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CSPI03G26120 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G26120
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslocon-associated protein subunit beta
Genome locationChr3:23402520..23404552
RNA-Seq ExpressionCSPI03G26120
SyntenyCSPI03G26120
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145695.1 translocon-associated protein subunit beta [Cucumis sativus]2.6e-77100Show/hide
Query:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
        MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
Subjt:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL

Query:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

XP_008450004.1 PREDICTED: translocon-associated protein subunit beta [Cucumis melo]1.2e-7497.32Show/hide
Query:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA
        PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA
Subjt:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA

Query:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        KS+GMFHGSPAV+TFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

XP_022935419.1 translocon-associated protein subunit beta isoform X1 [Cucurbita moschata]5.8e-6991.16Show/hide
Query:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS
        +IHLL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+
Subjt:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS

Query:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        +GMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

XP_023528715.1 translocon-associated protein subunit beta [Cucurbita pepo subsp. pepo]5.8e-6991.16Show/hide
Query:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS
        +IHLL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+
Subjt:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS

Query:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        +GMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

XP_038894726.1 translocon-associated protein subunit beta [Benincasa hispida]7.6e-6988.59Show/hide
Query:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA
        PP+IHLL A LF+SSTIATSDVPFIVAHKKASLTRLKSG ERVSVSIDIYN+GSSTAYD SLNDASWP DMFDIVSGETS SWERLDAGGH+SHSFELEA
Subjt:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA

Query:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        K++G+FHGSPA+ITFRVPTKSALQEALSTPILPLD+LAD+PPEKK EWV
Subjt:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

TrEMBL top hitse value%identityAlignment
A0A0A0LBA3 Translocon-associated protein subunit beta1.3e-77100Show/hide
Query:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
        MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
Subjt:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL

Query:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

A0A1S3BNZ1 Translocon-associated protein subunit beta5.8e-7597.32Show/hide
Query:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA
        PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA
Subjt:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA

Query:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        KS+GMFHGSPAV+TFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

A0A5D3DTY4 Translocon-associated protein subunit beta5.8e-7597.32Show/hide
Query:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA
        PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA
Subjt:  PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEA

Query:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        KS+GMFHGSPAV+TFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  KSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

A0A6J1FAK9 Translocon-associated protein subunit beta2.8e-6991.16Show/hide
Query:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS
        +IHLL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+
Subjt:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS

Query:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        +GMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

A0A6J1J7C6 Translocon-associated protein subunit beta1.4e-6890.48Show/hide
Query:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS
        +IHLL A LF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+
Subjt:  MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS

Query:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
        +GMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV
Subjt:  RGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV

SwissProt top hitse value%identityAlignment
P23438 Translocon-associated protein subunit beta1.0e-0729.91Show/hide
Query:  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSALQEALST
        K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A +T+       +    ++
Subjt:  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSALQEALST

Query:  PILPLDVLADRPPEKKF
              +LA R  +++F
Subjt:  PILPLDVLADRPPEKKF

P43308 Translocon-associated protein subunit beta1.0e-0737.21Show/hide
Query:  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITF
        K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A IT+
Subjt:  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITF

Q5E9E4 Translocon-associated protein subunit beta1.7e-0729.08Show/hide
Query:  LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGM
        L FA L L +     +   ++A  K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+    +VSH+  L     G 
Subjt:  LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGM

Query:  FHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKF
        F+ + A +T+       +    ++      +LA R  +++F
Subjt:  FHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKF

Q9CPW5 Translocon-associated protein subunit beta1.0e-0737.21Show/hide
Query:  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITF
        K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A IT+
Subjt:  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITF

Arabidopsis top hitse value%identityAlignment
AT5G14030.1 translocon-associated protein beta (TRAPB) family protein7.6e-5164.43Show/hide
Query:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
        +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS EL
Subjt:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL

Query:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE
        EAK +G+F+G+PAV+TFR+PTK ALQEA STP+LPLD+LAD+PP K  +
Subjt:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE

AT5G14030.2 translocon-associated protein beta (TRAPB) family protein7.6e-5164.43Show/hide
Query:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
        +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS EL
Subjt:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL

Query:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE
        EAK +G+F+G+PAV+TFR+PTK ALQEA STP+LPLD+LAD+PP K  +
Subjt:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE

AT5G14030.3 translocon-associated protein beta (TRAPB) family protein7.6e-5164.43Show/hide
Query:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
        +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS EL
Subjt:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL

Query:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE
        EAK +G+F+G+PAV+TFR+PTK ALQEA STP+LPLD+LAD+PP K  +
Subjt:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE

AT5G14030.4 translocon-associated protein beta (TRAPB) family protein7.6e-5164.43Show/hide
Query:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL
        +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L D SW    F++V+G TS SWERLDAGG +SHS EL
Subjt:  MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFEL

Query:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE
        EAK +G+F+G+PAV+TFR+PTK ALQEA STP+LPLD+LAD+PP K  +
Subjt:  EAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCCTCCTATGATCCATCTCCTCTTCGCTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCCTTCATTGTCGCCCACAAGAAGGCCTCCCTCACCCG
CCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGT
TTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCTGGTGGCCATGTGTCTCATTCATTTGAATTGGAAGCAAAATCAAGAGGAATGTTTCATGGT
TCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAA
GTTTGAGTGGGTAAGTTTATCCCCATTCCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
GTTTGTGTTTGTGTGTTGAGCATAATGACAAGATTACCCCTGTTGAAATTCCTTCCTGGGGGGTTCTAAAAAATCCCCATCATATGTTCTCTTCACCGTTCCACATTTTT
GCGTACCTAATTTATCTGACGCCTCCTTCTCCCAAACTCCCTTTCCGATCATCTCTCTCGCCCTAATTCCGACCACTTCATGGCCCCTCCTATGATCCATCTCCTCTTCG
CTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCCTTCATTGTCGCCCACAAGAAGGCCTCCCTCACCCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTC
TCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTC
GTGGGAAAGACTTGATGCTGGTGGCCATGTGTCTCATTCATTTGAATTGGAAGCAAAATCAAGAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTA
CGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGTTTATCCCCATTCCTT
GAATGACTTTTCCATTTCAAGCTTAATGATTTA
Protein sequenceShow/hide protein sequence
MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHG
SPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVSLSPFLE