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CSPI03G26000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G26000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationChr3:23308563..23310319
RNA-Seq ExpressionCSPI03G26000
SyntenyCSPI03G26000
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3094.12Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+N SR EENYQYSPMKKWFCCF
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

KAG6588926.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2888.73Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAK+N    EENYQYSPMKKWFCC
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC

KGN58221.1 hypothetical protein Csa_017629 [Cucumis sativus]2.6e-3297.14Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        + DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]4.9e-3195.65Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AK+NTSR EENYQYSPMKKWFCCF
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]4.9e-3195.65Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AK+NTSR EENYQYSPMKKWFCCF
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein1.3e-3297.14Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        + DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

A0A2P5B5J0 RIN4, pathogenic type III effector avirulence factor Avr cleavage site1.5e-2274.36Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN---TAAKDNTS---RQEENYQYSPMKKWFCCF
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G+       DN S   +  E Y Y PMKKWFCCF
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN---TAAKDNTS---RQEENYQYSPMKKWFCCF

A0A5D3E371 RPM1-interacting protein 4-like1.2e-27100Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPM
        SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPM
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPM

A0A5J5AK52 AvrRpt-cleavage domain-containing protein6.3e-2477.63Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAK-DNTSRQEENYQYSPM-KKWFCCF
        M SQDKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A  PG  + K DNTS+Q ENYQY PM KKWFCCF
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAK-DNTSRQEENYQYSPM-KKWFCCF

A0A5J5BYY8 AvrRpt-cleavage domain-containing protein1.5e-2270Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNTAAKDNTSRQEENYQYSPM-KKWFCCF
        M+SQDKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A        G    K++ S+Q ENYQYSPM KKWFCCF
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNTAAKDNTSRQEENYQYSPM-KKWFCCF

SwissProt top hitse value%identityAlignment
O22633 Protein NOI43.9e-1557.97Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      KKW CC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC

Q8GYN5 RPM1-interacting protein 45.7e-0639.44Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNTAAKDNTSRQEENYQYSPMKKWFCCF
        S +K   +PKFG+WD NNP+SA+G+T IF+K R+E+ S     G++    + S +  N   S      CCF
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNTAAKDNTSRQEENYQYSPMKKWFCCF

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.1e-1656.72Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC
        DKGRPLPKFGEWDVN+P+SAEGFTVIF+KAR+EKK      +    +    +       P KKWFCC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCC

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein2.5e-1763.38Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA--KDNTSRQEENYQYSPMKKWFCCF
        Q + RPLPKFGEWDVN+PASAEGFTVIF+KARD+KK+N A G  A+  +DN   Q+E     P KK FCCF
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA--KDNTSRQEENYQYSPMKKWFCCF

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.0e-1581.4Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.1e-1657.14Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+   +++ +      +      KKW CC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN--TAAKDNTSRQEENYQYSPMKKWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein4.8e-1651.95Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA----PGNTAAKDNTSRQEENYQYSPM-----KKWFC
        +++KG+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK+ +A    P +  +       ++N  +S        KWFC
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA----PGNTAAKDNTSRQEENYQYSPM-----KKWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGCAGGATAAAGGTCGCCCCTTGCCGAAGTTTGGCGAGTGGGATGTCAACAACCCAGCATCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGA
GAAGAAGTCAAATGAGGCTCCTGGGAACACAGCAGCAAAAGATAATACATCCAGACAAGAAGAAAATTATCAATATTCTCCCATGAAGAAATGGTTTTGTTGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
AGTTAAGAAAGGGGGGCTTAAAATGGAGTTACCAAAATACTCGGCTTCTGTTATTCCCATTTTAGCTTCCAACACCCCATTCTCCCTCTTTCCTTCCCTCTTCCTTCTCT
CTCTCTCACTTTTCATTTTCTGTGCAGAAAGCTTTGTTAATGTATTTTAATGGCTTCGCAGGATAAAGGTCGCCCCTTGCCGAAGTTTGGCGAGTGGGATGTCAACAACC
CAGCATCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTCCTGGGAACACAGCAGCAAAAGATAATACATCCAGACAAGAA
GAAAATTATCAATATTCTCCCATGAAGAAATGGTTTTGTTGTTTCTGAAACTGCTAGGGAGTGACGATGGTGGCAGCGACAACAGACATGGTGAAAGAAGGCTAAAGAAA
AGATTGATGAGTGAGATGCAGAATCAAGTAGGAGATGTGATGGTCTATTTCCTCTCTCTCCCTTCACACTCTCTCTCTCTCTCTCTCTGTACCTCTTACTATATATGCAA
AATATAGAATACAAAAATTTTCATGACATGCATATAGAAGTTGGGCGGTGGTTATAGCTCTCTGTAAGTTTCGCTCTAATAGAAACTTTTT
Protein sequenceShow/hide protein sequence
MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKDNTSRQEENYQYSPMKKWFCCF