CuGenDBv2

Gene ID	CSPI03G26450
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Vesicle transport protein
Genome location	Chr3:23849771..23853822
RNA-Seq Expression	CSPI03G26450
Synteny	CSPI03G26450
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0016192 - vesicle-mediated transport (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR007305 - Vesicle transport protein, Got1/SFT2-like IPR011691 - Vesicle transport protein SFT2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004145710.1 vesicle transport protein SFT2B [Cucumis sativus]

6.7e-55

99.14

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Query:  MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATA
        MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATA
Subjt:  MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATA

Query:  IYLGCVVLALICALWV
        IYLGCVVLALICALW+
Subjt:  IYLGCVVLALICALWV

XP_008441622.1 PREDICTED: vesicle transport protein SFT2B [Cucumis melo]

8.5e-50

92.31

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Query:  MWKLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKLS+GVFV DEERSQSLLDEDSEDLCSLT VQRLYAFGGCLTGGVVCMILSLLVFAKPLK AVLF FGNVLAVGST FLFGP QQIRMMFDSVRI AT
Subjt:  MWKLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVLALICALW+
Subjt:  AIYLGCVVLALICALWV

XP_022141325.1 vesicle transport protein SFT2B isoform X3 [Momordica charantia]

3.3e-46

86.32

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Query:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKLS GVF  DEER QSLLDEDSEDLCSL+ VQRLY FG CLTGGVVCM+LSLLVFAKP+K AVLF FGNVLAVGST FLFGP QQIRMMFDSVRI AT
Subjt:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVLALICALW+
Subjt:  AIYLGCVVLALICALWV

XP_022945270.1 vesicle transport protein SFT2B [Cucurbita moschata]

5.3e-44

84.62

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Query:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKL  GVF  DEER QSLLDEDSEDLCSLT VQRLY FGGCLTGGVVCMI+SLLVFAKP+K A LF FGNVLAVGST FLFGP QQ+RMMFDSVRI AT
Subjt:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVLALICAL +
Subjt:  AIYLGCVVLALICALWV

XP_038880533.1 vesicle transport protein SFT2B [Benincasa hispida]

6.1e-48

89.74

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Query:  MWKLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKLS GVFV DEE  QSLLDEDSEDLCSLT VQRLYAFGGCLTGGVVCMILSLLVFAKPLK AVLF FGNVLAVGST FLFGP QQIRMMFDSVRI AT
Subjt:  MWKLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVL LICALW+
Subjt:  AIYLGCVVLALICALWV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LC39 Vesicle transport protein

3.2e-55

99.14

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Query:  MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATA
        MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATA
Subjt:  MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATA

Query:  IYLGCVVLALICALWV
        IYLGCVVLALICALW+
Subjt:  IYLGCVVLALICALWV

A0A1S3B3W0 Vesicle transport protein

4.1e-50

92.31

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Query:  MWKLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKLS+GVFV DEERSQSLLDEDSEDLCSLT VQRLYAFGGCLTGGVVCMILSLLVFAKPLK AVLF FGNVLAVGST FLFGP QQIRMMFDSVRI AT
Subjt:  MWKLSEGVFV-DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVLALICALW+
Subjt:  AIYLGCVVLALICALWV

A0A6J1CHR6 Vesicle transport protein

1.6e-46

86.32

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Query:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKLS GVF  DEER QSLLDEDSEDLCSL+ VQRLY FG CLTGGVVCM+LSLLVFAKP+K AVLF FGNVLAVGST FLFGP QQIRMMFDSVRI AT
Subjt:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVLALICALW+
Subjt:  AIYLGCVVLALICALWV

A0A6J1G0G6 Vesicle transport protein

2.6e-44

84.62

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Query:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKL  GVF  DEER QSLLDEDSEDLCSLT VQRLY FGGCLTGGVVCMI+SLLVFAKP+K A LF FGNVLAVGST FLFGP QQ+RMMFDSVRI AT
Subjt:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVLALICAL +
Subjt:  AIYLGCVVLALICALWV

A0A6J1HVF1 Vesicle transport protein

2.6e-44

84.62

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Query:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT
        MWKL  GVF  DEER QSLLDEDSEDLCSLT VQRLY FGGCLTGGVVCMI+SLLVFAKP+K A LF FGNVLAVGST FLFGP QQ+RMMFDSVRI AT
Subjt:  MWKLSEGVF-VDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILAT

Query:  AIYLGCVVLALICALWV
        AIYLGCVVLALICAL +
Subjt:  AIYLGCVVLALICALWV

SwissProt top hits

e value

%identity

Alignment

O95562 Vesicle transport protein SFT2B

2.0e-09

34.23

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Query:  LLDEDSEDLCSLTAV---------QRLYAFGGCLTGGVVCMILSLLVFAKPLK----LAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLG
        L  +D+ED   L+ V          R+  F  C   G++C +L  ++   P K     AV + FGN+ ++GST FL GP +Q++ MF+  R++AT + L 
Subjt:  LLDEDSEDLCSLTAV---------QRLYAFGGCLTGGVVCMILSLLVFAKPLK----LAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLG

Query:  CVVLALICALW
        C  L L  A W
Subjt:  CVVLALICALW

Q5SSN7 Vesicle transport protein SFT2A

1.1e-07

41.49

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Query:  DLCSLTAVQRLYAFGGCLTGGVVCMIL--SLLVFAKPLKL-AVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALW
        D  SL+   RL  F  C   G+    L   LL     +KL AV +  GN+ A+ ST FL GP +Q++ MF++ R+LAT I L C+V  L  ALW
Subjt:  DLCSLTAVQRLYAFGGCLTGGVVCMIL--SLLVFAKPLKL-AVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALW

Q5U3Y5 Vesicle transport protein SFT2A

4.9e-08

42.55

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Query:  DLCSLTAVQRLYAFGGCLTGGVVCMIL--SLLVFAKPLKL-AVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALW
        D  SL+   RL  F  C   G+   IL   LL     +KL AV +  GN+ A+ ST FL GP +Q++ MF++ R+LAT I L C+V  L  ALW
Subjt:  DLCSLTAVQRLYAFGGCLTGGVVCMIL--SLLVFAKPLKL-AVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALW

Q8VD57 Vesicle transport protein SFT2B

5.8e-09

34.82

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Query:  LLDEDSEDLCSLTAV---------QRLYAFGGCLTGGVVCMILSLLVFAKPLK----LAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLG
        L  +D+ED   L+ V          R+  F  C   G++C +L  L+   P K     AV +  GN++++GST FL GP +Q++ MF+  R++AT + L 
Subjt:  LLDEDSEDLCSLTAV---------QRLYAFGGCLTGGVVCMILSLLVFAKPLK----LAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLG

Query:  CVVLALICA-LW
        C  L L  A LW
Subjt:  CVVLALICA-LW

Q8WV19 Vesicle transport protein SFT2A

1.4e-07

41.49

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Query:  DLCSLTAVQRLYAFGGCLTGGVVCMIL--SLLVFAKPLKL-AVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALW
        D  SL+   RL  F  C   GV   IL   LL     +KL AV +  GN+ A+ ST FL GP +Q++ MF++ R+LAT + L C +  L  ALW
Subjt:  DLCSLTAVQRLYAFGGCLTGGVVCMIL--SLLVFAKPLKL-AVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALW

Arabidopsis top hits

e value

%identity

Alignment

AT5G23550.1 Got1/Sft2-like vescicle transport protein family

3.2e-23

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Query:  DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLAL
        DEE S S + ED    C+LT  QR Y F  CL+ G+ C +LS+LVF  P+K  + F  GN++A+GST FL GP++Q+ MM D  RI ATA+YL  +++AL
Subjt:  DEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLAL

Query:  ICALWV
         CAL+V
Subjt:  ICALWV

AT5G24170.1 Got1/Sft2-like vescicle transport protein family

9.7e-28

57.84

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Query:  SQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICAL
        + S L++ SE LC+L+  QR+Y F   L  G++ M LS++VF  P+K A+LF FGNVLA+GST FL GP QQ+ MMFD VR LAT+IY+GCVV+ALICAL
Subjt:  SQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICAL

Query:  WV
         +
Subjt:  WV

Sequences

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CDS sequence

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ATGTGGAAGCTCAGCGAAGGCGTATTTGTCGATGAAGAGCGTAGTCAGAGCTTGTTGGATGAAGATTCAGAAGACCTATGCTCTCTAACTGCTGTACAGAGACTGTACGC
TTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTTGTCATTACTTGTTTTTGCTAAGCCACTCAAACTTGCTGTACTTTTTGCATTTGGCAATGTTTTGGCAG
TTGGAAGCACAACTTTCCTATTTGGACCTAGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTCTTGCGACAGCTATTTACCTAGGATGTGTTGTTCTAGCTCTT
ATATGTGCTCTCTGGGTAAGTCACTATTCTGACTATATGACATATACAAGAAAGCGGACTTAA

mRNA sequence

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TCAATCACGATTCCCCTGGTCGACACAAGACAACGTGAGCTGAACCCCAATCCTGAATTCCTTTCAAAATGTGGAAGCTCAGCGAAGGCGTATTTGTCGATGAAGAGCGT
AGTCAGAGCTTGTTGGATGAAGATTCAGAAGACCTATGCTCTCTAACTGCTGTACAGAGACTGTACGCTTTTGGAGGCTGCTTGACCGGGGGCGTGGTTTGCATGATTTT
GTCATTACTTGTTTTTGCTAAGCCACTCAAACTTGCTGTACTTTTTGCATTTGGCAATGTTTTGGCAGTTGGAAGCACAACTTTCCTATTTGGACCTAGGCAACAAATAA
GAATGATGTTTGATTCTGTTCGTATTCTTGCGACAGCTATTTACCTAGGATGTGTTGTTCTAGCTCTTATATGTGCTCTCTGGGTAAGTCACTATTCTGACTATATGACA
TATACAAGAAAGCGGACTTAAATTGCTAATGCATTAAGGTATTCAATGAACAATCTTCAATTAATCT

Protein sequence

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MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPLKLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLAL
ICALWVSHYSDYMTYTRKRT

CSPI03G26450 (gene) of Cucumber (PI 183967) v1 genome