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CSPI03G25960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G25960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationChr3:23264667..23264930
RNA-Seq ExpressionCSPI03G25960
SyntenyCSPI03G25960
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]3.3e-2190.91Show/hide
Query:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        V VD+DLKNFPVL+AEFS+QFPGNGVWR+GLRRMEEKNLKDMNEKWVLLHIEGAE
Subjt:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

KAE8637412.1 hypothetical protein CSA_023389, partial [Cucumis sativus]1.6e-3192.31Show/hide
Query:  MTTGQCETSKPNTRIVDKRVGVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        MTTGQCETS+PNTRIVDK  GV VDVDVDLKNFPVLLAE SRQF GNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
Subjt:  MTTGQCETSKPNTRIVDKRVGVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]9.2e-1680.39Show/hide
Query:  VDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        VDL +FPVLL+EFSR+FPGNGVW++GLR MEEK+L+DMNEKWVLLHIE AE
Subjt:  VDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]9.2e-1657.69Show/hide
Query:  GQCETSKPNTRIVDKRV---GVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        G+    +   +++ +R+    V     VDLKNFPVL++EFSRQFPGNGVWR+GL+ MEE +LK MNEKWVLLHIE AE
Subjt:  GQCETSKPNTRIVDKRV---GVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]1.1e-2194.55Show/hide
Query:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        V VDVDLKNFPVL+AEFSRQFPGNGVWRDGLRRM EKNLKDMNEKWVLLHIEGAE
Subjt:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

TrEMBL top hitse value%identityAlignment
A0A059DA76 Uncharacterized protein3.2e-0655.1Show/hide
Query:  DLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGA
        DL +FP L+ E  R FPGNGVWR+GL+R+EE  L+ +NE+ V L +E A
Subjt:  DLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGA

A0A0A0KAX7 Uncharacterized protein5.4e-2294.55Show/hide
Query:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        V VDVDLKNFPVL+AEFSRQFPGNGVWRDGLRRM EKNLKDMNEKWVLLHIEGAE
Subjt:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

A0A0A0LBY9 Uncharacterized protein9.2e-38100Show/hide
Query:  MTTGQCETSKPNTRIVDKRVGVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        MTTGQCETSKPNTRIVDKRVGVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
Subjt:  MTTGQCETSKPNTRIVDKRVGVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like1.6e-2190.91Show/hide
Query:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE
        V VD+DLKNFPVL+AEFS+QFPGNGVWR+GLRRMEEKNLKDMNEKWVLLHIEGAE
Subjt:  VDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAE

A0A6P5ZW34 probable transcription factor At1g617303.2e-0646.55Show/hide
Query:  DLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAEHCIVIKSA
        DL  FP L+AEFSR  P N VW++ ++ +EE+ LK M+++WVL+ +E A+  +V K A
Subjt:  DLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAEHCIVIKSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTGGTCAGTGTGAAACCAGTAAGCCTAATACTCGAATAGTTGACAAACGGGTTGGGGTTGATGTTGATGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTCT
GGCTGAATTTTCTCGGCAATTTCCAGGGAATGGGGTGTGGAGGGATGGGCTGAGGAGAATGGAAGAAAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATA
TTGAAGGGGCTGAGCATTGTATTGTTATTAAATCAGCATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTGGTCAGTGTGAAACCAGTAAGCCTAATACTCGAATAGTTGACAAACGGGTTGGGGTTGATGTTGATGTTGATGTTGATCTGAAGAACTTTCCTGTTCTTCT
GGCTGAATTTTCTCGGCAATTTCCAGGGAATGGGGTGTGGAGGGATGGGCTGAGGAGAATGGAAGAAAAGAATTTGAAGGATATGAATGAGAAATGGGTTTTGTTGCATA
TTGAAGGGGCTGAGCATTGTATTGTTATTAAATCAGCATGGTGA
Protein sequenceShow/hide protein sequence
MTTGQCETSKPNTRIVDKRVGVDVDVDVDLKNFPVLLAEFSRQFPGNGVWRDGLRRMEEKNLKDMNEKWVLLHIEGAEHCIVIKSAW