGTGCTCAGACCTCACAAAATCTCTCAACACCCTTCATTCTTCACCA
GCCCCTTGATTTTGATAAGAAACCAGATGCACATTGCCATTCTAATATAAACTCTGCTTCTACTTCGAATCCGTCTCATTTTTCCCAGTTTTACCCTAGTTTTCCATTTG
GGCTTTGCTTGCCCCAAATCTCCTCTACTGGGTTGCTTCCGTTCGAGCCCGATTGTGTTGAGCAAGACGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGG
AAACGCAAGATGAACAAGCATAAGTATAAGAAGCTAAGGAAGCGGCTCCGAAGACAGACATAG
mRNA sequenceShow/hide mRNA sequence
GTGAAATTTTCACCCAAAAAAAAAAGAAAAGAAAAAACCAAATTTACTCAACTCCGTCTGATCTCCTTAGGGTTTTGAGGAGCTGTTTATTCTCCTCCTTCTGCTGAGTT
CGCTTCTCTTTTTCATTCCCAAAGTATTCTACGTAAGGCATACAGCTTCATTCAGTTTCCAAAGCCTTCCCTCTTATTCAATGGCGTCCATGCTTCAAAATCTCATTAGA
AAATCGCCACCCACGAGATTAATTGCTGCTTTGGGTGCTCAGACCTCACAAAATCTCTCAACACCCTTCATTCTTCACCAGCCCCTTGATTTTGATAAGAAACCAGATGC
ACATTGCCATTCTAATATAAACTCTGCTTCTACTTCGAATCCGTCTCATTTTTCCCAGTTTTACCCTAGTTTTCCATTTGGGCTTTGCTTGCCCCAAATCTCCTCTACTG
GGTTGCTTCCGTTCGAGCCCGATTGTGTTGAGCAAGACGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGCAAGATGAACAAGCATAAGTATAAG
AAGCTAAGGAAGCGGCTCCGAAGACAGACATAGTTAATTCATTTGCAATTTTGATCAGGTTGCTGCTGATGGGACTTGAGAGGTCAGGAAGAGACTCTTCTTCCCCCACA
GACAAATTGATATGTTTGTGTATTTTCTTAGTTGAACAATTCTTGACCGTTTGAATTTGCTACCGAAACAATCAACTTGAAGTATTAAGCTTGAAATGGAAAGACATGTT
GATGAAAAATATCGATATGATTGTCTTTGATGAGATTCAAGAAGAGTAATTGGACTAAAATAAATTATAGTGAATACACAAGAAAAGGAAGAAAAAGTAAAAAGGGGAAA
TATCACTTCATTCAACAGCATTGTATGGCTTCATGATGTAAAACATAACATGTTCTAAGTTCCTTCTCAGACAATTGTACTCTTTGAGCAACAGCTAACTTCACAGGGAG
ACCACTTGATGCTAGAGAGCTTAATTCTCTAATTGTTCATCAATTCTTTT
Protein sequenceShow/hide protein sequence
MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKKR
KRKMNKHKYKKLRKRLRRQT