; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G26160 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G26160
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase
Genome locationChr3:23458326..23459449
RNA-Seq ExpressionCSPI03G26160
SyntenyCSPI03G26160
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64427.1 hypothetical protein VITISV_029384 [Vitis vinifera]2.2e-9149.25Show/hide
Query:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG
        +EG+LF   +LC+P TSLR+ ++ E H GG+ GHFG+DKT   +  R++WP L++D    IK+C  CQ  KGS  NTGLY+PLP+P+  WEDLS+DFV+G
Subjt:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG

Query:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD----------------------------AEFAFNNMKNRAT
        LP+TQR +DS+ VVVDRFSKMAHFI CKK +DA Y+A LFF+E+VRLHG+P++IVSDRD                            AEFAFN+  NR T
Subjt:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD----------------------------AEFAFNNMKNRAT

Query:  NRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGP
           PFEV Y  +P+   DL  LPT V  + + +    +I  +H++V + +  + E+YK+ AD  RR   F +GDLVM+ LR  RF   TY KL+ K+ GP
Subjt:  NRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGP

Query:  FRILKKVGENAYKIELPPNMHIHPVFNVADLKQYY
        FR+LK++GENAY +ELP N+H  P+FNV DL  Y+
Subjt:  FRILKKVGENAYKIELPPNMHIHPVFNVADLKQYY

CAN79321.1 hypothetical protein VITISV_018984 [Vitis vinifera]2.2e-9149.25Show/hide
Query:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG
        +EG+LF   +LC+P TSLR+ ++ E H GG+ GHFG+DKT   +  R++WP L++D    IK+C  CQ  KGS  NTGLY+PLP+P+  WEDLS+DFV+G
Subjt:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG

Query:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD----------------------------AEFAFNNMKNRAT
        LP+TQR +DS+ VVVDRFSKMAHFI CKK +DA Y+A LFF+E+VRLHG+P++IVSDRD                            AEFAFN+  NR T
Subjt:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD----------------------------AEFAFNNMKNRAT

Query:  NRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGP
           PFEV Y  +P+   DL  LPT V  + + +    +I  +H++V + +  + E+YK+ AD  RR   F +GDLVM+ LR  RF   TY KL+ K+ GP
Subjt:  NRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGP

Query:  FRILKKVGENAYKIELPPNMHIHPVFNVADLKQYY
        FR+LK++GENAY +ELP N+H  P+FNV DL  Y+
Subjt:  FRILKKVGENAYKIELPPNMHIHPVFNVADLKQYY

RVW25953.1 Transposon Ty3-I Gag-Pol polyprotein [Vitis vinifera]1.7e-9149.4Show/hide
Query:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG
        +EG+LF   +LC+P TSLR+ ++ E H GG+ GHFG+DKT   +  R++WP L++D    IK+C  CQ  KGS  NTGLY+PLP+P+  WEDLS+DFV+G
Subjt:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG

Query:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD---------------------------AEFAFNNMKNRATN
        LP+TQR +DS+ VVVDRFSKMAHFI CKK +DA Y+A LFF+E+VRLHG+P++IVSDRD                           AEFAFN+  NR T 
Subjt:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD---------------------------AEFAFNNMKNRATN

Query:  RCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPF
          PFEV Y  +P+   DL  LPT V  + + +    +I  +H++V + +  + E+YK+ AD  RR   F +GDLVM+ LR  RF   TY KL+ K+ GPF
Subjt:  RCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPF

Query:  RILKKVGENAYKIELPPNMHIHPVFNVADLKQYY
        R+LK++GENAY +ELP N+H  P+FNV DL  Y+
Subjt:  RILKKVGENAYKIELPPNMHIHPVFNVADLKQYY

RVW41931.1 Transposon Ty3-I Gag-Pol polyprotein [Vitis vinifera]1.7e-9149.4Show/hide
Query:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG
        +EG+LF   +LC+P TSLR+ ++ E H GG+ GHFG+DKT   +  R++WP L++D    IK+C  CQ  KGS  NTGLY+PLP+P+  WEDLS+DFV+G
Subjt:  MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVG

Query:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD---------------------------AEFAFNNMKNRATN
        LP+TQR +DS+ VVVDRFSKMAHFI CKK +DA Y+A LFF+E+VRLHG+P++IVSDRD                           AEFAFN+  NR T 
Subjt:  LPKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD---------------------------AEFAFNNMKNRATN

Query:  RCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPF
          PFEV Y  +P+   DL  LPT V  + + +    +I  +H++V + +  + E+YK+ AD  RR   F +GDLVM+ LR  RF   TY KL+ K+ GPF
Subjt:  RCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPF

Query:  RILKKVGENAYKIELPPNMHIHPVFNVADLKQYY
        R+LK++GENAY +ELP N+H  P+FNV DL  Y+
Subjt:  RILKKVGENAYKIELPPNMHIHPVFNVADLKQYY

TXG62763.1 hypothetical protein EZV62_009757 [Acer yangbiense]2.8e-9146.72Show/hide
Query:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL
        EG+LF G QLCIP +SLRE L++E H GGL GH G+DKT   +++RYYWPQL+RD  NF+++C + Q +KG + NTGLY PLP+P +IWEDL++DFV+GL
Subjt:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL

Query:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD------------------------------------------
        P+TQR  DSV VVVDRFSKM HFI C+KT+DA ++A LFFRE+VRLHGVP++I SDRD                                          
Subjt:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD------------------------------------------

Query:  -------------------AEFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA
                           AEFA+NN  + AT + PF +VY + P+   DLA LP V  ++  AE M E +  +  EV   L +    YK  AD KRR+ 
Subjt:  -------------------AEFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA

Query:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQY
         F++GD VM+ LRK RFP G+YNKLK ++ GP++++KK+  NAY I+LP NM+I   FNVADL ++
Subjt:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQY

TrEMBL top hitse value%identityAlignment
A0A2N9F1X7 Uncharacterized protein5.9e-9548.65Show/hide
Query:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL
        EG+LF+G  LC+P TSLRE L+++ H GGL GH G+DKT  ++ +RYYWPQL+RD  N +++C  CQ +KG S NTGLY PLPIP  IWEDLS+DFV+GL
Subjt:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL

Query:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD------------------------------------------
        P+TQR  DSV VVVDR+SKM HFI C+KT+DA +IA LFFRE+V+LHGVP++I SDRD                                          
Subjt:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD------------------------------------------

Query:  -------------------AEFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA
                           AEFA+N+  + AT R PF VVY K P+ T DL  LP V  ++  AE M E ++ +  EV   L QTT  YK  ADK RR  
Subjt:  -------------------AEFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA

Query:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYAPD
         F +GD VM+ LRK RFP GTYNKLK K+ GP+++LKK+ +NAY I+LP +M I   FNVADL  Y+A +
Subjt:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYAPD

A0A2N9IIB5 Reverse transcriptase1.3e-9453.56Show/hide
Query:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL
        EG+LF+G +LC+P TSLRE L+++ H GGL GH G+DKT  ++ +RYYWPQL+RD+ + +++C  CQ +KG S NTGLY PLPIP  IWEDLS+DFV+GL
Subjt:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL

Query:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEFAFNN--------------MKNRATNRCPFEVVYTKQPRL
        P+TQR  DSV VVVDR+SKM HFI C+KT+DA +IA LFFRE+V+LHGVP++I SD   E   +N              +      R PF VVY K P+ 
Subjt:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEFAFNN--------------MKNRATNRCPFEVVYTKQPRL

Query:  TFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIE
        T DL  LP V  ++  AE M E ++ +  EV   L QTT  YK  ADK RR   F +GD VM+ LRK RFP GTYNKLK K+ GP++ILKK+ +NAY I+
Subjt:  TFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIE

Query:  LPPNMHIHPVFNVADLKQYYAPD
        LP +M I   FNVADL  Y+A +
Subjt:  LPPNMHIHPVFNVADLKQYYAPD

A0A5B7BER3 Uncharacterized protein5.6e-10150Show/hide
Query:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL
        +G+LFKG QLCIP TSLRE +L++ HSGGL GH G+DKT   + +RYYWPQL+RD   F+++CPICQ AKG + NTGLY+PLP+P  IWEDL++DF++GL
Subjt:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL

Query:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDA-----------------------------------------
        P+TQR  DSV VVVDRFSKMAHFI CKKT+DA ++ANLFFREIVRLHGVPK+I SDRD                                          
Subjt:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDA-----------------------------------------

Query:  --------------------EFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA
                            EFA+N M NR+T + PFE+VYTK P+   DLA LP +   +  AE   +    + +EV  +L +    YK  ADK RR  
Subjt:  --------------------EFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA

Query:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYAPD
         F++GDLVM+ LRKNRFP GTYNKLK+++ GPFR+ +K+ +NAY +ELP +M I   FNVADL +Y+ PD
Subjt:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYAPD

A0A6N2LGG3 Uncharacterized protein2.7e-9550.74Show/hide
Query:  LFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGLPKT
        LF+G QLC+P +SLRE L++E H GGL+GH G+DKT  ++++RYYWPQL+RD  N +++C +CQ +KG + NTGLY PLP+P +IWEDLS+DFV+GLP+T
Subjt:  LFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGLPKT

Query:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD---------------------------------AEFAFNNMKNRA
        QR  DSV VVVDRFSKM HFI C+KT+DA ++A+LFFRE+VRLHGVP++I SDRD                                 AEFA+NN  + A
Subjt:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD---------------------------------AEFAFNNMKNRA

Query:  TNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLG
        T R PF +VY K P+   DLA LP +   +  AE + E+   +  EV   L +    YK  AD KRR+  F++GD VM+ LRK RFP GTYNKLK  + G
Subjt:  TNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLG

Query:  PFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYA
        P++I+KK+ +NAY ++LP +MHI   FNVADL ++ A
Subjt:  PFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYA

A0A6N2LVR1 Uncharacterized protein8.9e-9948.92Show/hide
Query:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL
        +G+LF+G QLCIP +SLRE ++ E H GGL GH G+DKT     +RYYWPQL+RD  N +KRCP CQ +KG + NTGLY PLPIP   WEDLS+DF++GL
Subjt:  EGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGL

Query:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD------------------------------------------
        P+TQR  DSV VVVDRFSKMAHFIACKKT+DA+++ANLFF+E+VRLHGVPK+I SDRD                                          
Subjt:  PKTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRD------------------------------------------

Query:  -------------------AEFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA
                           AEFA+N+M NR+T + PF+VVY + P+   DL  LP +  +N  AE M + +  + +EV  +L  + E YK  ADKKRR  
Subjt:  -------------------AEFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQA

Query:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYAPD
         F +GDLVM++LRK R P GT +KL DK+ GP++IL+K+ +NAY+++LP +M I P FNVADL +Y+ PD
Subjt:  GFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYAPD

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.2e-2928.8Show/hide
Query:  EQLCIPH-TSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPL-PIPTS--IWEDLSVDFVVGLPKT
        +Q+ +P+ T L   ++K+ H  G   H G +     I +R+ W  +R+    +++ C  CQ  K  S N   Y PL PIP S   WE LS+DF+  LP++
Subjt:  EQLCIPH-TSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPL-PIPTS--IWEDLSVDFVVGLPKT

Query:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEF------------------------------------------
           Y+++ VVVDRFSKMA  + C K+  A   A +F + ++   G PK I++D D  F                                          
Subjt:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEF------------------------------------------

Query:  -------------------AFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQ-AGF
                           ++NN  + AT   PFE+V+   P L+     LP+  D  DE  +  E I+ + + V +HL       KK  D K ++   F
Subjt:  -------------------AFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQ-AGF

Query:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMH--IHPVFNVADLKQYYAPDSFNLA
          GDLVM+   K  F     NKL     GPF +L+K G N Y+++LP ++       F+V+ L++Y      N A
Subjt:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMH--IHPVFNVADLKQYYAPDSFNLA

P0CT41 Transposon Tf2-12 polyprotein3.2e-2928.8Show/hide
Query:  EQLCIPH-TSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPL-PIPTS--IWEDLSVDFVVGLPKT
        +Q+ +P+ T L   ++K+ H  G   H G +     I +R+ W  +R+    +++ C  CQ  K  S N   Y PL PIP S   WE LS+DF+  LP++
Subjt:  EQLCIPH-TSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPL-PIPTS--IWEDLSVDFVVGLPKT

Query:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEF------------------------------------------
           Y+++ VVVDRFSKMA  + C K+  A   A +F + ++   G PK I++D D  F                                          
Subjt:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEF------------------------------------------

Query:  -------------------AFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQ-AGF
                           ++NN  + AT   PFE+V+   P L+     LP+  D  DE  +  E I+ + + V +HL       KK  D K ++   F
Subjt:  -------------------AFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQ-AGF

Query:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMH--IHPVFNVADLKQYYAPDSFNLA
          GDLVM+   K  F     NKL     GPF +L+K G N Y+++LP ++       F+V+ L++Y      N A
Subjt:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMH--IHPVFNVADLKQYYAPDSFNLA

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein4.9e-3830.14Show/hide
Query:  LFKGEQLCIPHTSLREALLKEAHSGGL-AGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNT-GLYSPLPIPTSIWEDLSVDFVVGLP
        ++  ++L +P    + A+++  H   L  GHFG   T   IS  YYWP+L+     +I+ C  CQ  K       GL  PLPI    W D+S+DFV GLP
Subjt:  LFKGEQLCIPHTSLREALLKEAHSGGL-AGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNT-GLYSPLPIPTSIWEDLSVDFVVGLP

Query:  KTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAE-----------------------------------------
         T    + ++VVVDRFSK AHFIA +KT DA  + +L FR I   HG P+TI SDRD                                           
Subjt:  KTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAE-----------------------------------------

Query:  ---FAFNNMKNRATNRCPFEVVYTKQPRLT-------FDLATLPTVVDINDEAE---------KMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGF
           +   N++N        E VY   P  T        DL  LP    I  + E         ++ ++++ L  +  + L       +   +++R+    
Subjt:  ---FAFNNMKNRATNRCPFEVVYTKQPRLT-------FDLATLPTVVDINDEAE---------KMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGF

Query:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYY
        + GD V++H R   F  G Y K++   +GPFR++KK+ +NAY+++L  +   H V NV  LK  Y
Subjt:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYY

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.2e-3930.46Show/hide
Query:  LFKGEQLCIPHTSLREALLKEAHSGGL-AGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNT-GLYSPLPIPTSIWEDLSVDFVVGLP
        ++  ++L +P    + A+++  H   L  GHFG   T   IS  YYWP+L+     +I+ C  CQ  K       GL  PLPI    W D+S+DFV GLP
Subjt:  LFKGEQLCIPHTSLREALLKEAHSGGL-AGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNT-GLYSPLPIPTSIWEDLSVDFVVGLP

Query:  KTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAE-----------------------------------------
         T    + ++VVVDRFSK AHFIA +KT DA  + +L FR I   HG P+TI SDRD                                           
Subjt:  KTQRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAE-----------------------------------------

Query:  ---FAFNNMKNRATNRCPFEVVYTKQPRLT-------FDLATLPTVVDINDEAE---------KMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGF
           +A  N++N        E VY   P  T        DL  LP    I  + E         ++ ++++ L  +  + L       +   +++R+    
Subjt:  ---FAFNNMKNRATNRCPFEVVYTKQPRLT-------FDLATLPTVVDINDEAE---------KMIENIERLHKEVYDHLMQTTESYKKTADKKRRQAGF

Query:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQY-YAPDSF
        + GD V++H R   F  G Y K++   +GPFR++KK+ +NAY+++L  +   H V NV  LK++ Y PD++
Subjt:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQY-YAPDSF

Q9UR07 Transposon Tf2-11 polyprotein3.2e-2928.8Show/hide
Query:  EQLCIPH-TSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPL-PIPTS--IWEDLSVDFVVGLPKT
        +Q+ +P+ T L   ++K+ H  G   H G +     I +R+ W  +R+    +++ C  CQ  K  S N   Y PL PIP S   WE LS+DF+  LP++
Subjt:  EQLCIPH-TSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPL-PIPTS--IWEDLSVDFVVGLPKT

Query:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEF------------------------------------------
           Y+++ VVVDRFSKMA  + C K+  A   A +F + ++   G PK I++D D  F                                          
Subjt:  QRLYDSVMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEF------------------------------------------

Query:  -------------------AFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQ-AGF
                           ++NN  + AT   PFE+V+   P L+     LP+  D  DE  +  E I+ + + V +HL       KK  D K ++   F
Subjt:  -------------------AFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYDHLMQTTESYKKTADKKRRQ-AGF

Query:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMH--IHPVFNVADLKQYYAPDSFNLA
          GDLVM+   K  F     NKL     GPF +L+K G N Y+++LP ++       F+V+ L++Y      N A
Subjt:  SQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMH--IHPVFNVADLKQYYAPDSFNLA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTTTTCTATTCAAAGGGGAACAACTATGCATACCTCACACCTCATTACGAGAAGCCCTATTAAAGGAAGCTCACTCGGGTGGTCTGGCTGGACATTTCGGGCA
AGACAAAACATTCGAGACAATTTCCAAGAGGTATTATTGGCCACAACTCAGGAGAGATTCAAACAATTTCATTAAAAGATGTCCTATATGCCAAAGAGCTAAAGGCTCAA
GTACTAATACTGGGTTATACTCTCCACTGCCCATCCCAACTTCTATTTGGGAAGACTTATCAGTAGACTTCGTGGTAGGATTACCAAAGACTCAAAGGCTCTATGACTCG
GTCATGGTTGTAGTAGACAGATTCAGTAAAATGGCCCACTTCATTGCGTGCAAAAAGACGAATGATGCAATCTATATAGCCAATCTGTTTTTCAGAGAAATAGTACGCCT
ACATGGAGTACCAAAAACAATTGTGTCTGATCGGGATGCCGAGTTTGCATTCAACAATATGAAGAATAGAGCAACTAACAGATGCCCATTCGAAGTTGTATATACTAAAC
AACCACGATTAACGTTTGACCTTGCCACACTCCCTACAGTCGTGGACATTAATGATGAAGCTGAAAAGATGATTGAGAACATTGAAAGACTGCATAAAGAAGTATATGAT
CACTTAATGCAAACAACAGAATCCTATAAGAAAACAGCTGATAAGAAAAGAAGACAAGCTGGCTTTTCCCAAGGAGACTTAGTAATGATCCACCTTCGAAAGAATCGATT
CCCCACTGGCACATACAATAAACTCAAAGACAAACAACTTGGTCCATTCCGTATCCTAAAGAAAGTTGGAGAAAATGCCTACAAGATAGAACTACCACCAAACATGCATA
TTCACCCAGTCTTTAACGTGGCAGACTTAAAGCAATACTATGCTCCAGATAGTTTCAACTTAGCAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTTTTCTATTCAAAGGGGAACAACTATGCATACCTCACACCTCATTACGAGAAGCCCTATTAAAGGAAGCTCACTCGGGTGGTCTGGCTGGACATTTCGGGCA
AGACAAAACATTCGAGACAATTTCCAAGAGGTATTATTGGCCACAACTCAGGAGAGATTCAAACAATTTCATTAAAAGATGTCCTATATGCCAAAGAGCTAAAGGCTCAA
GTACTAATACTGGGTTATACTCTCCACTGCCCATCCCAACTTCTATTTGGGAAGACTTATCAGTAGACTTCGTGGTAGGATTACCAAAGACTCAAAGGCTCTATGACTCG
GTCATGGTTGTAGTAGACAGATTCAGTAAAATGGCCCACTTCATTGCGTGCAAAAAGACGAATGATGCAATCTATATAGCCAATCTGTTTTTCAGAGAAATAGTACGCCT
ACATGGAGTACCAAAAACAATTGTGTCTGATCGGGATGCCGAGTTTGCATTCAACAATATGAAGAATAGAGCAACTAACAGATGCCCATTCGAAGTTGTATATACTAAAC
AACCACGATTAACGTTTGACCTTGCCACACTCCCTACAGTCGTGGACATTAATGATGAAGCTGAAAAGATGATTGAGAACATTGAAAGACTGCATAAAGAAGTATATGAT
CACTTAATGCAAACAACAGAATCCTATAAGAAAACAGCTGATAAGAAAAGAAGACAAGCTGGCTTTTCCCAAGGAGACTTAGTAATGATCCACCTTCGAAAGAATCGATT
CCCCACTGGCACATACAATAAACTCAAAGACAAACAACTTGGTCCATTCCGTATCCTAAAGAAAGTTGGAGAAAATGCCTACAAGATAGAACTACCACCAAACATGCATA
TTCACCCAGTCTTTAACGTGGCAGACTTAAAGCAATACTATGCTCCAGATAGTTTCAACTTAGCAGACTAA
Protein sequenceShow/hide protein sequence
MEGFLFKGEQLCIPHTSLREALLKEAHSGGLAGHFGQDKTFETISKRYYWPQLRRDSNNFIKRCPICQRAKGSSTNTGLYSPLPIPTSIWEDLSVDFVVGLPKTQRLYDS
VMVVVDRFSKMAHFIACKKTNDAIYIANLFFREIVRLHGVPKTIVSDRDAEFAFNNMKNRATNRCPFEVVYTKQPRLTFDLATLPTVVDINDEAEKMIENIERLHKEVYD
HLMQTTESYKKTADKKRRQAGFSQGDLVMIHLRKNRFPTGTYNKLKDKQLGPFRILKKVGENAYKIELPPNMHIHPVFNVADLKQYYAPDSFNLAD